Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1306 ATGGACTGGTTATTCGTCCATAGAGCTTGGGAAAAATGGGCTTCAATAAGCGTTGGCTCCTTCGGTCATCCATTGAAAGCTGCTTTGTTGCTTAATTATGACCCAACTGGACCCTCCCGCTTGCTTTCTACCATTGCTGAACAAGAAGGACTAGCAGTCAATCCTATGGAATTGAATCAGTTTGTTGACTTCATCAAACGAGACAGACCACAAACTGAGAGTTTCAGCATTGGTTCAAATCAATACATAATGACAACAATTCATGAGAATTGGTTTTCTGCAAGGTGCATGAGCACCATAAAGCCTGCTGGTGAAGGTGTTATTGTTGTGCAAACGACAGCGTTTATTTTGGTTGCTCTGTATGATGGTTCTATCGCCGCAGCATCTCGCGCTATGGCGGCCGTTGATCAGTTTTCTTGGCAGTTAGGCAGGAAACATCTTTAG 444 43.92 MDWLFVHRAWEKWASISVGSFGHPLKAALLLNYDPTGPSRLLSTIAEQEGLAVNPMELNQFVDFIKRDRPQTESFSIGSNQYIMTTIHENWFSARCMSTIKPAGEGVIVVQTTAFILVALYDGSIAAASRAMAAVDQFSWQLGRKHL 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47225753 47228656 + evm.model.ptg000003l.486 HCH6g1306 546800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1306 147 PANTHER OS05G0241400 PROTEIN 1 146 - -
HCH6g1306 147 Gene3D Dynein light chain 2a, cytoplasmic 10 145 - -
HCH6g1306 147 SUPERFAMILY Profilin (actin-binding protein) 10 140 IPR036140 -
HCH6g1306 147 Pfam Profilin 43 141 IPR048278 GO:0003779(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1306 - - - 0.0