Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0137 ATGGAAGATTCATCGCACCATCCTTCAGTGTTTCATAAGATATGTGGCCATTCTTACCTCACTTCTCGGCTCTCCCCTGGCTTCCACACCAAGAATTACAGTATGAAAGGTGTATATGTTAATGGAGGTTTAGAGAATTACTCGCAGACAACTTATCATGGGACTGGCTTGGCTGTTGTTTCGCCTACTTCACCCTTTTTTGTTGAAGCTCCTTCTGAAAAAGGTGCAGCTGGCTTTGCCGTGGATTTTCTGATGGGAGGAGTATCTGCTGCTGTATCCAAAACAGCTGCTGCTCCAATTGAGCGCGTCAAACTGCTGATACAAAATCAGGATGAGATGCTTAAGGTTGGTAGACTATCTGAGCCATACAAAGGAATTACGGATTGCTTTGCTCGAACAATGAAAGATGAAGGAGTTATTGCCCTATGGAGGGGGAACACTGCAAATGTTATCAGATACTTCCCCACACAGGCTTTGAATTTTGCCTTTAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAACTTGGCTTCTGGTGGTGCCGCTGGTGCTTCATCCCTTCTGTTTGTTTACTCCCTGGATTATGCTAGAACCCGTCTGGCTAATGATTCTAAGGCTGCTAAAAAGGGTGGTGAGAGGCAGTTTAATGGCCTCGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCCTGTGTTGGAATTATTGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCTCTAAAGCCCGTGGTTCTTGTTGGTGATCTGCAGGATAGTTTTCTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCTTCTTACCCGATCGACACTGTCCGGAGAAGAATGATGATGACCTCAGGAGAAGCAGTCAAGTACAATAGCTCCTTGGATGCATTTAAACAAATTGTTAAGAAAGAGGGTACTAAATCTCTCTTCAAAGGTGCTGGGGCAAACATTTTGCGTGCTGTTGCCGGTGCTGGTGTGCTTGCTGGTTACGATAAGCTTCAGCTAATTATGTTCGGCAAGAAATACGGTTCTGGTGGCGGCGGCTAA 1143 44.44 MEDSSHHPSVFHKICGHSYLTSRLSPGFHTKNYSMKGVYVNGGLENYSQTTYHGTGLAVVSPTSPFFVEAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKVGRLSEPYKGITDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGDLQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIMFGKKYGSGGGG 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 925822 927628 + evm.model.ptg000013l.137 HCH7g0137 547422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0137 380 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085(InterPro)
HCH7g0137 380 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085(InterPro)
HCH7g0137 380 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085(InterPro)
HCH7g0137 380 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085(InterPro)
HCH7g0137 380 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085(InterPro)
HCH7g0137 380 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085(InterPro)
HCH7g0137 380 FunFam ADP,ATP carrier protein, mitochondrial 80 375 - -
HCH7g0137 380 PRINTS Adenine nucleotide translocator signature 287 303 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
HCH7g0137 380 PRINTS Adenine nucleotide translocator signature 182 195 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
HCH7g0137 380 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
HCH7g0137 380 PRINTS Adenine nucleotide translocator signature 156 168 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
HCH7g0137 380 PRINTS Adenine nucleotide translocator signature 123 144 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
HCH7g0137 380 SUPERFAMILY Mitochondrial carrier 78 364 IPR023395 -
HCH7g0137 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 170 IPR018108 -
HCH7g0137 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 368 IPR018108 -
HCH7g0137 380 Gene3D Mitochondrial carrier domain 80 375 IPR023395 -
HCH7g0137 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 274 IPR018108 -
HCH7g0137 380 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 74 376 IPR002113 GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
HCH7g0137 380 Pfam Mitochondrial carrier protein 182 274 IPR018108 -
HCH7g0137 380 Pfam Mitochondrial carrier protein 78 174 IPR018108 -
HCH7g0137 380 Pfam Mitochondrial carrier protein 282 371 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH3g0135 HCH-Chr3:872388 HCH7g0137 HCH-Chr7:925822 3.70E-108 dispersed
HCH4g0532 HCH-Chr4:3464172 HCH7g0137 HCH-Chr7:925822 3.10E-57 dispersed
HCH4g1191 HCH-Chr4:7974266 HCH7g0137 HCH-Chr7:925822 2.10E-158 dispersed
HCH4g1192 HCH-Chr4:7977685 HCH7g0137 HCH-Chr7:925822 1.60E-166 dispersed
HCH7g0137 HCH-Chr7:925822 HCH7g1687 HCH-Chr7:48780773 3.70E-22 dispersed
HCH7g0137 HCH-Chr7:925822 HCH10g0148 HCH-Chr10:1224547 2.00E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0137 K05863 - csv:101212128 655.21