Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0359 | ATGGGCCTCTCTAGTCTCCCAGCTCCATCCGAAGGAGTCCTCGGCGTGCTTCTCGTAAACACTGCACTATCGATTTCCATATTCAAATACATTGTTCAATTGATCCTCCATATAGTAGGATTTCGTCTCCCATCACCACCGTCAGATTCCTCTGAGAACTCCCGAGAATTGAGAGATTCCCATTTTGGTTCCTTTGGGAGTTACATTGAGGAGTTTCGGAACCGAAATCCCGCAATCCGTTTTGACAGAGTACATGGATGCAAACGTCAAGAACATGACTGCTCGGTCTGCTTGACTCGGTTCGAACCCGAATCAGAGATAAATCACTTGTCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGTCCTCTTTGTAGGACTCCTCTTATGCCAGCAGAAGAAATGTCTTGCTTTTGGTGA | 450 | 46.22 | MGLSSLPAPSEGVLGVLLVNTALSISIFKYIVQLILHIVGFRLPSPPSDSSENSRELRDSHFGSFGSYIEEFRNRNPAIRFDRVHGCKRQEHDCSVCLTRFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMPAEEMSCFW | 149 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2591459 | 2591908 | - | evm.model.ptg000013l.359 | HCH7g0359 | 547644 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0359 | 149 | PANTHER | - | 1 | 148 | IPR044249 | - | |
HCH7g0359 | 149 | SUPERFAMILY | RING/U-box | 89 | 141 | - | - | |
HCH7g0359 | 149 | Pfam | Ring finger domain | 93 | 136 | IPR001841 | - | |
HCH7g0359 | 149 | SMART | ring_2 | 94 | 135 | IPR001841 | - | |
HCH7g0359 | 149 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 142 | IPR013083 | - | |
HCH7g0359 | 149 | ProSiteProfiles | Zinc finger RING-type profile. | 94 | 136 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH7g0359 | HCH-Chr7:2591459 | HCH9g1181 | HCH-Chr9:17842095 | 2.30E-07 | dispersed | |
HCH2g0644 | HCH-Chr2:50249077 | HCH7g0359 | HCH-Chr7:2591459 | 1.40E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0359 | K16285 | - | csv:101216645 | 229.565 |