Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g1312 | ATGTTCTGTTTCTTGGCTTCTGTTGTTTTCATCTTCTTCTTCTTCTTCCTCCTCCTTCGTTCCTTTCTGAAATCCTCGGCTTTCACGAGCCGAAAACTTCCCCTTCCACCGGGTTCTATGGGTTGGCCTTATATGGGTGAAACCTTTCAACTCTATTCTCAAGATCCCAATGTCTTCTTTGCCTCCAAAAAGAAGAGATATGGTCCAATTTTCAAGTCTCACATATTGGGTTATCCATGTGTGATGATTTCAAGTCCTGAGGCTGTGAAGTTTGTGTTGGTGAACAAAGCTCATCTCTTTAAGCCTACATTTCCAGCGAGTAAAGAGAGGATGTTAGGCAAAAATGCAATTTTCTTTCACCAAGGAGACTATCATGCCAAATTGAGACGGCTCGTTCTTCGCGCTTTCATGCCCGAAGCGATCAGAAACATCGTCCCGAGTATCGAATCCATTGCTAAAGAAACTGTTCAATCATGGGAAGGCCAGTTGATCAACACCTTCCAAGAAATGAAGATGTTCGCATTCGATATTTCTTTGCTTTCAATATTTGGAAAAGACGAAGCTCTTTACAGAGAAGACTTGAAGCGATGCTACTACATTATCGAGAAAGGCTACAATTCTATGCCGATTAACTTGCCGGGAACACTCTTCCACAATGCCATGAAGGCAAGGAAAGAGTTGGCCCAGATCCTAGCTAAAATCCTCTCAACCAGGAGAGAGATGAAACACGACCACAATGACCTACTTGGATCTTTCATGGGGGAAAAGGAAGGCCTCACCGATGAACAAATCGCCGATAATGTTATCGGTATCATCTTCGCAGCCCGAGACACGACTGCAAGTGTTCTAACATGGATCTTGAAGTATCTTGGAGAGAACCCAAGTGTTCTTCAAGCTGTTACTGCTGAACAAGAAGCGATAAGAAAAGAAAAACAGAATGGGGAAGAAAATCTAACTTATGCAGATACCAAGAAGATGCCAATAACTTCAAGAGTAATTCAAGAAACTCTCAGAGTGGCCTCAGTTTTATCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATATGATGGCTATCTGATACCAAAAGGATGGAAAGTTTTGCCTCTTTTTAGAAACATTCATCACAGTCCAGAAATTTTTCCTCAACCAGAGAAGTTTGATCCATCAAGATTTGAGGCTGCTCAGAAGCCCAATACATACATGCCATTTGGCAATGGGACCCACTCATGTCCAGGGAATGAATTAGCCAAGCTGGAGATGCTGATTCTGCTCCATCATTTTACTACCAAGTACAGGTGGAGTGTGGTGGGTGAACAGGAAGGGATTCAGTATGGCCCATTTGCTCTTCCCCATAATGGACTGCCCATTAGAATCTCTCTCAAGAAGTAG | 1392 | 42.67 | MFCFLASVVFIFFFFFLLLRSFLKSSAFTSRKLPLPPGSMGWPYMGETFQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMISSPEAVKFVLVNKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRAFMPEAIRNIVPSIESIAKETVQSWEGQLINTFQEMKMFAFDISLLSIFGKDEALYREDLKRCYYIIEKGYNSMPINLPGTLFHNAMKARKELAQILAKILSTRREMKHDHNDLLGSFMGEKEGLTDEQIADNVIGIIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIRKEKQNGEENLTYADTKKMPITSRVIQETLRVASVLSFTFREAVEDVEYDGYLIPKGWKVLPLFRNIHHSPEIFPQPEKFDPSRFEAAQKPNTYMPFGNGTHSCPGNELAKLEMLILLHHFTTKYRWSVVGEQEGIQYGPFALPHNGLPIRISLKK | 463 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 47261063 | 47263271 | - | evm.model.ptg000003l.480 | HCH6g1312 | 546806 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g1312 | 463 | Coils | Coil | 297 | 317 | - | - | |
| HCH6g1312 | 463 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 404 | 413 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH6g1312 | 463 | Gene3D | Cytochrome P450 | 24 | 461 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | SUPERFAMILY | Cytochrome P450 | 29 | 459 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | P450 superfamily signature | 402 | 411 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | P450 superfamily signature | 274 | 291 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | P450 superfamily signature | 331 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | P450 superfamily signature | 411 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | FunFam | Abscisic acid 8 | 25 | 461 | - | - | |
| HCH6g1312 | 463 | PANTHER | CYTOCHROME P450 26 | 34 | 432 | - | GO:0004497(PANTHER)|GO:0009687(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| HCH6g1312 | 463 | Pfam | Cytochrome P450 | 36 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 370 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 283 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 263 | 280 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 411 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 401 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | PRINTS | E-class P450 group I signature | 330 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1312 | 463 | CDD | CYP90-like | 65 | 460 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH3g1387 | HCH-Chr3:51854404 | HCH6g1312 | HCH-Chr6:47261063 | 1.50E-152 | dispersed | |
| HCH5g0291 | HCH-Chr5:1760585 | HCH6g1312 | HCH-Chr6:47261063 | 8.70E-64 | dispersed | |
| HCH5g1149 | HCH-Chr5:38461898 | HCH6g1312 | HCH-Chr6:47261063 | 4.80E-22 | dispersed | |
| HCH6g0940 | HCH-Chr6:44195356 | HCH6g1312 | HCH-Chr6:47261063 | 6.60E-61 | dispersed | |
| HCH6g1312 | HCH-Chr6:47261063 | HCH7g0640 | HCH-Chr7:6303776 | 2.70E-152 | dispersed | |
| HCH6g1312 | HCH-Chr6:47261063 | HCH4g0644 | HCH-Chr4:4222083 | 5.90E-155 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH6g1312 | K09843 | - | csv:101212508 | 816.224 |