Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0369 | ATGTTTAGAAAAAAGCAAACAAATTCTTCTTCATTCTTGTCCAAAATATTCCCATTAGAACCTTTTGCATGCAGGTCATTCTGTATACATGCTAAAGAGAGAGATATGAAAATGGATGAAGAAAGAGAAACCAAAGAGCTACCTAGCTCTACTTTCTCAACTTTTGTGGATCAAATTAGGCCTTCAGACAAGGTGACATCAATTGATGTCTTTCAACTGCCTGCAGAAAATGGTGATTCCAAAGGCAATAGTGATGATGCATTCACTTCCTTTTCTCCTGCTATCAGTAGAGAATTCTCCAAGAAGTGGATGACATTTGAAAGAGAAAACTCTTCTCCTGCAAAGACAGACATAAAGAGCTTAAGTTGTCGAAATTGGCCATCTTTCGGTGAACTCTCAGAAGCAAACATGACAGAGAAGGCTGCAAAAGACATAAAGAGCTTAAGTTGTCGAAATTGGCCATCTTTAAGTGAACTCTTAGAATCAAACATGACAGAGAAGACAGCAAAGGAAAACAAGAATGATGTTGTGTCTTCACTGCAACAGACATTTGTTGTCTCTGATGCAACAAAACCAGATTACCCTATCATGTTTGCCAGTGAAGGGTTCTTGGTTATGACCGGATATACGTCAGAGGAAGTTATCGGAAGGAACTGTCGGTTTCTTCAAGGGCTAGAGACGGATAAGCATGAAGTGGCCAAAATAAGAGATGCAATCAGAAAGGGGAATAGCTACTGTGGAAAGCTCTTGAACTACAAGAAGAATGGTACTCCTTTCTGGAATTTTTTCACTATTGGCCCTATCAAAGATCCACAAGGCAACATCATCAAATTTATTGGAATTCAGGTTGAGATCAGCAAATACACACAAGAAAAACCGAAGGCAATCGAGTTCATTACAGAGGTCCAAACTGTGAAAAGCCTAAGATCTTATCCGCATTCAAATAGGCATGATGCTGATATAAAACATGAAGAACAAGAAATAACCAACCCTGATTATGCTCTGCCTAAAGCTGTTGATGATAAGAATATTAGAACACGTGATGACCGAAAATATGAGTTAGATCTCAGAAATGATCTATCCTATTTGAAATCATATGAGGATTCCAGCATGGAATCAGGAATATCAGGTCTTGTTTCCTCAACGGGGTTCAAAAAAAAGCCTCTAGGATCAGTGGTTGAACATGAAGAGAAGACAGCTATGAAAACAACAAAGCATTATGAAATTGACTGTTCAGGCAGAAATCGTGATGCTAATCGAGAAAGAGACATACGTCAAGGAATCGATTTAGCAACCACATTGGAAAGGATAGAGGAAAATTTTGTGATTACTAACCCAAGACTTCCTGATAATCCTATTATATTTGCATCAGAAAAATTTCTTGACGTCACAGAATACAGGAGTGAAGAAGTTTTGGGAAGAAACTTTTGGTTTCTTCAAGGATCTGAAACAGATCAAGCAACTGTCTCAAAGATAAAAGATGCAATTGAAGAACAGAGAGAAGTATCTGTTCAGATAATCAACTACACAAAGAGTGGAAAGAAGTTCTGGAACTTATTCCACTTGCAACCAATGTGTGATAGGAAGGGCGAGCTTCAATACTTCATCAGCGTGCAATTCGATGTAAATCCTTCAAGCGAACGAACTTCAAAACGAACTGAACATCAAAGTGCTAAGCTGGTCAAAGCGATAGCACGGAAAGTCGATCAGGCTGTCCGCGAATTCCCTGATGCCAACTTGAAACCAGAAGATCTGTGGACAATCTATTGTCAGCCGGTCTTACCAAGGCCTCACAAGAAGTACAATTCTTCTTGGATAGCCCTACAAAATATTTCAAGCCATGGTGAAAAGATTGGCTTCCATCATTTTGAGCCAATAAAGCCACTGGGTTTTGGAGATATTGGCAGTGTTCATTTGGTAGAACTGAAAGGAACGGGAGAACTATTCGCTATGAAGGCAATAGAGAAGTCACTTATATTAAAGCGTAACAAGGTTCATCGAGTGTGCATGGAAAGGGAGATTATCGCACTCTTGGATCACCCTTTTCTTCCATCGCTGTACTCTTCATTTCAGACTCCTACACATGTTTGTTTGATAACGGACTATTGCGCCGGTGGAGACTTGTTTGCCTTACTTGACAGGCAGCCAATGAAGATGTTTAAAGAGGAAGCTGCTAGGTTCTATGCTGCAGAAATCGTCATCGCCTTGGAATACCTTCACTGTCTAGGAATTACTTATAGAGATCTAAAGCCTGAAAACATTCTACTCCAGAAGGATGGACATATTGTCCTTGCTGACTTTGATTTATCGGTTCGGGCATCTCAAGTGCAGCTTAAAATGAGAGGGAGATCTAGAAGAAAATCACCACCTGTGTTTGTTGCAGAACCAGTTGCACTACTGAATTCATTCATTGGAACTGAAGACTACATCGCTCCTGAAATTATTATGGGAGCAGGCCACAATTGCTCTGTTGACTGGTGGACTCTTGGTATATTGTTGTATGAAATGCTCTATGGACGCACTCCTTTCAAAGGCAAGAACAGGCAAAAAACATTTGCTAATGTTTTAGACAAAGACTTGACTTTCCCATTTAGTATTCCGGTAAGTCTTGCAGCAAGGCAGTTGATTGATGCACTGCTACAGAGAAAACCCAGTCGTCGTCTAGGATCAAGGACAGGTGCCGATGAAATCAAGCGACACCCTTTCTTTCAAGGAATAAAGTGGTCTAAACTCAGATCCATGATACCACCATTATCAGATGCAGCTCTTGTAATTGAAAAAGCTCCAAAAAGTAAAGATTTAAAGTGGGAAGATGGAGTTCCAAGTCATTCCAAAAACAGTGATATTTTCTGA | 2853 | 39.89 | MFRKKQTNSSSFLSKIFPLEPFACRSFCIHAKERDMKMDEERETKELPSSTFSTFVDQIRPSDKVTSIDVFQLPAENGDSKGNSDDAFTSFSPAISREFSKKWMTFERENSSPAKTDIKSLSCRNWPSFGELSEANMTEKAAKDIKSLSCRNWPSLSELLESNMTEKTAKENKNDVVSSLQQTFVVSDATKPDYPIMFASEGFLVMTGYTSEEVIGRNCRFLQGLETDKHEVAKIRDAIRKGNSYCGKLLNYKKNGTPFWNFFTIGPIKDPQGNIIKFIGIQVEISKYTQEKPKAIEFITEVQTVKSLRSYPHSNRHDADIKHEEQEITNPDYALPKAVDDKNIRTRDDRKYELDLRNDLSYLKSYEDSSMESGISGLVSSTGFKKKPLGSVVEHEEKTAMKTTKHYEIDCSGRNRDANRERDIRQGIDLATTLERIEENFVITNPRLPDNPIIFASEKFLDVTEYRSEEVLGRNFWFLQGSETDQATVSKIKDAIEEQREVSVQIINYTKSGKKFWNLFHLQPMCDRKGELQYFISVQFDVNPSSERTSKRTEHQSAKLVKAIARKVDQAVREFPDANLKPEDLWTIYCQPVLPRPHKKYNSSWIALQNISSHGEKIGFHHFEPIKPLGFGDIGSVHLVELKGTGELFAMKAIEKSLILKRNKVHRVCMEREIIALLDHPFLPSLYSSFQTPTHVCLITDYCAGGDLFALLDRQPMKMFKEEAARFYAAEIVIALEYLHCLGITYRDLKPENILLQKDGHIVLADFDLSVRASQVQLKMRGRSRRKSPPVFVAEPVALLNSFIGTEDYIAPEIIMGAGHNCSVDWWTLGILLYEMLYGRTPFKGKNRQKTFANVLDKDLTFPFSIPVSLAARQLIDALLQRKPSRRLGSRTGADEIKRHPFFQGIKWSKLRSMIPPLSDAALVIEKAPKSKDLKWEDGVPSHSKNSDIF | 950 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2662668 | 2671258 | + | evm.model.ptg000013l.369 | HCH7g0369 | 547654 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0369 | 950 | SMART | pac_2 | 503 | 545 | IPR001610 | - | |
HCH7g0369 | 950 | SMART | pac_2 | 246 | 288 | IPR001610 | - | |
HCH7g0369 | 950 | Gene3D | PAS domain | 415 | 575 | - | - | |
HCH7g0369 | 950 | CDD | STKc_phototropin_like | 621 | 917 | - | - | |
HCH7g0369 | 950 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 744 | 756 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH7g0369 | 950 | PANTHER | FLIPPASE KINASE 1-RELATED | 559 | 921 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
HCH7g0369 | 950 | ProSiteProfiles | PAC domain profile. | 243 | 297 | IPR000700 | - | |
HCH7g0369 | 950 | Pfam | Protein kinase domain | 624 | 903 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0369 | 950 | ProSiteProfiles | PAC domain profile. | 500 | 554 | IPR000700 | - | |
HCH7g0369 | 950 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 442 | 542 | IPR035965 | - | |
HCH7g0369 | 950 | Gene3D | Transferase(Phosphotransferase) domain 1 | 707 | 917 | - | - | |
HCH7g0369 | 950 | Gene3D | Phosphorylase Kinase; domain 1 | 622 | 706 | - | - | |
HCH7g0369 | 950 | SMART | pas_2 | 428 | 497 | IPR000014 | - | |
HCH7g0369 | 950 | SMART | pas_2 | 171 | 244 | IPR000014 | - | |
HCH7g0369 | 950 | ProSiteProfiles | Protein kinase domain profile. | 623 | 903 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0369 | 950 | Gene3D | PAS domain | 183 | 331 | - | - | |
HCH7g0369 | 950 | CDD | PAS | 196 | 285 | IPR000014 | - | |
HCH7g0369 | 950 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 190 | 283 | IPR035965 | - | |
HCH7g0369 | 950 | FunFam | Protein kinase C | 706 | 921 | - | - | |
HCH7g0369 | 950 | NCBIfam | PAS domain S-box protein | 452 | 544 | IPR000014 | - | |
HCH7g0369 | 950 | NCBIfam | PAS domain S-box protein | 196 | 290 | IPR000014 | - | |
HCH7g0369 | 950 | CDD | PAS | 449 | 542 | IPR000014 | - | |
HCH7g0369 | 950 | Pfam | PAS domain | 449 | 542 | IPR000014 | - | |
HCH7g0369 | 950 | Pfam | PAS domain | 190 | 286 | IPR000014 | - | |
HCH7g0369 | 950 | SMART | serkin_6 | 623 | 903 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g0369 | 950 | SUPERFAMILY | Protein kinase-like (PK-like) | 600 | 918 | IPR011009 | - | |
HCH7g0369 | 950 | ProSiteProfiles | PAS repeat profile. | 169 | 218 | IPR000014 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH2g1136 | HCH-Chr2:54029545 | HCH7g0369 | HCH-Chr7:2662668 | 1.20E-237 | dispersed | |
HCH3g1038 | HCH-Chr3:14475731 | HCH7g0369 | HCH-Chr7:2662668 | 4.10E-87 | dispersed | |
HCH5g1047 | HCH-Chr5:12511927 | HCH7g0369 | HCH-Chr7:2662668 | 4.40E-59 | dispersed | |
HCH7g0369 | HCH-Chr7:2662668 | HCH9g0115 | HCH-Chr9:603573 | 1.40E-89 | dispersed | |
HCH11g0014 | HCH-Chr11:661138 | HCH7g0369 | HCH-Chr7:2662668 | 1.80E-53 | transposed | |
HCH1g0716 | HCH-Chr1:55997970 | HCH7g0369 | HCH-Chr7:2662668 | 5.10E-48 | transposed | |
HCH8g1345 | HCH-Chr8:48336948 | HCH7g0369 | HCH-Chr7:2662668 | 9.10E-58 | transposed | |
HCH14g0744 | HCH-Chr14:35712754 | HCH7g0369 | HCH-Chr7:2662668 | 5.30E-87 | wgd | |
HCH2g0628 | HCH-Chr2:50079413 | HCH7g0369 | HCH-Chr7:2662668 | 4.40E-290 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81628 | PF00069 | Pkinase | 1.10E-61 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0369 | K20715 | - | csv:101213364 | 1139.79 |