Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0251 ATGTTGATCAAAATGACGATATCTCCCGGCGGAGTTCCCTCCATACCATCATCAATACCACCGCCGACCACTTCCTTACCGGTAAAAACCATCCCCGGCGGGTACGGTTTTCCGGTGGTCGGACCGTTCATCGACCGGTTAGATTATTTCTGGTTCCAAGGGCCTGAGAAATTCTTCAGAAGTAGAATGGAAAAGTATAAAAGTACAGTTTTCAGAACAAATGTTCCTCCGTCATTTCCTTTCTTCCTTAACGTGAATCCTAACGTTGTTGCGGTTTTGGATTGTAAGTCGTTTTCGCATCTCTTCGACATGGAAATCGTCGAGAAGAAAAATGTCCTCGTCGGAGATTTCATGCCGAGTACTTCTTTCACCGGCGATTTGAGGGTTTGTGCTTATTTAGATACTCAAGAATCTCAACACTCAAAGGTAAAGAACTTCATTATAGACATTCTAAAGAGAAGCTCCAAGATTTGGATCCCGGAACTTACATCCAACATATCGACGACATTGGACACCATTGAATCCGATATCGCAAAGAACGGAAAATCGAACTTTTTTTTACCTCTTCAACAATCCCTTTTCAGTTTCTTCTCCAAAACCTTGGCCGGTGCTGACACTTCAAGAAACCCTGATATTGCAAAATCAGGCACTTTCAGTATCGACATATGGCTCGGCCTTCAGCTCCTTCCAACCATCAACATTGGCATACTTCAGCCTCTTGAAGAGATTTTCCTTCACTCTTTCGCTTATCCCTTCTTTCTCATTGGTGGCCAGTATAGAAAACTTTATGAATTCATTGAAAAAGAAGGTGAAGAAGTGATTCGTCGAGGTGAAGTCGAATTTGGGCTAACTAAGAAAGAAGCGATTCACAATATTCTATTCACATTGGGATTCAATGCGTATGGTGGATTCTCTATTTTTTTACCCGGTTTACTCGGTCAAATCGCGAGTGACAAAACCGGATTGCAAGAAAGGCTACGTAAGGAAGTGAGGGAAAAAGCCGGACCAACTTTAACATTTGACTCGGTTAAAGAACTAGACCTCGTTCACTCAGTTGTATACGAGACACTTCGGCTCAGTCCACCGGTTCCGTCCCAATTCGCCCGAGCGAGGAAAGATTTTCTGCTCACTTCACATGACTCGGTTTTCAGCATCAAGAAAGGCGAGTTGCTATGCGGATATCAACCGCTTGTGATGAGGGACCCGAAGGTTTTCGATGAACCAGAGGCTTTTAAACCGGATCGATTTAGGGGCGAGAAAGGGGCCGAGTTATTGAACCACCTTTTTTGGTCAAATGGACCGCAGACCGGGACACCGAGCGAGTATAATAAGCAGTGTGCGGCCAAGGACTTGGTGGTGCTAACGGCCTGTGTGTTTGTTGCTCATATCTTTCAAAGGTATGATTCTATCACAGGGGACTCCGGTTCAATCACAGCCGTTCAAAGGGCAAAGTGA 1455 44.6 MLIKMTISPGGVPSIPSSIPPPTTSLPVKTIPGGYGFPVVGPFIDRLDYFWFQGPEKFFRSRMEKYKSTVFRTNVPPSFPFFLNVNPNVVAVLDCKSFSHLFDMEIVEKKNVLVGDFMPSTSFTGDLRVCAYLDTQESQHSKVKNFIIDILKRSSKIWIPELTSNISTTLDTIESDIAKNGKSNFFLPLQQSLFSFFSKTLAGADTSRNPDIAKSGTFSIDIWLGLQLLPTINIGILQPLEEIFLHSFAYPFFLIGGQYRKLYEFIEKEGEEVIRRGEVEFGLTKKEAIHNILFTLGFNAYGGFSIFLPGLLGQIASDKTGLQERLRKEVREKAGPTLTFDSVKELDLVHSVVYETLRLSPPVPSQFARARKDFLLTSHDSVFSIKKGELLCGYQPLVMRDPKVFDEPEAFKPDRFRGEKGAELLNHLFWSNGPQTGTPSEYNKQCAAKDLVVLTACVFVAHIFQRYDSITGDSGSITAVQRAK 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1733306 1737073 - evm.model.ptg000013l.251 HCH7g0251 547536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0251 484 PRINTS E-class P450 group IV signature 383 397 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0251 484 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0251 484 PRINTS E-class P450 group IV signature 399 417 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0251 484 SUPERFAMILY Cytochrome P450 26 470 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0251 484 Pfam Cytochrome P450 322 423 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0251 484 PANTHER CYTOCHROME P450 26 31 467 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
HCH7g0251 484 CDD CYP74 60 476 - -
HCH7g0251 484 Gene3D Cytochrome P450 26 482 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0251 484 FunFam Allene oxide synthase, chloroplastic 26 483 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0251 HCH-Chr7:1733306 HCH7g0605 HCH-Chr7:5720060 2.20E-96 dispersed
HCH7g0251 HCH-Chr7:1733306 HCH4g0686 HCH-Chr4:4463666 7.40E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0251 K10528 - csv:101223126 681.404