Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0133 | ATGACTACTGGAAGAGAAATCCTCCACAAAATGAAGGTGAAGGCAGGGTTTGGTTCATCAGCACAAGATACAGGGAAAGGTAAAAGCAAAGCATCAAAGAGTAGTATTACTCATGGAAGCCATTTGGTGAAGGGGAAATCCAATCATGCCATGGAAGATTACTTAGTTTCTGTTTTCAAGCAAGTGAAAGAACATGAATTAGGTTTGTTTGCAATTTTTGATGGCCATTTAGGCCATGATGTTGCGAATTATTTGCAAAACAACTTGTTTGATAATATTCTCAAAGAGCCTGATTTCTGGATGGAAACTGAGAAAGCAATAAAGAGAGCATACAAGAAAACAGATGATGAAATACTGGATAAAGTCTCACAACTGGGAAAAGGAGGATCGACCGCGGTGACTGCGATTCTTATCGACGGCGAGAAGCTTGTCGTTGGGAATGTCGGAGATTCTCGAGCTGTTTTATGTAAAAATGGCGTCGCCGAACAATTATCAGTGGATCATGAACCCAGCAAAGAAAAGAGGGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATCTTCCAGGAGACGTTCCACGTGTCGATGGACAATTGGCTGTAGCGAGAGCATTTGGAGATAGAAGTTTGAAAATTCACCTCAGCTCAGAACCTGATGTTGAAGTAAAAACAGTGGATGAGAATACAGAATTCATGATTTTGGCCAGTGATGGCATATGGAAGGTGATGAGTAACCAAGAAGCAGTAGATTGTATCAGACACATAAAAGATGCACAGTCAGCAGCGAAACAATTGATCGAGGAAGCAGTAACAAGGAGAAGTAAGGATGACATATCATGCATTGTGGTTAGGTTTCATTGA | 858 | 40.79 | MTTGREILHKMKVKAGFGSSAQDTGKGKSKASKSSITHGSHLVKGKSNHAMEDYLVSVFKQVKEHELGLFAIFDGHLGHDVANYLQNNLFDNILKEPDFWMETEKAIKRAYKKTDDEILDKVSQLGKGGSTAVTAILIDGEKLVVGNVGDSRAVLCKNGVAEQLSVDHEPSKEKREIESRGGFVSNLPGDVPRVDGQLAVARAFGDRSLKIHLSSEPDVEVKTVDENTEFMILASDGIWKVMSNQEAVDCIRHIKDAQSAAKQLIEEAVTRRSKDDISCIVVRFH | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 899353 | 901487 | - | evm.model.ptg000013l.133 | HCH7g0133 | 547418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0133 | 285 | Pfam | Protein phosphatase 2C | 48 | 277 | IPR001932 | - | |
HCH7g0133 | 285 | Gene3D | - | 15 | 285 | IPR036457 | - | |
HCH7g0133 | 285 | ProSiteProfiles | PPM-type phosphatase domain profile. | 37 | 284 | IPR001932 | - | |
HCH7g0133 | 285 | SUPERFAMILY | PP2C-like | 30 | 285 | IPR036457 | - | |
HCH7g0133 | 285 | MobiDBLite | consensus disorder prediction | 18 | 42 | - | - | |
HCH7g0133 | 285 | PANTHER | PROTEIN PHOSPHATASE | 34 | 282 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
HCH7g0133 | 285 | CDD | PP2Cc | 38 | 284 | IPR001932 | - | |
HCH7g0133 | 285 | SMART | PP2C_4 | 27 | 282 | IPR001932 | - | |
HCH7g0133 | 285 | MobiDBLite | consensus disorder prediction | 22 | 42 | - | - | |
HCH7g0133 | 285 | FunFam | Probable protein phosphatase 2C 39 | 27 | 285 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH13g0185 | HCH-Chr13:1245736 | HCH7g0133 | HCH-Chr7:899353 | 3.70E-48 | dispersed | |
HCH1g0356 | HCH-Chr1:50431583 | HCH7g0133 | HCH-Chr7:899353 | 3.00E-37 | dispersed | |
HCH7g0133 | HCH-Chr7:899353 | HCH8g0706 | HCH-Chr8:43775944 | 2.00E-28 | dispersed | |
HCH11g0986 | HCH-Chr11:41408307 | HCH7g0133 | HCH-Chr7:899353 | 6.00E-86 | transposed | |
HCH12g0261 | HCH-Chr12:1447153 | HCH7g0133 | HCH-Chr7:899353 | 2.30E-90 | transposed | |
HCH12g0442 | HCH-Chr12:2557650 | HCH7g0133 | HCH-Chr7:899353 | 1.00E-51 | transposed | |
HCH6g1489 | HCH-Chr6:48477764 | HCH7g0133 | HCH-Chr7:899353 | 2.80E-32 | transposed | |
HCH6g1774 | HCH-Chr6:50127475 | HCH7g0133 | HCH-Chr7:899353 | 1.40E-32 | transposed | |
HCH12g1058 | HCH-Chr12:7936003 | HCH7g0133 | HCH-Chr7:899353 | 7.40E-108 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0133 | K17506 | - | csv:101211399 | 458.759 |