Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0032 ATGGGGAAGAAAACTAATAAACAAAAGATCATTCTGCCGCCGGACCTTCCACCAGAGCTCGCCGATGAAGATATTGAAGTTTCCGACGAGGATTTACAATTTGTCAATCACAACAAAGACTATGCCGGTTTCGTTTCCAGTTTAGACACTAAATCCATTACCAAGCATGTTACGCGTGTTGCTGATGTTAAAGAAGATGCTTTGGAAGCCTTATATGAAAAACGTTTACGAAAAAAGTCATTGCAGAACCATGAGAAGGAGGAGGAAGAGCAAAAAAAGCTTCAGGTTCATCGTGTAGATGCCCTTCCTGTCAAAACACTTGATGGAAAACTCTATTTCCGAACATCGAAAACAGTTGAAAATGATCAGAGTAATGAGGAAATGGAGGAGGATCAGACTGATAAGAGTGGATTCAAGTTAACGAAAGCAGAAAGGAGAGCAAAACTTAAAAAAAGTAAGAAAGCTGGAAAGAAACAAGAGGAGTTAACCAAAGCTGAAGAAGTTCAACCAACCCCACAAGCTGCAGTTTTGGCCGAGGTGAAAGAAGATCTCACCGCTGAAAAGACATTTGAAAGTAAAAAGCAGAAACTTGCAGAACTTGGAATTGCACTGCTATCAGATCCAGACTCCAGTATTAAATCTTTGAAAGAGATGCTACAGCTGGCGAAGGACAATGATCATTCGATTGTGAAGCTTGGACTGCTTTCATTACTTGCGGTTTTTAAAGACATTATACCCGGTTATCGGATTAGGCTTCCAACTGAAAAGGAGCTAGAAATGAAAGTATCCAAGGATGTTAAGAAAATGCGGTTTTATGAATCTACTCTTCTTTCTTGTTATAAGGGATACTTGCAGAAATTAATATCATTAGAAAAGTCGACCTCGTTTCATCATGTGGCTATACGATGCATCTGTACTTTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACTTTGTTAGGTGTTGTTGTTAGAAACATTAGCTCCCCTGATGATATTGTAAGAGAACTCTGTTGTGGTGCAATCAAGTCCGTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCTACTGTGGAGGCTGTTCGATTGATTGCTAACCATGTGAAATCTCATGATTGTCTATTGCATCCTGATACCATGGAGCCTTTCAAGTATTTAACATTTGATGAGGATCTGGGGAGAGCGGCAAAGACAGATGAGAACAATAAAGCAAAGTATAAGAAAAGTAGGAAAGCAAAGAATCGTGAGGAATTAAGTAAATTGAAAGGGAATGATAGGAGACAAAGTAATCAAAAGCTGAGGACAGAGTTACAAGAAGAGGTTACTGCTGATTACAAGGCGGCTGCTCTTGCTCCAGATGTGATGAAGCGAAAAGAGATGCAGTCAGATGCACTTTCTGCCGTGTTTGAAACATACTTTCGGATCTTGAGGCACACAATGCTGTCAACAACCGCTGGATCTGAAGCAAATTCTACTGTATCTACTAGCGCATCTGGATCCCATCCATTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCGCATCTTATTGATCTAGATTTCATGGGTGATCTTATGAATTACCTGAAAAGGCTTGCTTCTGGTGGTGGTAATTCTGACTATTCTTTTGACAAAAAGTCAAAATATTTGACCGTGTCCGAGCGTCTACAGTGCTGCATTGTAGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTTTTTGTCCAGCTGTACAATATCCTACTCGAGTACAGGCCGGGAAGAGATCATGGTGAAGTGTTAGCTGAAGCTTTGAAGATAATGTTGTGTGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACGTTGTCATTATGCTTGGGATCTGCCGAGTCCTTGGCTGCCTTGGTCACTGTGAAGCACCTTCTTCAGAAAAATATCAAGTGTCGCAGTCTTTTGGAAAATGATGCTGGAGGAGGCTCGGTTTCTGGTTTAATTGTGAAATATCAGCCACATGTATCTGATCCAAATTTAAGTGGTGCCCTTGCATCTGTCCTTTGGGAACTTAATCTTCTGTCGAAGCATTATCATCCAACTGTCTCAACGATGACTGCTAGCATATCGAGCATGACCAATGCTCAAAACCAAGTTTATCTCTCCACTATTGCTCCTCAACAGGCTTTCAAGGACTTGTCTCTAGAACAAGAGTCGTTTAACCCACAATTTAACAGCAGAAAAGTCAACAAGAGGAAAAGAGCTGGAGAGGCTCCCCAGTCTACTACTTCATATACGAGTAGCGCCATTGATGAAGAAGACGAGGTGAAGGAGAAACTTTCAACTCGATTCCTTCTTCTTCGTGACATCAAGGACAATGAAAGACTACGGGCCGAGTTGGATCGTACCACCATGTCTTTGCAACTGTATGAAGAATACAAGAAGCAAAAGAAAAAGAAAAGGAAAACTAGCAAGTCTAGGAATATTTGA 2511 40.9 MGKKTNKQKIILPPDLPPELADEDIEVSDEDLQFVNHNKDYAGFVSSLDTKSITKHVTRVADVKEDALEALYEKRLRKKSLQNHEKEEEEQKKLQVHRVDALPVKTLDGKLYFRTSKTVENDQSNEEMEEDQTDKSGFKLTKAERRAKLKKSKKAGKKQEELTKAEEVQPTPQAAVLAEVKEDLTAEKTFESKKQKLAELGIALLSDPDSSIKSLKEMLQLAKDNDHSIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRFYESTLLSCYKGYLQKLISLEKSTSFHHVAIRCICTLLDAVPHFNFRETLLGVVVRNISSPDDIVRELCCGAIKSVFINEGKHGGEATVEAVRLIANHVKSHDCLLHPDTMEPFKYLTFDEDLGRAAKTDENNKAKYKKSRKAKNREELSKLKGNDRRQSNQKLRTELQEEVTADYKAAALAPDVMKRKEMQSDALSAVFETYFRILRHTMLSTTAGSEANSTVSTSASGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGGNSDYSFDKKSKYLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNILLEYRPGRDHGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATLSLCLGSAESLAALVTVKHLLQKNIKCRSLLENDAGGGSVSGLIVKYQPHVSDPNLSGALASVLWELNLLSKHYHPTVSTMTASISSMTNAQNQVYLSTIAPQQAFKDLSLEQESFNPQFNSRKVNKRKRAGEAPQSTTSYTSSAIDEEDEVKEKLSTRFLLLRDIKDNERLRAELDRTTMSLQLYEEYKKQKKKKRKTSKSRNI 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 227177 232994 + evm.model.ptg000013l.32 HCH7g0032 547317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0032 836 Pfam Nucleolar complex-associated protein 193 283 IPR011501 -
HCH7g0032 836 SUPERFAMILY ARM repeat 202 635 IPR016024 -
HCH7g0032 836 PIRSF Noc3 2 802 IPR016903 -
HCH7g0032 836 Pfam CBF/Mak21 family 558 712 IPR005612 -
HCH7g0032 836 MobiDBLite consensus disorder prediction 401 433 - -
HCH7g0032 836 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 782 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
HCH7g0032 836 MobiDBLite consensus disorder prediction 751 779 - -
HCH7g0032 836 MobiDBLite consensus disorder prediction 118 170 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0032 K14834 - csv:101213821 1165.98