Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g0165 | ATGGGTGGTTGTGTCTCCACAAGTAGTCATAGTACATGTAGTAGCCAGAGCAATGGGGAGGCAGCTACTTCTTCAGCGTGCCTCGGAATTCGATGTCGAGGACGGAGGAGGACTAAACGAACATTCTCTGACCATGTTCATGCACTTCAGCATTTACCCTCTGCTCCCAACAGGATTTTCATGAATGGGAAAAGTCAATCTTCTTGCATATTCACTCAACAGGGTCGCAAAGGCATAAACCAGGATGCCATGATTGTGTGGGAAGAATTCATGTCAGAGGATATGATATTTTGCGGTGTATTCGATGGTCATGGACCTTATGGTCATCTTGTTGCTAAAAAAGTGAGGGATATGCTGCCTGTAAAGTTACAATCATTCTTCCAGTCTTCTCAGTCGAAGCAAAACGGTTCTGCGAAAGCCTGTTTTCGAAGGAATTTGAAGAAACCGGATTGTGAGGAGGATCCTGAGAAAGAAGGTTTTGTGGAGGATGTTCTAAATTCTGCATGGAGAGAAGCATTTTTAAACTCATATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTGGACTGCTTTTGTAGTGGTAGTACTGCTGTCACCATAGTAAAACAGGGATCAAATCTTTTCATGGGAAATATAGGGGACTCTCGGGCGATCCTTGCCTCCAAGGACACGAATGATTCCACCGTGGCAATCCAGTTGACAGTTGATCTTAAGCCAGATTTGCCTAAAGAAGCCGAACGAATAAAGCGGTGTAAAGGTAGAGTTTTTGCATTGCAAGATGAGCCTGAAGTGCCAAGAGTATGGTTACCTTTTGATGATGCGCCTGGTTTAGCTATGGCTCGGGCATTTGGCGATTTCTGTTTGAAGGAATATGGAGTGATCTCAATACCCGAATTCTCTCATCGAACCCTTACGGAGAGTGATCAGTTCATTGTTCTTGCCTCAGATGGGGTGTGGGATGTGTTAAGCAATGAAGAGGTGGTCGATGTAGTGTCCTCAGCCCCAACCCGATCATCAGCTGCAAGGTTCGTGGTCGACTCTGCTGCTCGTGAATGGAAACTCAAATACCCTACTTCAAAGATGGATGACTGTGCAGTTGTCTGCTTATTTCTGGACGGGAAGATGGACTCAGAATCTGACTATGATGAGCAAGGATTTTCATCCGCGACACTACGAAGTAATCATTCTGGTACTGCTGTTGAATCAGACGACGGCCAGAAGTCCGAGCCATCTTTGCAAAGGAATAACACTGTCAGATCATCTGAAGAAAATGAAACTCTTGGGGCATTACCTATTGATGATGTAGAGATTGGGGAGGCAGTATCTTCAGAAGATCAAAACTGGTCGGGATTGGAAGGCGTCACGCGAGTAAACTCACTTGTTCAACTTCCTAGATTTTCCGAGGAAAGGCCAAAATCATAA | 1428 | 44.75 | MGGCVSTSSHSTCSSQSNGEAATSSACLGIRCRGRRRTKRTFSDHVHALQHLPSAPNRIFMNGKSQSSCIFTQQGRKGINQDAMIVWEEFMSEDMIFCGVFDGHGPYGHLVAKKVRDMLPVKLQSFFQSSQSKQNGSAKACFRRNLKKPDCEEDPEKEGFVEDVLNSAWREAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAILASKDTNDSTVAIQLTVDLKPDLPKEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTESDQFIVLASDGVWDVLSNEEVVDVVSSAPTRSSAARFVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATLRSNHSGTAVESDDGQKSEPSLQRNNTVRSSEENETLGALPIDDVEIGEAVSSEDQNWSGLEGVTRVNSLVQLPRFSEERPKS | 475 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1106621 | 1109000 | + | evm.model.ptg000013l.165 | HCH7g0165 | 547450 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g0165 | 475 | CDD | PP2Cc | 66 | 373 | IPR001932 | - | |
| HCH7g0165 | 475 | MobiDBLite | consensus disorder prediction | 380 | 435 | - | - | |
| HCH7g0165 | 475 | ProSiteProfiles | PPM-type phosphatase domain profile. | 67 | 373 | IPR001932 | - | |
| HCH7g0165 | 475 | Gene3D | - | 58 | 375 | IPR036457 | - | |
| HCH7g0165 | 475 | MobiDBLite | consensus disorder prediction | 384 | 426 | - | - | |
| HCH7g0165 | 475 | SMART | PP2C_4 | 51 | 371 | IPR001932 | - | |
| HCH7g0165 | 475 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| HCH7g0165 | 475 | Pfam | Protein phosphatase 2C | 156 | 350 | IPR001932 | - | |
| HCH7g0165 | 475 | FunFam | probable protein phosphatase 2C 52 | 58 | 376 | - | - | |
| HCH7g0165 | 475 | PANTHER | PROTEIN PHOSPHATASE | 68 | 372 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
| HCH7g0165 | 475 | SUPERFAMILY | PP2C-like | 57 | 375 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0895 | HCH-Chr10:11363640 | HCH7g0165 | HCH-Chr7:1106621 | 2.90E-88 | dispersed | |
| HCH6g1641 | HCH-Chr6:49424891 | HCH7g0165 | HCH-Chr7:1106621 | 5.80E-24 | dispersed | |
| HCH6g1717 | HCH-Chr6:49832513 | HCH7g0165 | HCH-Chr7:1106621 | 1.90E-82 | dispersed | |
| HCH7g0165 | HCH-Chr7:1106621 | HCH8g0724 | HCH-Chr8:43940579 | 6.10E-30 | dispersed | |
| HCH10g0033 | HCH-Chr10:280843 | HCH7g0165 | HCH-Chr7:1106621 | 1.20E-111 | transposed | |
| HCH10g0615 | HCH-Chr10:5015305 | HCH7g0165 | HCH-Chr7:1106621 | 7.70E-121 | transposed | |
| HCH12g0517 | HCH-Chr12:3021538 | HCH7g0165 | HCH-Chr7:1106621 | 1.30E-72 | transposed | |
| HCH8g0281 | HCH-Chr8:15645117 | HCH7g0165 | HCH-Chr7:1106621 | 5.90E-108 | transposed | |
| HCH9g0809 | HCH-Chr9:5595394 | HCH7g0165 | HCH-Chr7:1106621 | 9.60E-94 | transposed | |
| HCH2g0802 | HCH-Chr2:51605235 | HCH7g0165 | HCH-Chr7:1106621 | 7.20E-185 | wgd |
Pathway information