Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0126 ATGATTTCGAGATCGTATACCAATCTTCTAGATCTGGCTTCTGGGAATTTTCCGGCGATGGAGGTGAAAAGGAAACGGTTTCCAAGGGTCATGACTGTTCCGGGTAATGTAGCGGAGCTGGATGATGATCAAGACTATAGTGTGACGTCTGAGAACCCGTCGTCGATTTCTTCGGATCGGATGATAATTGTAGCAAATCAGCTTCCGCTAAGAGCAAAGCGAAGGGAGGATGATAATTCATGGAGTTTCAGTTGGAATGAGGATTCATTACTCTTACAGCTCAAGGATGGCTTGCCAGAAGATATGGAGATTCTTTATGTTGGTTCGCTGAAAGTTGATATCCAGCCGGATGAGCAAGATGAGGTTTCTCAGATATTGTTAGAGAAATTTAGGTGTATTCCTACATTTCTGCCTCCTCATATTCTGGAAAAGTTTTATGATGGTTTCTGCAAGAGGCATTTGTGGCCACTTTTTCATTATATGCTGCCGTATGCTTCTGACCAAAGAGGCCGATTTGATCGCTCTATGTGGGAAGCCTATGTATCAGCAAATAAACTATTTTTTCAAAAAGTAGTTGAGGTCATCAACCCTGATGATGACTATATCTGGATTCATGATTACCATTTGATGGTACTTCCGACCTTCTTAAGGAGGCGCTTCAATAGAGTGAAAATGGGATTTTTCCTTCACAGTCCATTTCCCTCATCTGAAATCTACCGTACGCTTCCTGTCAGGGAAGAGATTCTCAAGGCTTTACTTAACTCTGATATTATTGGATTCCACACCTTTGATTATGCTCGTCATTTCCTTTCTTGTTGCAGTCGAATGTTGGGTTTAGAATACCAGTCTAAGAGGGGCTATCTTGGATTGGAATACTATGGAAGGACTATTGGGATAAAGATAATGCCAGTTGGTATTCATATGAGTCGGATTGAATCAGTAATGAAACTGGCAGATGAGGACCCTAGGACTAGGGAGCTCAGAGAGCAATTTGAAGGGAAAACGGTGCTGCTTGGTGTTGATGATATGGACATTTTCAAAGGTATCAATCTGAAACTGTTAACTATGGAACAGTTACTTAAGCAACACCCGAAGTGGCAGGGGAAGGCTGTATTGATCCAGATTGTCAACCCTACTAGAGGCAGAGGAAGAGATTTGCAAGAAATAGAGGATGAGATAAAAGAAAGCTGCAGAAGGATAAACAAGGAATATGGACGTTCTGGCTATGAGCCGATAGTACTTGTTAACAGGCAAGTCTCAATTACTGAGAGGGTTGCTTATTACAGCATTGCTGAGTGCGTAGTTGTCACTGCTGTTAGAGATGGGATGAACCTTATTCCTTATGAGTACATTATCTGTAGACAAGGAATATCTACTACCGAAAAATGTTTAAACTTCAGTGGGCCAAAAAAGAGCATGTTAGTGATATCTGAATTTATAGGGTGTTCTCCATCATTAAGTGGGGCATTTCGTATCAATCCTTGGAATGTTGAGAGTACTGCAGAGGCTTTGAATGAAGCCATGTCCATGGCTGATTCTGAGAAGCAGTTACGACATGAGAAGCATTATCGTTATGTTACTACCCATGACGTGGCTTATTGGTCTCGTAGCTTCTTGCAAGATATGGAGAGAACTTGCTGTGATCATTTTAGAAGACGATGTTGGGGAATTGGTTTTAGCTTTGGATTCCGGGTTGTAGCTCTTGATCCTAATTTCAGAAAACTTTCAGTCGATGCTATTGTATCGGCTTACAGCAGAGCTGAAAGTAGAGCTATTCTTTTGGATTATGACGGCACAGTGATGCCCCAAAACTCAATCAACAAGTCACCAAGTCAGCAGGTTATCTCTATCCTTAATACACTTTGTGCAGATCCAAAAAATGTAGTCTTCATAGTAAGTGGACGAGGGAGGGACAGCTTAAGCAAGTGGTTTTGCTCCTGCAAGAAGCTTGGAATTGCAGCAGAACATGGATACTTTTTGAGGCAATCACAGAAAGAAGAGTGGAAAATTTGTGGCCAAAGTTCTGATTTTGGATGGATGCAGATGGCCGAACCTGTTATGAAATTATATACCGAGGCTACTGATGGTTCCTCCATTGAACGAAAGGAAAGTGCTTTAGTCTGGCAATACAGAGATGCAGATCCAGGCTTTGGATCTTCCCAGGCAAAGGAGATGTTGGATCATCTCGAGAGTGTTTTAGCAAATGAACCCGTTGCAGCAAAAAGTGGTCAATTCATAGTCGAAGTGAAACCGCAGGGGGTAACCAAAGGCCTAGTTGCTGAAAAGATCTTCGCATCAATGGCTGAGAATGGAAAACTTGCTGACTTTGTGTTGTGTATAGGCGATGACAGATCTGATGAGGATATGTTTGAAATAATTGGTAATGCATTGTCAAGTAATATTCTTTCTCCAACAACATCAGTTTTTGCATGCACTGTTGGACAAAAGCCAAGCAAAGCGAAATATTACTTAGACGACACAACTGAAGTGATAAGCATGCTCGAGTATCTGGCTGAGGCATCTAGTCCATTGCCGTCCTCCGAAGATGAAAGCGAGGAGCTTGAAGGAAGTGAGAATGCTTCTTGA 2586 41.92 MISRSYTNLLDLASGNFPAMEVKRKRFPRVMTVPGNVAELDDDQDYSVTSENPSSISSDRMIIVANQLPLRAKRREDDNSWSFSWNEDSLLLQLKDGLPEDMEILYVGSLKVDIQPDEQDEVSQILLEKFRCIPTFLPPHILEKFYDGFCKRHLWPLFHYMLPYASDQRGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMSRIESVMKLADEDPRTRELREQFEGKTVLLGVDDMDIFKGINLKLLTMEQLLKQHPKWQGKAVLIQIVNPTRGRGRDLQEIEDEIKESCRRINKEYGRSGYEPIVLVNRQVSITERVAYYSIAECVVVTAVRDGMNLIPYEYIICRQGISTTEKCLNFSGPKKSMLVISEFIGCSPSLSGAFRINPWNVESTAEALNEAMSMADSEKQLRHEKHYRYVTTHDVAYWSRSFLQDMERTCCDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDAIVSAYSRAESRAILLDYDGTVMPQNSINKSPSQQVISILNTLCADPKNVVFIVSGRGRDSLSKWFCSCKKLGIAAEHGYFLRQSQKEEWKICGQSSDFGWMQMAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQGVTKGLVAEKIFASMAENGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPTTSVFACTVGQKPSKAKYYLDDTTEVISMLEYLAEASSPLPSSEDESEELEGSENAS 861
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 833987 837084 + evm.model.ptg000013l.126 HCH7g0126 547411
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0126 861 Gene3D Glycogen Phosphorylase B; 314 527 - -
HCH7g0126 861 CDD HAD_TPP 591 830 - -
HCH7g0126 861 FunFam Alpha,alpha-trehalose-phosphate synthase 314 527 - -
HCH7g0126 861 CDD GT20_TPS 60 543 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
HCH7g0126 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
HCH7g0126 861 MobiDBLite consensus disorder prediction 840 861 - -
HCH7g0126 861 Gene3D - 589 689 IPR023214 -
HCH7g0126 861 Gene3D - 718 850 IPR023214 -
HCH7g0126 861 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
HCH7g0126 861 MobiDBLite consensus disorder prediction 846 861 - -
HCH7g0126 861 SUPERFAMILY HAD-like 590 838 IPR036412 -
HCH7g0126 861 Gene3D Glycogen Phosphorylase B; 53 313 - -
HCH7g0126 861 NCBIfam HAD-IIB family hydrolase 592 796 IPR006379 -
HCH7g0126 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 850 - -
HCH7g0126 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
HCH7g0126 861 NCBIfam trehalose-phosphatase 588 838 IPR003337 GO:0005992(InterPro)
HCH7g0126 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 546 - -
HCH7g0126 861 Pfam Trehalose-phosphatase 593 827 IPR003337 GO:0005992(InterPro)
HCH7g0126 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 840 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0126 HCH-Chr7:833987 HCH8g1373 HCH-Chr8:48475020 0.00E+00 dispersed
HCH6g1128 HCH-Chr6:45863708 HCH7g0126 HCH-Chr7:833987 0.00E+00 transposed
HCH14g1006 HCH-Chr14:37347846 HCH7g0126 HCH-Chr7:833987 0.00E+00 wgd
HCH3g0746 HCH-Chr3:5405414 HCH7g0126 HCH-Chr7:833987 1.20E-122 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0126 K16055 - csv:101209914 1609.73