Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0145 ATGTTTCCTCCTTCCCCATCTCTTTTCTCTTCTATTATCTTCATTCTCATCTCCATTTCCATTCAAATCTCAGCCACAGAATTCATCTTCAATTCCAATTTTACTTCCACCAATACTTTACTCTTGGGCGACTCCAAAATCCAATCTTTAGGAATTCTCAGTCTCACAAATTCCACTTCTTTCTCCATTGGCCGTGCTTTATACCCTAAAAAAATTCCAATTTCATTCCCCTTTTCATTTGCCACTTCTTTCGTTTTCTCAGTTGCTCCCTTGAGAGATTTTCTCCCTGGCCATGGATTTGCTTTTCTTTTCACACCCTTTCCAGGAATTAATGGAACTAGCTCTGCTCAACATTTGGGGCTTTTTAATTTTAGTAATAATGCAAACCCTAATAACCATGTTTTTGCTGTTGAATTTGATTCTTTTAGAAATGAAGAATTTAATGATGTCAATGATAATCATGTTGGTTTGGATGTGAATTCTCTTGAGTCTATTGCTTCCTCTGTAGCAGGGATTTGGGGTGGAGAAGATAAAGGAGAAATCGAAAATTTCGAAGAATTGAAGCTGAATAATGGAGAAAATTATCAGGTTTGGATTGAATGTGTGAATTCTTTGGTTAATGTCACAATGGCTCCAGCAGGATCGGTAAGGCCTCAGAAGCCATTGATAAGTGAATTTGTTAATTTTTCTGAAGTTCTTTTGGATGAAATGTATGTGGGGTTTACTGCAGCCACAGGGCAGTTAGTTCAAAATCATAGGATATTGTGTTGGAGCTTTAGTACTACTAACTTTTCAATTGGTGATGCTTTGGTGACCGCGAATTTGCCTTCTTTTGTTCTTCCTCCGAAGGAGTCTGTATTTGAATCGAAAGCCTTTATTGTATCGGTATCTGTGGGGGGTGGATTCATTATTATCTGCGGCATTGTAGTTTGTGTAGTTCTAATGAAATGGAGGAGGAAAAGGAGACAAAAGAAGGAGGATGTTGAAGACTGGGAGGTGGAGTATTGGCCGCATCGATTTGCTTACGAAGATGTTTACGAAGCAACTAATGGATTCTCAGATGGCAATGTGATTGGTGTGGGGGGTAATGGGAAGGTCTATAAAGGGGTATTAGGAGGAGTAGAGGTTGCTGTGAAGAGAATCTCTCTTGAAGTTGAGAGTGGAAATGGAATGAGGGAGTTTTTGGCTGAGGTTTCAAGCTTAGGGAGATTGAAGCATAGAAATCTTGTGAGGCTTGTAGGATGGTGTAAAAACGAGAAGAAAAGCTTAATCTTGATGTATGATTATATGGAAAATGGAAGTTTGGATAAGAAGTTGTTTGGTTGTGATGATAATGTAATGCTTAGTTGGGAGGAAAGAATGAAGGCTTTAAAAGATGTGGCCAATGGGTTGTTGTATTTGCATCAAGGTTGGGATTGTAAGGTCTTGCACCGAGACATCAAGGCGAACAATGTATTACTTGACAACGATATGAATGCTCGTTTAGGTGACTTCGGGTTGGCTCGAATTCACCGCCCTGAGCAATTGGCCGACACAACCCGAGTAGTTGGAACTGTTGGGTATATGGCACCAGAAGTCGTTCGATCAGGACGAGTATCTGCAGAGGCCGACGTTTTCGGGTTCGGGGTATTGGTTCTAGAGGTGGTGTGCGGGAGAAGATCGATTGAAGAAGGGAAGCCGTGGTTGATCGATTGCGTAAGAGGGTTAATCGAGAAGAATGAATTGGCATTTGCACTCGATGAGCGATTGAAAGCAAAGGGTGACAAATGTAGCTTTGATGAAGTGGAAAAGATGGTTTATTTGGGGTTATTGTGTGCACATCCTGACCCTGTTTCAAGGCCAACAATGCAACAAGTTTTGAAAATATTGGAGGAGACAAATGAAGGAGGAGCAAGACATGGATTATTATTAGAAAGACTCAAAACCTTAACAATATCACCTGAGCTTTTCCAAGACAACAATTTTCAACAACACCCAACATTGGAAGATGTCAAAATGTCTACTCCTTTGACATCATTAATAGAATCTGATATTATTAGAGATGGTCGCTAA 2052 40.16 MFPPSPSLFSSIIFILISISIQISATEFIFNSNFTSTNTLLLGDSKIQSLGILSLTNSTSFSIGRALYPKKIPISFPFSFATSFVFSVAPLRDFLPGHGFAFLFTPFPGINGTSSAQHLGLFNFSNNANPNNHVFAVEFDSFRNEEFNDVNDNHVGLDVNSLESIASSVAGIWGGEDKGEIENFEELKLNNGENYQVWIECVNSLVNVTMAPAGSVRPQKPLISEFVNFSEVLLDEMYVGFTAATGQLVQNHRILCWSFSTTNFSIGDALVTANLPSFVLPPKESVFESKAFIVSVSVGGGFIIICGIVVCVVLMKWRRKRRQKKEDVEDWEVEYWPHRFAYEDVYEATNGFSDGNVIGVGGNGKVYKGVLGGVEVAVKRISLEVESGNGMREFLAEVSSLGRLKHRNLVRLVGWCKNEKKSLILMYDYMENGSLDKKLFGCDDNVMLSWEERMKALKDVANGLLYLHQGWDCKVLHRDIKANNVLLDNDMNARLGDFGLARIHRPEQLADTTRVVGTVGYMAPEVVRSGRVSAEADVFGFGVLVLEVVCGRRSIEEGKPWLIDCVRGLIEKNELAFALDERLKAKGDKCSFDEVEKMVYLGLLCAHPDPVSRPTMQQVLKILEETNEGGARHGLLLERLKTLTISPELFQDNNFQQHPTLEDVKMSTPLTSLIESDIIRDGR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 989427 991478 - evm.model.ptg000013l.145 HCH7g0145 547430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0145 683 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 314 429 - -
HCH7g0145 683 Gene3D Transferase(Phosphotransferase) domain 1 430 633 - -
HCH7g0145 683 Gene3D - 24 264 - -
HCH7g0145 683 ProSiteProfiles Protein kinase domain profile. 352 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0145 683 SMART serkin_6 352 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0145 683 FunFam L-type lectin-domain containing receptor kinase S.4 430 633 - -
HCH7g0145 683 FunFam L-type lectin-domain containing receptor kinase V.9 24 269 - -
HCH7g0145 683 Pfam Protein kinase domain 354 621 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0145 683 Pfam Legume lectin domain 26 263 IPR001220 GO:0030246(InterPro)
HCH7g0145 683 SUPERFAMILY Protein kinase-like (PK-like) 326 624 IPR011009 -
HCH7g0145 683 ProSitePatterns Protein kinases ATP-binding region signature. 358 379 IPR017441 GO:0005524(InterPro)
HCH7g0145 683 Gene3D Phosphorylase Kinase; domain 1 312 429 - -
HCH7g0145 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 262 IPR013320 -
HCH7g0145 683 PANTHER - 28 626 IPR050528 GO:0005886(PANTHER)
HCH7g0145 683 Coils Coil 314 334 - -
HCH7g0145 683 CDD lectin_legume_LecRK_Arcelin_ConA 26 262 IPR001220 GO:0030246(InterPro)
HCH7g0145 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0145 HCH-Chr7:989427 HCH9g0690 HCH-Chr9:4598386 8.00E-124 dispersed
HCH3g0652 HCH-Chr3:4550617 HCH7g0145 HCH-Chr7:989427 1.80E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81618 PF00069 Pkinase 9.60E-47 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0145 - - - 0.0