Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0172 ATGGATTGGAAGAGATCTTCTTTTGGGCAATGCAATTTGAGGATCTGTGTGCAGGTTTTAGTTGGATTTGTGATCTGTGCAGCTCAGGTTTTACGTGGGATTACGAATCCCGGCGATTTTACTGCTATCAGTAACTTGCATACGGCACTGGGACTCCCTGTTCTTCCTGGATGGGGCATTGGGCAAGACCCTTGTGGTGATGCATGGCAGGGTGTTGTATGTAATGATTCAAGCATAATTAAAATAGTTCTTAATGCCGCCAATCTGGGAGGTGAACTGGGTGACAACTTGGGAATATTTTCTTCCATCAGAATAATTGATCTAAGCAACAATCATATAGGGGGAAGTATTCCATCCAGTTTACCTGTTACCTTGCAGAACATTTTTCTGTCAGCTAACGAGTTCACCGGTTTCATTCCAATTTCATTATCATTTTTGACTCAACTGACAGCCATGTCATTGAATGATAATAGCTTGAGCGGACAAATACCCGATTCCTTTGAGTCCATTGCTGGACTGGTCAATCTAGATTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCGTCTCTAGAAAATTCGTTGGCTTTGACCACCCTACACTTGCAGAATAATCAGCTATCAGGGACCCTTGACGTTCTACAAGACCTTCCACTAAAAGACTTGAATATAGAGAACAATCTTTTTAATGGACCCATACCTGAGAAGTTGCTGAATATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCCTCTGTTTCTCCAACATCTCCAACATCTCCAACAACTCCAACATCTCCGGCATCTCCATCAAAACCAGCAGCAGCACCATCACCACCACTTTCTGGAGCGCCACCTTCTCGACAAAGACCCAGGAAACAGGCTGATGGACCATCTGCGCCAGAGGAATCGAGTTCTGGAGGAAATAAGAAAAAACACCCTAAAAAGGTTGTTTGGATAGCAATTGCAGTGGTGTTGTCATTCATAATTTTGGTTTTGGCCTGTATTCTTTTTATGCCAAGGTGCAAAAGAAGGAGAATGGCCGATAGTATTTCCAAGCGACATCAAATAGGTGCTTATAGAGGCGAGAGAGAGAATGCTGGGAATGATAGATCCATGGATCAAACGACTAATCAGATACCAAAAGTTCCAAAAGAGGCAGTTGTAAGGCCAAAGCAGGAGAGTCAGATCGAGACTCAGAAGATTCCAAAAGCTTATGAAGAGAGAGAGAGAAACAGGCTAAGAATGGATGCTATTCCAAAGAAGGATAATCATGAGATAGATATGAGCACACTTGATGTCTACCTAATGCCCCCTCCTCCTCCACCACCACCTCCCCCTCCACCTCCCCCTCCCCCTCCACCTCCACCTCCACCTCCACCTCCTGTTCAAACGGTCACTGTTGAGTCCATTGGTCCAGCTGAAGTTACCTCCATGAAGCCTCCCACCAAACAGAGAATCACCCCAACTTTTGCAAAATCTTTCACAATTGCATCTCTTCAGCAATATACAAATAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGTTGGGGAGTGTTTATAGGGCACATCTTCCTAATGGAAAGATACTAGCTGTCAAGAAACTGGACAAGAGAGCTTTCAGTCAGCAAAAGGATGATGAGTTCTTTGAGTTAGTGAATAGTATTGATAAAATTCGGCATCCTAATGTAGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTAATCTATGAGTATTGCAGTAATGGGGCATTACAGGATGCACTCCACTCAGATCCCGAGTTTAGAAAGAAACTTTCTTGGAATGCTCGTATTAGAATGGCTCTTGGAGCAGCAAGAGCCTTGGAGTATCTGCATGAGTTTTGTCAGCCACCTGTTATCCATAGAAATTTCAAGTCTGCAAATATCCTACTCGATGATGATCTTTCGGTGCATCTTTCAGATTGTGGTCTGTGTCCTTTAATATCAAAAGGATCTGTCAGTCAGCTATCAGGACAGCTTCTGTCAGCCTATGGTTATGGTGCACCAGAATTTGAATCGGGTATTTATACCCTTGAAAGTGATGTTTACAGTTTTGGCGTCGTTATGTTGGAACTTCTAACTGGTCGGATGTCATATGACAGAACAAGGAGCCGAGGTGAGCAATTTTTAGTCAGATGGGCAATCCCTCAGCTTCATGACATAGAGGCATTAACAAGGATGGTTGATTCTTCACTCAATGGTCAATACCCTGCCAAATCCTTATCATACTTTGCCGATATCATATCCCGGTGTGTTCAGTCGGAGCCCGAATTCCGGCCACCAATGTCCGAAGTTGTCCAAGACTTGCTCAACATGATAAGGAGAGAACCGCATGGTAGCGGTTCAAGTGAAGGTTGA 2397 43.64 MDWKRSSFGQCNLRICVQVLVGFVICAAQVLRGITNPGDFTAISNLHTALGLPVLPGWGIGQDPCGDAWQGVVCNDSSIIKIVLNAANLGGELGDNLGIFSSIRIIDLSNNHIGGSIPSSLPVTLQNIFLSANEFTGFIPISLSFLTQLTAMSLNDNSLSGQIPDSFESIAGLVNLDLSNNNLSGPLPPSLENSLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFNGPIPEKLLNIPNFRKDGNPFNSSVSPTSPTSPTTPTSPASPSKPAAAPSPPLSGAPPSRQRPRKQADGPSAPEESSSGGNKKKHPKKVVWIAIAVVLSFIILVLACILFMPRCKRRRMADSISKRHQIGAYRGERENAGNDRSMDQTTNQIPKVPKEAVVRPKQESQIETQKIPKAYEERERNRLRMDAIPKKDNHEIDMSTLDVYLMPPPPPPPPPPPPPPPPPPPPPPPPPVQTVTVESIGPAEVTSMKPPTKQRITPTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAHLPNGKILAVKKLDKRAFSQQKDDEFFELVNSIDKIRHPNVVELSGYCAEHGERLLIYEYCSNGALQDALHSDPEFRKKLSWNARIRMALGAARALEYLHEFCQPPVIHRNFKSANILLDDDLSVHLSDCGLCPLISKGSVSQLSGQLLSAYGYGAPEFESGIYTLESDVYSFGVVMLELLTGRMSYDRTRSRGEQFLVRWAIPQLHDIEALTRMVDSSLNGQYPAKSLSYFADIISRCVQSEPEFRPPMSEVVQDLLNMIRREPHGSGSSEG 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1136776 1142775 + evm.model.ptg000013l.172 HCH7g0172 547457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0172 798 Pfam Protein tyrosine and serine/threonine kinase 510 782 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH7g0172 798 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 39 787 IPR046959 -
HCH7g0172 798 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 36 262 - -
HCH7g0172 798 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 474 585 - -
HCH7g0172 798 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 586 795 - -
HCH7g0172 798 Gene3D Transferase(Phosphotransferase) domain 1 586 790 - -
HCH7g0172 798 SUPERFAMILY Protein kinase-like (PK-like) 483 782 IPR011009 -
HCH7g0172 798 ProSiteProfiles Protein kinase domain profile. 508 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0172 798 MobiDBLite consensus disorder prediction 434 466 - -
HCH7g0172 798 MobiDBLite consensus disorder prediction 436 466 - -
HCH7g0172 798 Gene3D Ribonuclease Inhibitor 42 259 IPR032675 -
HCH7g0172 798 SUPERFAMILY L domain-like 55 242 - -
HCH7g0172 798 SUPERFAMILY Formin homology 2 domain (FH2 domain) 453 463 - -
HCH7g0172 798 Gene3D Phosphorylase Kinase; domain 1 473 585 - -
HCH7g0172 798 MobiDBLite consensus disorder prediction 248 314 - -
HCH7g0172 798 Pfam Leucine Rich Repeat 102 121 IPR001611 GO:0005515(InterPro)
HCH7g0172 798 Pfam Leucine Rich Repeat 149 169 IPR001611 GO:0005515(InterPro)
HCH7g0172 798 Pfam Leucine Rich Repeat 173 193 IPR001611 GO:0005515(InterPro)
HCH7g0172 798 MobiDBLite consensus disorder prediction 261 287 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g1561 HCH-Chr4:12183257 HCH7g0172 HCH-Chr7:1136776 2.70E-98 dispersed
HCH6g0029 HCH-Chr6:457729 HCH7g0172 HCH-Chr7:1136776 5.50E-115 dispersed
HCH7g0172 HCH-Chr7:1136776 HCH12g0057 HCH-Chr12:291640 2.00E-65 dispersed
HCH14g0886 HCH-Chr14:36578168 HCH7g0172 HCH-Chr7:1136776 1.10E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81619 PF07714 PK_Tyr_Ser-Thr 5.10E-43 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0172 - - - 0.0