Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g0060 | ATGTCTCAAGAACTTGGCTGTTTTCTATGTTCTTTGTTCTTGGTTTTAGCTGCAATAACATCATTGCCTGTTCTTCTTTTCTTAAAAACAAAGAGAAGCAATAACAAAAGCAAAAAACTACCACCAGGGCAAATGGGTCTTCCTTGGATTGGTGAAACAATGGATTTCTACAGAGCTCAACAAAACAACAGATTGTTTGAGGAGTTTGTTCAAACAAGAGTGGCTAAATATGGTAAAATCTTCAAAACAAGCTTAATGGGGTCTCCAACGGTGGTTGTAAATGGAGCTGAAGCCAATAGATTCTTCTTGTCCAATGAGTTTAAGATGGTGGTAAGCTCATGGCCATCAGCATCAGTCCAGCTGATGGGAAAAGATTCCATCATGCAGAAGCAAGGCGAGAGACACCGATGCTTGCGAGGGCTTATCAGCTCGCGCCTCGGCGGTTTCAGTCTCGAGACTATGATGCCTAAACTCTGCAGGACAGTTCAGTCGCATCTCGACAGCAGATGGCACGGCTGTGACCAAATCGGTCTGTACCATTCGACGAAAGTCTTGACATTTACAATAGTGTTCGAGTGTTTGTTGGGAATTCGAGTGGAGCAAGATGTGTTAACGACATTTGAGAGAGTTCTTGAAGGAGTTTTCGCACCGCCGTTCAAGCTTCCTGGGACGAGGTTTTCGAGAGCCATGAAGGCGAGATTAGAGATAAAGGAAATGTTGACCCGAGAGGTGAGAGAGAAGAGGGAGAGAATCGAAGGAAAGATGGAAGAAGAAGAAGGTGGTTTATTGCTTTCAAAGATGGTGGCAGCGATGATGAGAGGGGAAATAAGTGAAGAGGAAGTTATAGATAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACCTCTTTTGCCATTGCCATGGTTTTCAAAATGTTGGCTCAGCATACAAACTGCTATAGACTTCTACTCCAAGAACAGACTGACATATTGAGAAGCAAAAGACAAGGCCAGAATTTGACAATGGAAGATGTAAAGAAGATGAAGTATACTTGGCAGGTAGCTCGTGAAAGCATGAGACTGTTTCCCCCTATATTTGGTTCTTTCAGGAAAGCAATTTCTGACATTGAATACAATGGATTCTTCATTCCGAAAGGATGGAAGGTGTTGTGGACAACATATGGAACACATTATGAGGAAGAGTATTTTGAAGATCCATTAAGTTTCAAGCCAAGCAGATTTGAGGAACCGGTTTCTCAGTATGTTTACGTCCCATTTGGAGGAGGGCCAAGAGTTTGTGCTGGGTATCAGCTGGCCAAATTGAATATCCTCATCTTTATACACTTTGTTGTAACTCGATATGATTGGTCATTAATCCATCCGGACGAGCCAATCACAATGGATCCTCTCCCATTCCCTTCTCATGGAATGCCAATTAAGATTTCTCCAAAACCAGAAGTTTGTCACAATATACAGCAAATGTAA | 1467 | 42.19 | MSQELGCFLCSLFLVLAAITSLPVLLFLKTKRSNNKSKKLPPGQMGLPWIGETMDFYRAQQNNRLFEEFVQTRVAKYGKIFKTSLMGSPTVVVNGAEANRFFLSNEFKMVVSSWPSASVQLMGKDSIMQKQGERHRCLRGLISSRLGGFSLETMMPKLCRTVQSHLDSRWHGCDQIGLYHSTKVLTFTIVFECLLGIRVEQDVLTTFERVLEGVFAPPFKLPGTRFSRAMKARLEIKEMLTREVREKRERIEGKMEEEEGGLLLSKMVAAMMRGEISEEEVIDNVVLLVFAAHDTTSFAIAMVFKMLAQHTNCYRLLLQEQTDILRSKRQGQNLTMEDVKKMKYTWQVARESMRLFPPIFGSFRKAISDIEYNGFFIPKGWKVLWTTYGTHYEEEYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRVCAGYQLAKLNILIFIHFVVTRYDWSLIHPDEPITMDPLPFPSHGMPIKISPKPEVCHNIQQM | 488 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 395472 | 397449 | - | evm.model.ptg000013l.60 | HCH7g0060 | 547345 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g0060 | 488 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | E-class P450 group I signature | 386 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | E-class P450 group I signature | 280 | 297 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | SUPERFAMILY | Cytochrome P450 | 36 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | Gene3D | Cytochrome P450 | 29 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | P450 superfamily signature | 347 | 358 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | P450 superfamily signature | 291 | 308 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | Coils | Coil | 237 | 257 | - | - | |
| HCH7g0060 | 488 | CDD | CYP90-like | 73 | 477 | - | - | |
| HCH7g0060 | 488 | PANTHER | CYTOCHROME P450 26 | 39 | 458 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| HCH7g0060 | 488 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH7g0060 | 488 | Pfam | Cytochrome P450 | 41 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0060 | 488 | FunFam | Taxadiene 5-alpha hydroxylase | 31 | 478 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH7g0060 | HCH-Chr7:395472 | HCH8g1097 | HCH-Chr8:46768633 | 6.00E-73 | dispersed | |
| HCH7g0060 | HCH-Chr7:395472 | HCH2g0246 | HCH-Chr2:37816321 | 2.90E-75 | transposed |
Pathway information