Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0076 ATGAGGAAGAGGGAAAGAGAAAACCCTTGTGGGGTTTGTGGTCATTATCATAAATATGAAGAAGGAGAAGTTTGTGGGATTTGTGGGCATAGAGTTCCTGCAAATTCTGAAAAAACTTCTTTGCAAATTAGTGCTTTTCCTTCAGAGATCCTTCCTGAATTTCTCTATTTGGGAAGCTATGATAATGCTTCACGGTCTGAGCTTTTGAAGACTCAAGGAATTTCTCGTGTTCTTAATAGTGTGCCTGCTTGTCAAAACCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATCAGACTTTACCTTTTGATGACGCGATTGAATTTTTAGAACTATGTGAAAGGGACAAGGCTCGTGTTCTAGTGCACTGCATGTCAGGGAAAAATAGGTCCCCGGCTATCGTGATAGCATTCTTGATGAAAAGTAAAGGTTGGAGACTTGCACAAAGTTACCAGTGGGTAAAAGAACGGAGGCCACCTGTCGACTTAACTGAAGCTGTCTATCAGCAACTGCAGGAGTATGAACAGAAGATTTTTGGATCAGCAGAAAATTGCTTCCTAGCCTCGCCAATCTTCCCGCCTGCTGGCCTGGCTTCTTTTAACTTTGGCTTCCCAAAGACTGGTGATCCAGTTCCTGTAACTCCTTTCAACAATATTGGCGCTACCTCGATATTTTCCCGTCCTACCGTAGATGTACCTTCTCACGAGTTCACGTTCGGAGCTGGGCAGGGTCAAAACAGTTTCTCCGGAAGCCCTTTTGGTACCAATCCACGAAACCCCGCAAGCAGCAACATCCAAATGGACAGTGCATAA 819 44.08 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPANSEKTSLQISAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNSVPACQNLYKNSFTYHCLQYDQTLPFDDAIEFLELCERDKARVLVHCMSGKNRSPAIVIAFLMKSKGWRLAQSYQWVKERRPPVDLTEAVYQQLQEYEQKIFGSAENCFLASPIFPPAGLASFNFGFPKTGDPVPVTPFNNIGATSIFSRPTVDVPSHEFTFGAGQGQNSFSGSPFGTNPRNPASSNIQMDSA 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 511846 514116 + evm.model.ptg000013l.76 HCH7g0076 547361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0076 272 FunFam Protein-tyrosine-phosphatase IBR5 36 186 - -
HCH7g0076 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 271 IPR044212 GO:0005634(PANTHER)|GO:0009734(InterPro)|GO:0009738(InterPro)|GO:0033549(PANTHER)|GO:0033549(InterPro)|GO:0043407(InterPro)
HCH7g0076 272 SMART dsp_5 46 179 IPR020422 GO:0006470(InterPro)
HCH7g0076 272 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 182 IPR029021 -
HCH7g0076 272 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470(InterPro)
HCH7g0076 272 MobiDBLite consensus disorder prediction 243 272 - -
HCH7g0076 272 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 106 171 IPR000387 GO:0016311(InterPro)
HCH7g0076 272 Pfam Dual specificity phosphatase, catalytic domain 55 179 IPR000340 GO:0016311(InterPro)
HCH7g0076 272 CDD DSP_plant_IBR5-like 47 176 - -
HCH7g0076 272 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311(InterPro)
HCH7g0076 272 Gene3D Protein tyrosine phosphatase superfamily 30 183 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0076 K04459 - csv:101211000 502.671