Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0060 ATGTCTCAAGAACTTGGCTGTTTTCTATGTTCTTTGTTCTTGGTTTTAGCTGCAATAACATCATTGCCTGTTCTTCTTTTCTTAAAAACAAAGAGAAGCAATAACAAAAGCAAAAAACTACCACCAGGGCAAATGGGTCTTCCTTGGATTGGTGAAACAATGGATTTCTACAGAGCTCAACAAAACAACAGATTGTTTGAGGAGTTTGTTCAAACAAGAGTGGCTAAATATGGTAAAATCTTCAAAACAAGCTTAATGGGGTCTCCAACGGTGGTTGTAAATGGAGCTGAAGCCAATAGATTCTTCTTGTCCAATGAGTTTAAGATGGTGGTAAGCTCATGGCCATCAGCATCAGTCCAGCTGATGGGAAAAGATTCCATCATGCAGAAGCAAGGCGAGAGACACCGATGCTTGCGAGGGCTTATCAGCTCGCGCCTCGGCGGTTTCAGTCTCGAGACTATGATGCCTAAACTCTGCAGGACAGTTCAGTCGCATCTCGACAGCAGATGGCACGGCTGTGACCAAATCGGTCTGTACCATTCGACGAAAGTCTTGACATTTACAATAGTGTTCGAGTGTTTGTTGGGAATTCGAGTGGAGCAAGATGTGTTAACGACATTTGAGAGAGTTCTTGAAGGAGTTTTCGCACCGCCGTTCAAGCTTCCTGGGACGAGGTTTTCGAGAGCCATGAAGGCGAGATTAGAGATAAAGGAAATGTTGACCCGAGAGGTGAGAGAGAAGAGGGAGAGAATCGAAGGAAAGATGGAAGAAGAAGAAGGTGGTTTATTGCTTTCAAAGATGGTGGCAGCGATGATGAGAGGGGAAATAAGTGAAGAGGAAGTTATAGATAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACCTCTTTTGCCATTGCCATGGTTTTCAAAATGTTGGCTCAGCATACAAACTGCTATAGACTTCTACTCCAAGAACAGACTGACATATTGAGAAGCAAAAGACAAGGCCAGAATTTGACAATGGAAGATGTAAAGAAGATGAAGTATACTTGGCAGGTAGCTCGTGAAAGCATGAGACTGTTTCCCCCTATATTTGGTTCTTTCAGGAAAGCAATTTCTGACATTGAATACAATGGATTCTTCATTCCGAAAGGATGGAAGGTGTTGTGGACAACATATGGAACACATTATGAGGAAGAGTATTTTGAAGATCCATTAAGTTTCAAGCCAAGCAGATTTGAGGAACCGGTTTCTCAGTATGTTTACGTCCCATTTGGAGGAGGGCCAAGAGTTTGTGCTGGGTATCAGCTGGCCAAATTGAATATCCTCATCTTTATACACTTTGTTGTAACTCGATATGATTGGTCATTAATCCATCCGGACGAGCCAATCACAATGGATCCTCTCCCATTCCCTTCTCATGGAATGCCAATTAAGATTTCTCCAAAACCAGAAGTTTGTCACAATATACAGCAAATGTAA 1467 42.19 MSQELGCFLCSLFLVLAAITSLPVLLFLKTKRSNNKSKKLPPGQMGLPWIGETMDFYRAQQNNRLFEEFVQTRVAKYGKIFKTSLMGSPTVVVNGAEANRFFLSNEFKMVVSSWPSASVQLMGKDSIMQKQGERHRCLRGLISSRLGGFSLETMMPKLCRTVQSHLDSRWHGCDQIGLYHSTKVLTFTIVFECLLGIRVEQDVLTTFERVLEGVFAPPFKLPGTRFSRAMKARLEIKEMLTREVREKRERIEGKMEEEEGGLLLSKMVAAMMRGEISEEEVIDNVVLLVFAAHDTTSFAIAMVFKMLAQHTNCYRLLLQEQTDILRSKRQGQNLTMEDVKKMKYTWQVARESMRLFPPIFGSFRKAISDIEYNGFFIPKGWKVLWTTYGTHYEEEYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRVCAGYQLAKLNILIFIHFVVTRYDWSLIHPDEPITMDPLPFPSHGMPIKISPKPEVCHNIQQM 488
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 395472 397449 - evm.model.ptg000013l.60 HCH7g0060 547345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0060 488 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 SUPERFAMILY Cytochrome P450 36 477 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 Gene3D Cytochrome P450 29 477 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 Coils Coil 237 257 - -
HCH7g0060 488 CDD CYP90-like 73 477 - -
HCH7g0060 488 PANTHER CYTOCHROME P450 26 39 458 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
HCH7g0060 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH7g0060 488 Pfam Cytochrome P450 41 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0060 488 FunFam Taxadiene 5-alpha hydroxylase 31 478 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0060 HCH-Chr7:395472 HCH8g1097 HCH-Chr8:46768633 6.00E-73 dispersed
HCH7g0060 HCH-Chr7:395472 HCH2g0246 HCH-Chr2:37816321 2.90E-75 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0060 - - - 0.0