Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0228 | ATGTCTGAATTCAACGGGCAGATTCCAACTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACCGTCCAAGGATTGAAGAAGGAATTCAGTTATAACAAGATACTCAAGGACCTGAAAAAGGAGTTCTGCTGCAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTCATACAACTCCAGGGAGACCAAAGAAAGAATGTGTCTGCCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAACATCAAGATTCACGGCTTCTAA | 342 | 46.2 | MSEFNGQIPTAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSAFLVQAGIVKKENIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1517254 | 1518123 | + | evm.model.ptg000013l.228 | HCH7g0228 | 547513 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0228 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743(InterPro) | |
HCH7g0228 | 113 | Gene3D | - | 2 | 113 | - | - | |
HCH7g0228 | 113 | FunFam | Eukaryotic translation initiation factor SUI1 | 2 | 113 | - | - | |
HCH7g0228 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 3 | 113 | - | GO:0003723(PANTHER) | |
HCH7g0228 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
HCH7g0228 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
HCH7g0228 | 113 | NCBIfam | translation initiation factor SUI1 | 7 | 113 | IPR005874 | GO:0003743(InterPro) | |
HCH7g0228 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743(InterPro) | |
HCH7g0228 | 113 | SUPERFAMILY | eIF1-like | 6 | 113 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH6g0771 | HCH-Chr6:42473771 | HCH7g0228 | HCH-Chr7:1517254 | 1.20E-56 | dispersed | |
HCH6g0794 | HCH-Chr6:42704891 | HCH7g0228 | HCH-Chr7:1517254 | 1.00E-44 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0228 | K03113 | - | csv:101219651 | 222.631 |