Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1501 ATGAGTGCACAAGTTGGAGTTCTTAGTGCACTTGATCTAGCAAAGACTCAATGGTATCATTTCACAGCAATTATCATTGCTGGTATGGGATTCTTCACTGACGCTTATGATCTCTTTTGCATTTCCATCGTCACCAAATTACTTGGCCGCATTTACTATTATCAAGGAGACCCTACAAGACCTGGTTCTCTTCCTCCCAACATCGCCGCCTCGGTCAACGGCGTTGCATTTTGCGGTACACTCGCCGGACAACTCTTCTTCGGTTGGCTTGGCGATAAGCTCGGCCGCAAGAAAGTCTACGGCATAACCCTTGTCCTCATGGTCGTTTGTTCTATCGCTTCTGGCCTCTCGTTCGGCGATTCTCCCAAGGGTGTTATCGCCACGTTATGTTTCTTTCGATTCTGGCTCGGCTTCGGTATCGGTGGAGATTATCCGCTTTCGGCTACTATTATGTCGGAATATGCTAATAAAAAGACTCGTGGGGCGTTCATTGCAGCTGTGTTTGCCATGCAAGGGTTTGGTATCTTGGCTGGTGGGATTGTAGCTTTGATTGTTGCTGGCGCTTTTAAAAATAGATTCTCTGCTCCGCCCTATATCGAAAACCACTTAGGCTCCACCGTGCCTGAAGCTGACTACGTATGGCGAGTTATTTTAATGTTTGGTGCAATTCCGGCTGCTCTTACGTATTACTGGCGAATGAAAATGCCTGAGACTGCGCGTTATACCGCGCTTGTTGCGAAAAATGCGAAACAAGCTGCGGCCGACATGTCGAAAGTTCTTCAAGTCGAATTGGAAGCGGAGGAAGAAAAGATAGAGAAAATGGTGGACGAGCCTAGTAATAGCTTTGGTTTGTTTTCTAGAAAATTTGCTAAACGTCATGGACTTCACTTATTAGGAACTACCACTACTTGGTTTTTACTTGACATTGCATTTTATAGTCAAAACCTTTTCCAAAAGGACATTTTCACAGCAATTGAATGGCTCCCACCTGCGGGGACGATGAACGCGCTCGAGGAATGTTTCAAGATTGCTCGAGCGCAGACGCTTATAGCCCTTTGCGGCACCGTTCCAGGATATTGGTTTACGGTTGCATTTATTGATTATGTTGGGAGATTCGCCATTCAGTTGATGGGGTTTATCATGATGACTATTTTCATGTTTGCTCTTGCTTTCCCTTACAATCATTGGAAGCAAAGGCCTCATCGGATCGGATTCGTAGTTATGTATTCTCTAACATTCTTCTTTGCGAACTTTGGACCGAACTCCACGACCTTCATTGTGCCAGCAGAGATTTTTCCTGCAAGGTTGAGGTCAACATGTCATGGAATATCTGCAGCTGCTGGGAAAGCTGGAGCTATTGTTGGAGCATTTGGGTTCTTGTATGCAGCACAGAGTAAAGATCCGGCATTGACCGATCCGGGGTACCCGACTGGAATTGGGGTGAAGAATGCTTTGATTGTGCTGGGTTGTGTTAATTTCTTGGGAGCTTTGTTTACTCTGTTGGTGCCGGAATCCAAGGGGAAATCGCTTGAGGAGTTAACTGGTGAAAATGAGGAAGAAAGTGGAGGGGTATGA 1575 45.84 MSAQVGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYYQGDPTRPGSLPPNIAASVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGITLVLMVVCSIASGLSFGDSPKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVAGAFKNRFSAPPYIENHLGSTVPEADYVWRVILMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEEEKIEKMVDEPSNSFGLFSRKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAGTMNALEECFKIARAQTLIALCGTVPGYWFTVAFIDYVGRFAIQLMGFIMMTIFMFALAFPYNHWKQRPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPALTDPGYPTGIGVKNALIVLGCVNFLGALFTLLVPESKGKSLEELTGENEEESGGV 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 48563235 48564809 - evm.model.ptg000003l.291 HCH6g1501 546995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1501 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857(InterPro)
HCH6g1501 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 512 - -
HCH6g1501 524 FunFam Inorganic phosphate transporter 1-6 19 524 - -
HCH6g1501 524 NCBIfam phosphate:H+ symporter 11 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
HCH6g1501 524 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
HCH6g1501 524 Gene3D MFS general substrate transporter like domains 272 524 IPR036259 -
HCH6g1501 524 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
HCH6g1501 524 CDD MFS_PhT 24 506 - -
HCH6g1501 524 Coils Coil 257 277 - -
HCH6g1501 524 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g1501 HCH-Chr6:48563235 HCH7g1330 HCH-Chr7:46208463 2.70E-236 dispersed
HCH11g1286 HCH-Chr11:44911437 HCH6g1501 HCH-Chr6:48563235 5.20E-187 transposed
HCH5g0092 HCH-Chr5:576271 HCH6g1501 HCH-Chr6:48563235 3.20E-237 wgd
HCH6g1501 HCH-Chr6:48563235 HCH7g1329 HCH-Chr7:46194749 7.90E-257 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1501 K08176 - csv:101212412 875.544