Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0126 | ATGATTTCGAGATCGTATACCAATCTTCTAGATCTGGCTTCTGGGAATTTTCCGGCGATGGAGGTGAAAAGGAAACGGTTTCCAAGGGTCATGACTGTTCCGGGTAATGTAGCGGAGCTGGATGATGATCAAGACTATAGTGTGACGTCTGAGAACCCGTCGTCGATTTCTTCGGATCGGATGATAATTGTAGCAAATCAGCTTCCGCTAAGAGCAAAGCGAAGGGAGGATGATAATTCATGGAGTTTCAGTTGGAATGAGGATTCATTACTCTTACAGCTCAAGGATGGCTTGCCAGAAGATATGGAGATTCTTTATGTTGGTTCGCTGAAAGTTGATATCCAGCCGGATGAGCAAGATGAGGTTTCTCAGATATTGTTAGAGAAATTTAGGTGTATTCCTACATTTCTGCCTCCTCATATTCTGGAAAAGTTTTATGATGGTTTCTGCAAGAGGCATTTGTGGCCACTTTTTCATTATATGCTGCCGTATGCTTCTGACCAAAGAGGCCGATTTGATCGCTCTATGTGGGAAGCCTATGTATCAGCAAATAAACTATTTTTTCAAAAAGTAGTTGAGGTCATCAACCCTGATGATGACTATATCTGGATTCATGATTACCATTTGATGGTACTTCCGACCTTCTTAAGGAGGCGCTTCAATAGAGTGAAAATGGGATTTTTCCTTCACAGTCCATTTCCCTCATCTGAAATCTACCGTACGCTTCCTGTCAGGGAAGAGATTCTCAAGGCTTTACTTAACTCTGATATTATTGGATTCCACACCTTTGATTATGCTCGTCATTTCCTTTCTTGTTGCAGTCGAATGTTGGGTTTAGAATACCAGTCTAAGAGGGGCTATCTTGGATTGGAATACTATGGAAGGACTATTGGGATAAAGATAATGCCAGTTGGTATTCATATGAGTCGGATTGAATCAGTAATGAAACTGGCAGATGAGGACCCTAGGACTAGGGAGCTCAGAGAGCAATTTGAAGGGAAAACGGTGCTGCTTGGTGTTGATGATATGGACATTTTCAAAGGTATCAATCTGAAACTGTTAACTATGGAACAGTTACTTAAGCAACACCCGAAGTGGCAGGGGAAGGCTGTATTGATCCAGATTGTCAACCCTACTAGAGGCAGAGGAAGAGATTTGCAAGAAATAGAGGATGAGATAAAAGAAAGCTGCAGAAGGATAAACAAGGAATATGGACGTTCTGGCTATGAGCCGATAGTACTTGTTAACAGGCAAGTCTCAATTACTGAGAGGGTTGCTTATTACAGCATTGCTGAGTGCGTAGTTGTCACTGCTGTTAGAGATGGGATGAACCTTATTCCTTATGAGTACATTATCTGTAGACAAGGAATATCTACTACCGAAAAATGTTTAAACTTCAGTGGGCCAAAAAAGAGCATGTTAGTGATATCTGAATTTATAGGGTGTTCTCCATCATTAAGTGGGGCATTTCGTATCAATCCTTGGAATGTTGAGAGTACTGCAGAGGCTTTGAATGAAGCCATGTCCATGGCTGATTCTGAGAAGCAGTTACGACATGAGAAGCATTATCGTTATGTTACTACCCATGACGTGGCTTATTGGTCTCGTAGCTTCTTGCAAGATATGGAGAGAACTTGCTGTGATCATTTTAGAAGACGATGTTGGGGAATTGGTTTTAGCTTTGGATTCCGGGTTGTAGCTCTTGATCCTAATTTCAGAAAACTTTCAGTCGATGCTATTGTATCGGCTTACAGCAGAGCTGAAAGTAGAGCTATTCTTTTGGATTATGACGGCACAGTGATGCCCCAAAACTCAATCAACAAGTCACCAAGTCAGCAGGTTATCTCTATCCTTAATACACTTTGTGCAGATCCAAAAAATGTAGTCTTCATAGTAAGTGGACGAGGGAGGGACAGCTTAAGCAAGTGGTTTTGCTCCTGCAAGAAGCTTGGAATTGCAGCAGAACATGGATACTTTTTGAGGCAATCACAGAAAGAAGAGTGGAAAATTTGTGGCCAAAGTTCTGATTTTGGATGGATGCAGATGGCCGAACCTGTTATGAAATTATATACCGAGGCTACTGATGGTTCCTCCATTGAACGAAAGGAAAGTGCTTTAGTCTGGCAATACAGAGATGCAGATCCAGGCTTTGGATCTTCCCAGGCAAAGGAGATGTTGGATCATCTCGAGAGTGTTTTAGCAAATGAACCCGTTGCAGCAAAAAGTGGTCAATTCATAGTCGAAGTGAAACCGCAGGGGGTAACCAAAGGCCTAGTTGCTGAAAAGATCTTCGCATCAATGGCTGAGAATGGAAAACTTGCTGACTTTGTGTTGTGTATAGGCGATGACAGATCTGATGAGGATATGTTTGAAATAATTGGTAATGCATTGTCAAGTAATATTCTTTCTCCAACAACATCAGTTTTTGCATGCACTGTTGGACAAAAGCCAAGCAAAGCGAAATATTACTTAGACGACACAACTGAAGTGATAAGCATGCTCGAGTATCTGGCTGAGGCATCTAGTCCATTGCCGTCCTCCGAAGATGAAAGCGAGGAGCTTGAAGGAAGTGAGAATGCTTCTTGA | 2586 | 41.92 | MISRSYTNLLDLASGNFPAMEVKRKRFPRVMTVPGNVAELDDDQDYSVTSENPSSISSDRMIIVANQLPLRAKRREDDNSWSFSWNEDSLLLQLKDGLPEDMEILYVGSLKVDIQPDEQDEVSQILLEKFRCIPTFLPPHILEKFYDGFCKRHLWPLFHYMLPYASDQRGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMSRIESVMKLADEDPRTRELREQFEGKTVLLGVDDMDIFKGINLKLLTMEQLLKQHPKWQGKAVLIQIVNPTRGRGRDLQEIEDEIKESCRRINKEYGRSGYEPIVLVNRQVSITERVAYYSIAECVVVTAVRDGMNLIPYEYIICRQGISTTEKCLNFSGPKKSMLVISEFIGCSPSLSGAFRINPWNVESTAEALNEAMSMADSEKQLRHEKHYRYVTTHDVAYWSRSFLQDMERTCCDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDAIVSAYSRAESRAILLDYDGTVMPQNSINKSPSQQVISILNTLCADPKNVVFIVSGRGRDSLSKWFCSCKKLGIAAEHGYFLRQSQKEEWKICGQSSDFGWMQMAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQGVTKGLVAEKIFASMAENGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPTTSVFACTVGQKPSKAKYYLDDTTEVISMLEYLAEASSPLPSSEDESEELEGSENAS | 861 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 833987 | 837084 | + | evm.model.ptg000013l.126 | HCH7g0126 | 547411 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0126 | 861 | Gene3D | Glycogen Phosphorylase B; | 314 | 527 | - | - | |
HCH7g0126 | 861 | CDD | HAD_TPP | 591 | 830 | - | - | |
HCH7g0126 | 861 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 314 | 527 | - | - | |
HCH7g0126 | 861 | CDD | GT20_TPS | 60 | 543 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
HCH7g0126 | 861 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 589 | 706 | - | - | |
HCH7g0126 | 861 | MobiDBLite | consensus disorder prediction | 840 | 861 | - | - | |
HCH7g0126 | 861 | Gene3D | - | 589 | 689 | IPR023214 | - | |
HCH7g0126 | 861 | Gene3D | - | 718 | 850 | IPR023214 | - | |
HCH7g0126 | 861 | Pfam | Glycosyltransferase family 20 | 60 | 543 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
HCH7g0126 | 861 | MobiDBLite | consensus disorder prediction | 846 | 861 | - | - | |
HCH7g0126 | 861 | SUPERFAMILY | HAD-like | 590 | 838 | IPR036412 | - | |
HCH7g0126 | 861 | Gene3D | Glycogen Phosphorylase B; | 53 | 313 | - | - | |
HCH7g0126 | 861 | NCBIfam | HAD-IIB family hydrolase | 592 | 796 | IPR006379 | - | |
HCH7g0126 | 861 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 719 | 850 | - | - | |
HCH7g0126 | 861 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 312 | - | - | |
HCH7g0126 | 861 | NCBIfam | trehalose-phosphatase | 588 | 838 | IPR003337 | GO:0005992(InterPro) | |
HCH7g0126 | 861 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 546 | - | - | |
HCH7g0126 | 861 | Pfam | Trehalose-phosphatase | 593 | 827 | IPR003337 | GO:0005992(InterPro) | |
HCH7g0126 | 861 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 24 | 840 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH7g0126 | HCH-Chr7:833987 | HCH8g1373 | HCH-Chr8:48475020 | 0.00E+00 | dispersed | |
HCH6g1128 | HCH-Chr6:45863708 | HCH7g0126 | HCH-Chr7:833987 | 0.00E+00 | transposed | |
HCH14g1006 | HCH-Chr14:37347846 | HCH7g0126 | HCH-Chr7:833987 | 0.00E+00 | wgd | |
HCH3g0746 | HCH-Chr3:5405414 | HCH7g0126 | HCH-Chr7:833987 | 1.20E-122 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0126 | K16055 | - | csv:101209914 | 1609.73 |