Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g1355 | ATGGATATGATCGGAGTGCCGTCGTGGGCGGCGGTGTTGTGGACGGTGGTGAGTGGGGGGGTGGCGGTGGCGGTGATATGGGGAGTGAAGAATGTGAACAAGTGGGTATATGAGAGAAAGTTAGGGGTAAAAAGGGAAAAGCTACCACCAGGAGATTTGGGATGGCCTTTCATTGGAAACATGTGGTACTTCCTCAGAGCTTTCAAGTCTAAGGATCCTGATTCTTTCATCTCCTCCTTTGTTTCCAGATATGGATGTACAGGTATTTACAAGGCTTTTATGTTCGGGAACCCGAGTGTGATTGTGACAACGCCAGAGATGTGCAAAAAAGTCTTGACCGACGACGATGCATTTCAGCCGGGGTGGCCTTCTTCCACCATAAAACTTATAGGGGAGAAGTCGTTTGTCAACATTTCTTTCCAAGAACACAAACGTCTCCGCCGCTTGACGTCTGCTCCTGTCAACGGCTATGAGGCATTGTCCATGTACTTGAAGTACATTGAAGAGAATGTTGTGTTTTCCTTGCTGAAGTGGGAGGACATGGGACAAATAGAGTTCTTAACCGAACTACGCAAGCTTACCTTTCAGATTATAATGTACATTTTCTTAAGCTCAGAGAGTGAGCCAGTAATGGAGGCTCTAGAGAAGGAATACACAAAACTTAATTATGGTGTAAGATCCATGGCAATCAATATTCCTGGTTTTGCATACCATAAGGCACTCAAGGCACGAAAAAATCTTGTGGCCACATTTCAATCCATTGTGAATGAGCGAAGGAGGGGAAGGAAGAATAACTCTTCAACAAAAAGGAGAGACATGATGGATGCTCTGTTAGATGTCAAAGATGAGAACGGTCGAAAGTTGACAGATGAAGAAATTATTGATGTTCTGATAATGTACTTGAATGCAGGCCATGAATCTTCTGGTCACACCATAATGTGGGCAACCGTTTTCCTACATCAACATCCTGAATTCCTTGAAAAAGCCAAGGCAGAGCAAGAAGAGATAGTAAGGAAAAGGCCTTCAGGGCAACAAGAATTAACTCTCAAGGAAATCCGAGACATGGACTATCTTTCAAAGGTGATTGATGAAACGCTACGCGTAGTAACATTCTCGCTCGTAGTTTTTCGGGAGGCAAAGCTCGACGTCAATATAAATGGATACACCATTCCAAAAGGATGGAAGACTCTAGTCTGGTTTAGAAGTGTTCACTTCGATCCCGAAATTTATCCGGACCCAAAAGTTTTCAATCCTTCAAGATGGGATGGGTTTACACCAAAAGCAGGGACATTTCTTCCTTTTGGAGCAGGAAGTAGGCTGTGTCCTGGAAATGATTTGGCAAAGCTAGAAATATCTGTTTTTCTCCACTATTTTCTCCTCAATTATCAGTTGGAGAGAGCTAATCCTAAATGCTCATTGATGTACTTGCCCCATACAAGACCTAAAGACAATTGCTTGGCTAGAGTCAAGAAAGTCACTGCTTCACTTGACTGA | 1494 | 43.44 | MDMIGVPSWAAVLWTVVSGGVAVAVIWGVKNVNKWVYERKLGVKREKLPPGDLGWPFIGNMWYFLRAFKSKDPDSFISSFVSRYGCTGIYKAFMFGNPSVIVTTPEMCKKVLTDDDAFQPGWPSSTIKLIGEKSFVNISFQEHKRLRRLTSAPVNGYEALSMYLKYIEENVVFSLLKWEDMGQIEFLTELRKLTFQIIMYIFLSSESEPVMEALEKEYTKLNYGVRSMAINIPGFAYHKALKARKNLVATFQSIVNERRRGRKNNSSTKRRDMMDALLDVKDENGRKLTDEEIIDVLIMYLNAGHESSGHTIMWATVFLHQHPEFLEKAKAEQEEIVRKRPSGQQELTLKEIRDMDYLSKVIDETLRVVTFSLVVFREAKLDVNINGYTIPKGWKTLVWFRSVHFDPEIYPDPKVFNPSRWDGFTPKAGTFLPFGAGSRLCPGNDLAKLEISVFLHYFLLNYQLERANPKCSLMYLPHTRPKDNCLARVKKVTASLD | 497 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 47571321 | 47576219 | - | evm.model.ptg000003l.437 | HCH6g1355 | 546849 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g1355 | 497 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 434 | 443 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH6g1355 | 497 | Gene3D | Cytochrome P450 | 39 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | FunFam | Ent-kaurenoic acid oxidase | 39 | 492 | - | - | |
| HCH6g1355 | 497 | SUPERFAMILY | Cytochrome P450 | 43 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | P450 superfamily signature | 432 | 441 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | P450 superfamily signature | 441 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PANTHER | CYTOCHROME P450 26 | 47 | 467 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| HCH6g1355 | 497 | Pfam | Cytochrome P450 | 49 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | E-class P450 group I signature | 431 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | E-class P450 group I signature | 441 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1355 | 497 | CDD | CYP90-like | 81 | 491 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH6g1355 | HCH-Chr6:47571321 | HCH7g0640 | HCH-Chr7:6303776 | 4.50E-68 | dispersed | |
| HCH5g0291 | HCH-Chr5:1760585 | HCH6g1355 | HCH-Chr6:47571321 | 1.80E-133 | wgd | |
| HCH6g1096 | HCH-Chr6:45600658 | HCH6g1355 | HCH-Chr6:47571321 | 5.90E-137 | wgd | |
| HCH6g1355 | HCH-Chr6:47571321 | HCH7g1495 | HCH-Chr7:47560376 | 6.20E-211 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH6g1355 | K04123 | - | cit:102629702 | 764.222 |