Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g1325 | ATGGCAATGGCTGCCACTTCCCTTTTGCATTTGCCTTCAGTTGCCATTCATGGAAATCTGCAGAATTTTGAATTTAGGTTTCTGGGTTTCTCAAAACAACCACCAATTTACTCTTCAACCACCTCCAAGCTTCTTAAATCCAATATCAGAGGTCCAGTTGTTAGATGTCAATCAACTAAAACTGATGAACCAAAAACACAAAGAAATCTGATTGACAATGCCAGCAACCTTCTTACCAATTTATTAAGTGGTGGAAGCTTGGGGTCTATGCCAATAGCTGAAGGTGCTGTCTCTGATTTGTTTGGACGGCCACTCTTCTTTTCACTATATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTGTCAGATCCCATTGTAGCAAGATATATTCTTCGAGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCAGCTGACCTTGATACTTGGAAGCAGAGGAGACGAGTTATTGCTCCAGGATTCCATGCCTTATACTTGGAAGCTATGATCAAAATATTTGTTGATTGTTCAGAACGAACAATACTAAAATTGGAGAAGCTTCTTGGGGAAGGTGAACAACATGAGGGTAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAATTTGGCCCTTGATATTATAGGGCTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCTCCAGTGATTAAGGCTGTATATGGAACTCTTTTTGAAGCAGAGCATAGATCCACTTTCTACATCCCATATTGGAAGGTACCTTTGGCTAGATGGATAGTCCCAAGGCAGCGTAAATTCCATAGTGACCTTCAGGTTATTAATGAATGTCTCGATGGCCTCATTCGAAATGCAAAAGAAACCAGAGAGGAAACAGATGTTGAGAAATTGCAGCAAAGGGACTACCTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTGGTTGATATGCGGGGAGCTGATGTTGATGATCGGCAGCTTAGGGATGATCTCATGACAATGCTTATTGCTGGCCATGAAACAACAGCTGCAGTGCTTACATGGGCTGTTTTTTTTCTTGCCCAAAATCCTTCAAAAATGAAAACAGCTCAAGCAGAGATTGATCTGGTTCTTGGTACAGAGAGGCCAACTTATGAATCACTTAAAGCATTGAAGTACATCAGACTTATTATTGCAGAAACTCTTCGGTTGTTTCCTCAGCCACCTTTGTTAATAAGGCGTGCCCTCAAATCAGATACATTACCAGGAGGGTACAATGGCGACAAAATTGGATACGCAATTCCCGCAGGGACCGACATCTTCATCTCTGTTTTTAATCTCCACAGATCTCCATACTTTTGGGATAATCCACTAGAATTTGAACCAGAAAGATTTCAGGTTAAGAAGGAAAGTGGAGGAATTGAAGGATGGGATGGTTTTGACCCATCTAGAAGCCCCGGAGCTTTGTACCCGAACGAGATAATAGCAGATTTTTCCTTCTTACCATTTGGTGGGGGGCCTAGAAAATGTGTTGGAGATCAATTTGCTCTAATGGAGTCAACCGTAGCATTGGCCATGTTGCTGCAGAAGTTTGATGTGGAACTAAAAGGATCTCCAGAATCTGTAGAACTAGTTACTGGCGCTACAATACATACCAAAAATGGGTTATGGTGCAAACTGAGAAGAAGATCCCAAGTGAATTGA | 1764 | 40.93 | MAMAATSLLHLPSVAIHGNLQNFEFRFLGFSKQPPIYSSTTSKLLKSNIRGPVVRCQSTKTDEPKTQRNLIDNASNLLTNLLSGGSLGSMPIAEGAVSDLFGRPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMIKIFVDCSERTILKLEKLLGEGEQHEGKTIELDMEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLQVINECLDGLIRNAKETREETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFFLAQNPSKMKTAQAEIDLVLGTERPTYESLKALKYIRLIIAETLRLFPQPPLLIRRALKSDTLPGGYNGDKIGYAIPAGTDIFISVFNLHRSPYFWDNPLEFEPERFQVKKESGGIEGWDGFDPSRSPGALYPNEIIADFSFLPFGGGPRKCVGDQFALMESTVALAMLLQKFDVELKGSPESVELVTGATIHTKNGLWCKLRRRSQVN | 587 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 47372815 | 47378801 | + | evm.model.ptg000003l.467 | HCH6g1325 | 546819 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g1325 | 587 | Pfam | Cytochrome P450 | 112 | 575 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 523 | 532 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH6g1325 | 587 | CDD | CYP97 | 107 | 577 | - | - | |
| HCH6g1325 | 587 | PRINTS | E-class P450 group I signature | 373 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | E-class P450 group I signature | 353 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | E-class P450 group I signature | 530 | 553 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | E-class P450 group I signature | 113 | 132 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | E-class P450 group I signature | 520 | 530 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | SUPERFAMILY | Cytochrome P450 | 101 | 583 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | Gene3D | Cytochrome P450 | 90 | 587 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | P450 superfamily signature | 530 | 541 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | P450 superfamily signature | 521 | 530 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | P450 superfamily signature | 416 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PRINTS | P450 superfamily signature | 364 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1325 | 587 | PANTHER | CYTOCHROME P450 FAMILY 4 | 79 | 583 | IPR050196 | GO:0009507(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH6g1325 | HCH-Chr6:47372815 | HCH9g0539 | HCH-Chr9:3472918 | 9.00E-108 | dispersed | |
| HCH6g1325 | HCH-Chr6:47372815 | HCH8g0612 | HCH-Chr8:42926925 | 9.20E-36 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH6g1325 | K24543 | - | csv:101210292 | 1003.82 |