Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0055 | ATGTTATGTGGAGGATTCTGGAAGGAGATTAAGGAGGGATTCTGGTTTTATCATCAGGAGCGGGGATTTAGTGTTCTGGGAATTGGGTTTTGGGAGATTGTTGAAATGCAGTCTGATTACCGCAGAAAGGGTTCAACGGAATTGGAATTTTTCTCTGAATATGGTGATGCCAACAGATTCAAAATTCAGGAAGTTGTTGGGAAGGGAAGTTATGGTGTGGTTTGTTCAGCAGTTGATACCCTCACTAATGAAAAAGTGGCAATAAAGAAGATACGTGATATTTTTGAACATATATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCTGATATTGTCGAAATTAAACACATTATTCTACCATCTTCTCGAAGGGACTTCAAAGATATTTTTGTTGTATTTGAGTTGATGGAATCAGATTTGCATCAAGTAATCAAAGCCAATGATGATTTAACGCGAGAGCACTATCAATTTTTCCTCTACCAGCTACTCCGTGCATTGAAATATATACACACAGCAAACGTTTACCACCGGGATTTGAAACCGAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTCGGATTAGCTAGGGTTGCTTTCAATGACGCCCCAACAACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTCTGTGGTTCTTTCTTCTCTAAGTATACCCCTGCCATTGATATTTGGAGTATCGGCTGCATATTTGCTGAAGTGCTCATTGGGAAGCCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACTGACCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAAAAGGCTAGGAGGTATCTAACTAGCATGAGGAAGAAGCAGCCCATACCCTTTTCACAAAAGTTTCCAAATGCAGATCCTCTAGCCCTGCGATTGCTAGAACGATTACTTGCTTTTGATCCGAAGGATCGACCTACCGCTGAAGAGGCATTAGCCGATCCTTATTTCAAGGGGCTGGCAAAAGTTGAAAGAGAACCTTCTTGCCAACCAATTTCAAAGATGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGAAGACATCCGAGAGCTAATATTTCGTGAGATACTAGAGTACCATCCTCAACTACTGAAAGATTACTTAAATGGAACTGAGAGAACAAATTTTCTTTATCCAAGTGCCATTGATCAGTTCAGAAAGCAATTCGCTCATCTTGAAGAAAACGAAGGGAAAAGTGGACCTGATTTTCCTCTTGAAAGAAAGCATGCATCTCTTCCTAGGTCCACAGTACATACAAATACCATAACTCCTAAGGAAACATCAGATGCCGTGTCATCTAAAGACCGATATGCTCCAGCAGGGTCGTACATCCAGCATTGTAAATATCTAGAACGACATTCTACAAATCTTGCAAGGATTTCACAAGCACCCCAGAGGATTGTTGCTACACAAGCCAAGCCTGGAAGAATTGTTGGCCCGGTTGTACCATATGAAAGAGGGGGTGTCGTGAAAGATGCCTACGATCCGAGAATATTTATTAGAAGCGCAGTCCCTTCTAATGCTGTCCATCCGACATATTATTACCGCCAACCCTGTGGCCAAAATCAAGAAACAGCAACAACAACGGGGGCGGAGCAGGACAATAATAAACAGGCCTCTCAATGTGGCATTACAGCGAAATTAGCGGAAGATACAGCAGCTAAGGGTGTTGTCTCGAATCCTTTTTTCATGACACGGGCAGGAGTGCCCAAGGTCGGACATAACGACCGTACTCCTGATTCGAAACTTTTGCAGGTAAATGCGCAATATGGTGTTGCGACCACGCACAAGAAAGTCGGAGCAGTCGAGTATGAATTGACGAGAATGCATTAA | 1938 | 42.11 | MLCGGFWKEIKEGFWFYHQERGFSVLGIGFWEIVEMQSDYRRKGSTELEFFSEYGDANRFKIQEVVGKGSYGVVCSAVDTLTNEKVAIKKIRDIFEHISDAARILREIKLLRLLRHPDIVEIKHIILPSSRRDFKDIFVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKMEFEFERRKVTKEDIRELIFREILEYHPQLLKDYLNGTERTNFLYPSAIDQFRKQFAHLEENEGKSGPDFPLERKHASLPRSTVHTNTITPKETSDAVSSKDRYAPAGSYIQHCKYLERHSTNLARISQAPQRIVATQAKPGRIVGPVVPYERGGVVKDAYDPRIFIRSAVPSNAVHPTYYYRQPCGQNQETATTTGAEQDNNKQASQCGITAKLAEDTAAKGVVSNPFFMTRAGVPKVGHNDRTPDSKLLQVNAQYGVATTHKKVGAVEYELTRMH | 645 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 379128 | 383318 | + | evm.model.ptg000013l.55 | HCH7g0055 | 547340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0055 | 645 | ProSiteProfiles | Protein kinase domain profile. | 60 | 351 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0055 | 645 | FunFam | Mitogen-activated protein kinase | 146 | 374 | - | - | |
HCH7g0055 | 645 | ProSitePatterns | MAP kinase signature. | 95 | 198 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0055 | 645 | MobiDBLite | consensus disorder prediction | 430 | 448 | - | - | |
HCH7g0055 | 645 | SMART | serkin_6 | 60 | 351 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0055 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 397 | - | - | |
HCH7g0055 | 645 | CDD | STKc_TDY_MAPK | 59 | 396 | - | - | |
HCH7g0055 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 146 | 374 | - | - | |
HCH7g0055 | 645 | MobiDBLite | consensus disorder prediction | 430 | 470 | - | - | |
HCH7g0055 | 645 | ProSitePatterns | Protein kinases ATP-binding region signature. | 66 | 90 | IPR017441 | GO:0005524(InterPro) | |
HCH7g0055 | 645 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 58 | 392 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
HCH7g0055 | 645 | FunFam | Mitogen-activated protein kinase | 50 | 153 | - | - | |
HCH7g0055 | 645 | MobiDBLite | consensus disorder prediction | 449 | 463 | - | - | |
HCH7g0055 | 645 | Pfam | Protein kinase domain | 61 | 351 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0055 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 355 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH6g0615 | HCH-Chr6:36974428 | HCH7g0055 | HCH-Chr7:379128 | 8.30E-218 | dispersed | |
HCH6g1629 | HCH-Chr6:49363903 | HCH7g0055 | HCH-Chr7:379128 | 5.30E-206 | dispersed | |
HCH7g0055 | HCH-Chr7:379128 | HCH8g1125 | HCH-Chr8:46964354 | 2.70E-198 | dispersed | |
HCH11g0743 | HCH-Chr11:36188735 | HCH7g0055 | HCH-Chr7:379128 | 1.30E-187 | wgd | |
HCH2g0905 | HCH-Chr2:52532151 | HCH7g0055 | HCH-Chr7:379128 | 2.10E-253 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81614 | PF00069 | Pkinase | 3.00E-65 | CL0016 | HCH | PK |
Pathway information
