Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g1791 | ATGTATCATTTTCAGCAGGGTCTCTCTGACTCTATTCGTGTCAACTTCTACGATAAATTTTTGAGCATTTGTTTTGAAAAGCAAAAGAGGGCATTTTGGCTTCTACAAGAACAATTGAGGAACATGAGGGATAACTCCTCCGCATTGCTGTCATTGTTTGTTCCTATACTAGCAGTGTTCATTCTTTTCCTTGCTAAGACTTTGAAAAATCACAAGTATATAGCAGATCGGAGGGGATGCAGATTTCCTCCAGGAAGAAGAAGCTGGCCTGTAATAGGTGATAGCTTCAACTGGTACAATGCTGTTGCAAGTTCTCATCCCCCCAAGTATGTTGAAGAACAGGTTAAAAGGTATGGGAAAATCTTCTCGTGCAGTCTATTTGGAAAGTGGGCCGTGGTGTCCGCGGATCCACTGTTTAACCGTTATGTGATGCAAAACGAAGGGAAATTGTTCCAATCTAGCTACCCAAAATCTTTCAGAGATTTGGTAGGTTTAAATGGCGTTATTACAGTACAAGGGGAGCAACAAAAGAAACTGCATGCAATTGCCTCCAATATGATGCGTGTGGAAAAACTTAAGTTTCGTTTCCTTGAAGATATTCAAACCATCATGACTCGAACTCTTTGCAGTTTCCATGACGATCAAGTCATAAATCTCCAAGATGTTTGCAGAAAGGTAGCAATTAATCTGATGGTTAGTCAGCTATTTGGTGTGTCAACTGAATGTGAAGTTAATGAGATGAGTCGGTTATTTTATGACTTTGTTGATGGCTGTCTATCTATTCCGATCCACTTGCCAGGTTTTGCTTATTACACAGCCATGAAAGCAAGGGAGCAAATCATAAGGAAAATTAACGAGAAAATAGAGACGCACAAATCATTTGATGATGATCAAAGTAGAAAGGGAGTGCTTGGAAGACTACTAGAGGAGGAAAACTTAGCTGACGAAGCAGTAGCAGATTTCATTATCAATCTTCTTTTTGCTGGAAACGAGACAACTTCTAAAACAATGCTTTTCGCACTCTATTTCCTAACCCACTCTCCTAAAGCAATGAAGCAACTATTGGATGAACAAGCTACTTTAAAACATAAGTGTGGAGATAATATCATCACGTGGCAAGATTACAAAGCGATGTCCTTCACCCAGTGTGTTATTGATGAGACACTTCGACTTGGGGGAATTGCAATTTGGTTGATGAGGGAGGCAAAAGAAGATGTCAAATATCTAGACTACTTCATTCCGAAGGGATGCTTTGTGGTTCCATTTCTTTCGGCAATACATTTGGATGAGAACATATATAAGGGAGCTCTGACCTTCAACCCTTGGAGATGGATGGAACCAGAAAATCAAGAAATGAGGAATTGGCGAAGTAGTCCATTTTTTGCTCCTTTTGGAGGAGGTGCTAGATTTTGTCCAGGAGCAGAGTTGGCGCGCCTCCAGATTGCCTTGTTTCTCCATTACTTTGTTACAGAGTACAAGTGGATCCAACTTAAAGCAGACAAGATGTCATTCTTTCCCTCTGCTCGGCTCGTCAACGGCTTCCAAATTCGCTTGAAAAGATGCCAACACTAA | 1572 | 40.71 | MYHFQQGLSDSIRVNFYDKFLSICFEKQKRAFWLLQEQLRNMRDNSSALLSLFVPILAVFILFLAKTLKNHKYIADRRGCRFPPGRRSWPVIGDSFNWYNAVASSHPPKYVEEQVKRYGKIFSCSLFGKWAVVSADPLFNRYVMQNEGKLFQSSYPKSFRDLVGLNGVITVQGEQQKKLHAIASNMMRVEKLKFRFLEDIQTIMTRTLCSFHDDQVINLQDVCRKVAINLMVSQLFGVSTECEVNEMSRLFYDFVDGCLSIPIHLPGFAYYTAMKAREQIIRKINEKIETHKSFDDDQSRKGVLGRLLEEENLADEAVADFIINLLFAGNETTSKTMLFALYFLTHSPKAMKQLLDEQATLKHKCGDNIITWQDYKAMSFTQCVIDETLRLGGIAIWLMREAKEDVKYLDYFIPKGCFVVPFLSAIHLDENIYKGALTFNPWRWMEPENQEMRNWRSSPFFAPFGGGARFCPGAELARLQIALFLHYFVTEYKWIQLKADKMSFFPSARLVNGFQIRLKRCQH | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 50224219 | 50226642 | - | evm.model.ptg000003l.1 | HCH6g1791 | 547285 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g1791 | 523 | PRINTS | E-class P450 group IV signature | 471 | 489 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | E-class P450 group IV signature | 455 | 471 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | E-class P450 group IV signature | 427 | 445 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | E-class P450 group IV signature | 109 | 132 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | E-class P450 group IV signature | 378 | 394 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | E-class P450 group IV signature | 319 | 345 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | Gene3D | Cytochrome P450 | 73 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | SUPERFAMILY | Cytochrome P450 | 73 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | Pfam | Cytochrome P450 | 83 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | P450 superfamily signature | 462 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | P450 superfamily signature | 471 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g1791 | 523 | PANTHER | CYTOCHROME P450 26 | 81 | 492 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| HCH6g1791 | 523 | CDD | CYP90-like | 114 | 520 | - | - | |
| HCH6g1791 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 464 | 473 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH4g1474 | HCH-Chr4:11150924 | HCH6g1791 | HCH-Chr6:50224219 | 2.60E-73 | dispersed | |
| HCH6g1791 | HCH-Chr6:50224219 | HCH7g1495 | HCH-Chr7:47560376 | 1.30E-52 | dispersed | |
| HCH6g1791 | HCH-Chr6:50224219 | HCH1g0373 | HCH-Chr1:51158760 | 9.20E-80 | transposed |
Pathway information