Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0082 | ATGTCTACCGCCGTCGAAGTCGACGCCGGTGATGGCCACCTTCATAGCATTCATTCCGCCGTTCTAAGTAACCTTTCCAATGGAGATAACTGTGAGAATGATAATATCGCTGGAGAAGACGTCTTCGTTCCTCCGCTAAACTTCGCCGTCGTCGACAATGGCATTTTCCGATCAGGCTTCCCGGACCCTTCTAACTTCTCATTTCTTCAGACTTTAGGCCTTCGTTCCATTATATGCCTCTGTCCGGAGCCATATCCTGAGGCAAGTATGGATTTTCTCAAGTCCAATGGGATCAGATTGTTCCAATTCGGAATTGAAGGTTCTAAGGCTTGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGACTGTATGAGGAATTTGGATATGGGCAATGACCATATTTACTATATGGAGCCTTTTGTGAACATTCCAGACAATACAATTCGTGAGGCACTTAAAATTATCCTTGATGTGAGAAATCGTCCCGTTTTGATTCATTGTAAACGAGGAAAGCATCGAACTGGTTGTGTTGTTGGATGCTTCAGAAAGTTACAAAAATGGTGTTTATCATCAGTTTTTGATGAGTACCAGCGGTTCGCCGCCGCAAAGGCGAGAGTTTCAGATCAGAGGTTCATAGAGTTATTTGATGTTTCTGGCTTGAAGCATCTGCCATCATAA | 684 | 43.42 | MSTAVEVDAGDGHLHSIHSAVLSNLSNGDNCENDNIAGEDVFVPPLNFAVVDNGIFRSGFPDPSNFSFLQTLGLRSIICLCPEPYPEASMDFLKSNGIRLFQFGIEGSKACSDKVDAYVNLILDCMRNLDMGNDHIYYMEPFVNIPDNTIREALKIILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDVSGLKHLPS | 227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 549090 | 551349 | + | evm.model.ptg000013l.82 | HCH7g0082 | 547367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0082 | 227 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 35 | 226 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
HCH7g0082 | 227 | Gene3D | Protein tyrosine phosphatase superfamily | 41 | 221 | IPR029021 | - | |
HCH7g0082 | 227 | Pfam | Tyrosine phosphatase family | 43 | 221 | IPR004861 | - | |
HCH7g0082 | 227 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 42 | 218 | IPR029021 | - | |
HCH7g0082 | 227 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 167 | 177 | IPR016130 | GO:0016311(InterPro) | |
HCH7g0082 | 227 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 47 | 227 | IPR020422 | GO:0006470(InterPro) | |
HCH7g0082 | 227 | PRINTS | Plant and fungal dual specificity phosphatase signature | 79 | 92 | IPR020428 | GO:0016791(InterPro) | |
HCH7g0082 | 227 | PRINTS | Plant and fungal dual specificity phosphatase signature | 98 | 112 | IPR020428 | GO:0016791(InterPro) | |
HCH7g0082 | 227 | PRINTS | Plant and fungal dual specificity phosphatase signature | 145 | 159 | IPR020428 | GO:0016791(InterPro) | |
HCH7g0082 | 227 | PRINTS | Plant and fungal dual specificity phosphatase signature | 42 | 59 | IPR020428 | GO:0016791(InterPro) | |
HCH7g0082 | 227 | CDD | PFA-DSP_Siw14 | 42 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH7g0082 | HCH-Chr7:549090 | HCH8g0272 | HCH-Chr8:14877322 | 3.80E-54 | dispersed | |
HCH2g0875 | HCH-Chr2:52313633 | HCH7g0082 | HCH-Chr7:549090 | 2.10E-73 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0082 | K18045 | - | csv:101209768 | 300.441 |