Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1305 ATGGCCCTTGAAAAAATTGGTTTGTGGTTACTGCTGATAGCATCTTTTCAATTGTTCATTAAAGTAGAGTGTATTAACGTGGGGATTACTTATGTTCAAGAAGCTGGTGCCAAAGGAGCTGTTTGTTTGGATGGAAGCCCTCCGGCTTACCACTTGAGCGATGGATTTGGTTCCGGGGTCGACAATTGGTTGATTCAACTTGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGCCTTGCGCGCCGAGACAACCGTCTAGGTTCATCTAAGAGCATGGTCACAGAACTTGCATTCTCTGGAATTTTGAGCAACAAACCACAATTCAATCCAGATTTTTACAACTGGAATAGAATCAAGGTTAGGTACTGTGATGGATCTTCTTTCACTGGAGATGTAGAAGCAGTCGATCCAGCCACTAATCTGCATTTCAGAGGAGCAAGGGTTTTTCGTGCTGTCATCTACAACCTACTCGCGAAAGGAATGAAAAATGCAAAGAATGCCGTTCTCTCGGGTTGTTCGGCGGGTGGATTAGGTTCTATTTTGCAATGTGATAACTTCAAAGCTCTACTTCCTCCTACTACTAAAGTAAAATGCTTTTCAGATGCAGGATATTTCATCAATGTGAATGATGTTTCTGGAGCACAACATATTGAAACCTTCTTTAGTGAAGTAGTGACCACTCATGGTTCTGCAAAGAATCTGCCGATATCATGTACTTCAAAAATGAAGCCGGGGTTGTGTTTCTTTCCCCAAAATATGGTACAGAATATAAAGACTCCACTCTTTCTTATCAATGCAGCTTATGATTCATGGCAGATAAAGAACATTTTGGCGCCCGGTGTTGCTGATCCACACGGCACTTGGCACGACTGCAAGCTTGACATAAAAAACTGCTCACCCGTTCAGCTTAGACTCATGCAAGACTTCAGGTTGAAGTTTTTAAGTGCATTGAACGGCCTTGGAAGCCTTATATCAAGAGGATTGTTCATAGATTCTTGTTATGCCCACTGCCAAACTGAAATGCAAGAGACATGGTTAAGGAACGACTCTCCGATGCTAAATAAGATACCCATTGCAAAGGCAGTTGGAGACTGGTATTTCGACCGAAGCCCGTTCCAGAAGATCGATTGTCCTTACCCTTGCAATCCCACCTGCCATAACCGCATTTTCGAGTCAAAGAACCTCCTGGAATAA 1197 43.11 MALEKIGLWLLLIASFQLFIKVECINVGITYVQEAGAKGAVCLDGSPPAYHLSDGFGSGVDNWLIQLEGGGWCNNVTTCLARRDNRLGSSKSMVTELAFSGILSNKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAVIYNLLAKGMKNAKNAVLSGCSAGGLGSILQCDNFKALLPPTTKVKCFSDAGYFINVNDVSGAQHIETFFSEVVTTHGSAKNLPISCTSKMKPGLCFFPQNMVQNIKTPLFLINAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPVQLRLMQDFRLKFLSALNGLGSLISRGLFIDSCYAHCQTEMQETWLRNDSPMLNKIPIAKAVGDWYFDRSPFQKIDCPYPCNPTCHNRIFESKNLLE 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47221687 47224728 + evm.model.ptg000003l.487 HCH6g1305 546799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1305 398 Pfam Pectinacetylesterase 25 372 IPR004963 GO:0016787(InterPro)
HCH6g1305 398 PANTHER NOTUM-RELATED 24 388 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g1305 HCH-Chr6:47221687 HCH8g0014 HCH-Chr8:988028 1.80E-123 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1305 K19882 - csv:101214431 733.021