Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0202 ATGGTGACCAAAACAAGTGACAAGAACTTGGTCATTATCAGTTGGTCTGCAAAGGATTTGATGTCTTTTTTCCTTTTGTATTCATTTGTGTTTCTTGTTTCTTTCCTTAAATGTTTTGCCAAAGATGCATTAGAATTTAAGAGTTCTATAAGTGATGAGAGAGGGGATACTCTTGTATCAGCAGGAAAGAGATTTGAACTTGGATTTTTCACACCTTATGGTAGCTCTGATAGAAGAAGATATGTGGGAATATGGTATTATGAATCAACTCCACGTACCGTTGTTTGGATCGCCAATCGGGATAGGCCGCTTTCCGGTTCGAGTGGTGTCTTTACCATTGAAGATGAGGGCAACCTCAAGGTATTAGATGGAAGTGGGAAGCTTTATTGGTCAACAAACATTGGAAGTTCAGAATTTGATCACAGAATATTGAAGCTAATGGATAGTGGAAATCTTGTTTTGAGCTATGAAGATCAAGCTGAGAAAATTCTCTGGCAGAGTTTTGATTATCCAACTGATACATTTCTTCCAGGCATGAAAATGGATGAAAATCTAGTGCTGACTTCATGGAAAAGCTATGATGATCCAGCAAAAGGGAACTTCACTTTTCAGCTAGATGAAGAGGGAGGCCAATATGTTATTTGGAGGAGGTCAGTTAAGTATTGGAAAAGTGGAGTTTCAGGTAAATTTATAACCACTGATGAGATGCCAGCGGCATTGTTATACCTTCTGTCGAATTTCTCATCGAAAGCTGTGGAGAATGTGTCTGTTCCACATCTCACACCATCATTGTACATTGATACAAGAATGATATTGAACTTTTCGGGTCAGCTTCGATATCTTAACTGGGGTAGCCTCAAGGTCTGGTCTCAGATTTGGGTGGAGCCAAGAGATAGGTGCAGTGTGTATAATGTCTGTGGAGATTTTGCAAGCTGTAATAGTAAGGGTGGTATGGCATGCAAATGCCTGCCTGGTTTCAAGCCCACCTCTCCAGGAAGTTGGAATATTGGAGACTATTCAGGTGGATGCATCAGGAAGTCACCAATATGCGGTATCAACAACGAAAGCGACACGTTCTTGAGTTTAAAGATGATGAAAGCAGGAAACCCGGACTTTCGGTTCAATGCAAAGGATGACAATGATTGCAAAATGGAGTGTCTAAACAACTGCCAGTGCCAGGCTTACTCTTTTGTGGAAGCTAATATTACAAGGCAGGGTGGGATTGATAATTCTGCCTGTTGGATTTGGTCTGGAGATCTCAACAATCTCCAGGATGAGTTCGATGACGGTCGTGGCCTCAACGTTCGAGTAGCAGTTCAAGATCTAGAATTAACAGTCAGAAATTGTGAAATATGTGGCACAAACCTCATTCCTTATCCCCTAAGCACTGGACCTAAATGTGGAGACCCAATGTACTTCAATTTTAACTGCAATGTGGCTACTGGACAGGTAAGTTTTGAGGTACCTGGTGGAACATACAAAATTACACTCATCGATCCAGAAGCCCGGAAATTCGTCATTCAGACAAATGATGCTGGTGATTGTGGTGATAAAAATTGGATAAACAAAATCTTTCACCTAAACCAGTCATCTCCATTCCATGTGATTAACTGGTGCATCTTTAATGAGACCAATCCAGATAATTTTTCTTTGAGAACCAGCAATGAAGTCGAAATTGGTTGGGAGCCACCACTAGAGCCAACTTGTTCTTCAACTACAGACTGCAAAGACTGGCCATATTCAACTTGCAATATGACTGGAGATGGAAGGAAAAGATGCCTTTGTAAATCAAACTTTCACTGGAATAGATTTGGTTTGAATTGCAGCATAGATCACAGCAAAGTAAAGGATGGAAGAGGAAAGATGACATTCTCTGTGATCATAGTGACAACAATCACATGTATAGGCTTTCTTATGATTCTCTCCAGTGTTGTGTTTTATATCTATTTCTCCAAAAGTGGTCTCATTGAAAGACAAGAAAGCAGGAGAAACAGCCAAAAAGAACTAGTACACTTATATGATAATGAAAGACATGTCAAAGACCTGATCGAATCAGGCCAATTTAAAGAAGACGAGACAAATGGAATAGATATACCATTTTTTGATTTGGAAACAATTCGAGTCGCAACGAACAACTTCTCGAGTTCAAATAAGCTTGGACAGGGAGGTTTCGGGCCAGTTTACAAAGGTAAGTTTCCTAGTGGCCAGCTAATTGCTGTAAAGAGGCTATCAAGTGGTTCAGGACAAGGCTTTGAGGAATTTAGAAATGAGGTTTTGTTGATTGCAAAACTTCAACATCGAAATCTCGTTCGGCTTCTGGGCTATTGTGTTGAAGGAGATGAAAAGATGTTGCTTTATGAATATATGCCAAACAAAAGCTTAGATGCCTTTATATTTGATCAAAAGCTCAGAATACTTTTGGATTGGGACATGCGCTTCAATGTCATTTTAGGAATTGCTCGAGGCCTTCTTTATCTACACCAAGATTCAAGATTAAGAATCATTCATAGAGATTTAAAAACAAGCAACATTCTTCTAGACGAGGAGATGAATCCTAAAATATCTGACTTTGGCTTAGCCAGGATCTTTGGAGGGAAAGAAACTGCTGCAAATACCAAAAGGGTGGTGGGGACTTACGGTTACATGTCACCGGAATATGCATTGGATGGACTATTTTCGGTCAAGTCCGACGTCTTTAGCTTCGGTGTCGTCGTCATTGAGATCATAAGTGGAAAAAGAAACACGGGATTCTATCACACAGAGAAAGCTTTGAGTCTTTTAGGCTATGCATGGGATTTGTGGATGGAAGACAAAGGATTGGAGTTAAAAGACCAAACACTAAATGAAAATTGCAGAAGAGATGAATACTTGAAGTGTTTAAATATAGGACTATTATGTGTGCAAGAAGATCCTTGGGATAGACCAACCGTGTCCAATGTAGTATTCATGCTTGGCAGTGAAACTGCAACCCTTCCGACTCCGAAACAGCCCGCCTTTATCGTCCGGCGGTGCCCCTCGAGCAAAGCTTCTTCCTCTAGCAAACCAGAAACCTTCTCCAACAATGAGTTAACAGTCACCTTAAAAGAAGGTAGATAG 3096 40.37 MVTKTSDKNLVIISWSAKDLMSFFLLYSFVFLVSFLKCFAKDALEFKSSISDERGDTLVSAGKRFELGFFTPYGSSDRRRYVGIWYYESTPRTVVWIANRDRPLSGSSGVFTIEDEGNLKVLDGSGKLYWSTNIGSSEFDHRILKLMDSGNLVLSYEDQAEKILWQSFDYPTDTFLPGMKMDENLVLTSWKSYDDPAKGNFTFQLDEEGGQYVIWRRSVKYWKSGVSGKFITTDEMPAALLYLLSNFSSKAVENVSVPHLTPSLYIDTRMILNFSGQLRYLNWGSLKVWSQIWVEPRDRCSVYNVCGDFASCNSKGGMACKCLPGFKPTSPGSWNIGDYSGGCIRKSPICGINNESDTFLSLKMMKAGNPDFRFNAKDDNDCKMECLNNCQCQAYSFVEANITRQGGIDNSACWIWSGDLNNLQDEFDDGRGLNVRVAVQDLELTVRNCEICGTNLIPYPLSTGPKCGDPMYFNFNCNVATGQVSFEVPGGTYKITLIDPEARKFVIQTNDAGDCGDKNWINKIFHLNQSSPFHVINWCIFNETNPDNFSLRTSNEVEIGWEPPLEPTCSSTTDCKDWPYSTCNMTGDGRKRCLCKSNFHWNRFGLNCSIDHSKVKDGRGKMTFSVIIVTTITCIGFLMILSSVVFYIYFSKSGLIERQESRRNSQKELVHLYDNERHVKDLIESGQFKEDETNGIDIPFFDLETIRVATNNFSSSNKLGQGGFGPVYKGKFPSGQLIAVKRLSSGSGQGFEEFRNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLRILLDWDMRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETAANTKRVVGTYGYMSPEYALDGLFSVKSDVFSFGVVVIEIISGKRNTGFYHTEKALSLLGYAWDLWMEDKGLELKDQTLNENCRRDEYLKCLNIGLLCVQEDPWDRPTVSNVVFMLGSETATLPTPKQPAFIVRRCPSSKASSSSKPETFSNNELTVTLKEGR 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1396888 1400981 + evm.model.ptg000013l.202 HCH7g0202 547487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0202 1031 Pfam Domain of unknown function (DUF3403) 986 1031 IPR021820 GO:0004674(InterPro)
HCH7g0202 1031 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 38 997 - -
HCH7g0202 1031 CDD STKc_IRAK 719 984 - -
HCH7g0202 1031 Pfam S-locus glycoprotein domain 222 329 IPR000858 GO:0048544(InterPro)
HCH7g0202 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH7g0202 1031 Gene3D Transferase(Phosphotransferase) domain 1 789 993 - -
HCH7g0202 1031 ProSiteProfiles Protein kinase domain profile. 713 999 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0202 1031 ProSiteProfiles Bulb-type lectin domain profile. 43 167 IPR001480 -
HCH7g0202 1031 Pfam D-mannose binding lectin 93 190 IPR001480 -
HCH7g0202 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 789 992 - -
HCH7g0202 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 678 788 - -
HCH7g0202 1031 SMART ntp_6 354 437 IPR003609 -
HCH7g0202 1031 MobiDBLite consensus disorder prediction 1006 1031 - -
HCH7g0202 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 36 168 - -
HCH7g0202 1031 ProSiteProfiles PAN/Apple domain profile. 350 438 IPR003609 -
HCH7g0202 1031 Pfam Protein tyrosine and serine/threonine kinase 716 981 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH7g0202 1031 SUPERFAMILY Protein kinase-like (PK-like) 698 1015 IPR011009 -
HCH7g0202 1031 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 196 IPR036426 -
HCH7g0202 1031 Gene3D Phosphorylase Kinase; domain 1 676 788 - -
HCH7g0202 1031 CDD PAN_AP_plant 350 438 - -
HCH7g0202 1031 Gene3D - 39 168 IPR036426 -
HCH7g0202 1031 SMART blect_4 49 171 IPR001480 -
HCH7g0202 1031 CDD B_lectin 55 171 IPR001480 -
HCH7g0202 1031 SMART serkin_6 713 983 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0202 1031 Pfam PAN-like domain 350 422 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0775 HCH-Chr2:51402848 HCH7g0202 HCH-Chr7:1396888 8.80E-260 dispersed
HCH3g0177 HCH-Chr3:1151830 HCH7g0202 HCH-Chr7:1396888 2.60E-95 dispersed
HCH6g0743 HCH-Chr6:41900208 HCH7g0202 HCH-Chr7:1396888 4.80E-124 dispersed
HCH7g0202 HCH-Chr7:1396888 HCH7g0221 HCH-Chr7:1485491 7.10E-100 dispersed
HCH7g0198 HCH-Chr7:1371912 HCH7g0202 HCH-Chr7:1396888 1.80E-106 proximal
HCH14g0858 HCH-Chr14:36383985 HCH7g0202 HCH-Chr7:1396888 1.90E-159 wgd
HCH2g0774 HCH-Chr2:51395714 HCH7g0202 HCH-Chr7:1396888 2.10E-277 wgd
HCH3g0593 HCH-Chr3:4079324 HCH7g0202 HCH-Chr7:1396888 1.00E-157 wgd
HCH6g0719 HCH-Chr6:40672283 HCH7g0202 HCH-Chr7:1396888 1.80E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81621 PF07714 PK_Tyr_Ser-Thr 5.40E-44 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0202 - - - 0.0