Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0391 ATGTGGGGTTTTTTGGAAGTGAGAGGTTTGAATAAGAAGAAGGAGATGAGAGGGGTTGAAGAGAGAAAGTTATGTGAAGAATTTTCAGCAGGGTATTATGGTCTTTGCACTGTGGGAGGAATGCTTAGTGCTGGGACTACCCATCTTGCTATTACACCTCTAGATGTCTTGAAAGTTAATATGCAGGTAAACCCGATCAAGTACAACGGCATTTCTTCTGGATTTTCTATTCTTTGGAAGGAACAAGGTCCTTCATCCCTTTGGAGAGGTTGGTCAGGCAAGTTATTTGGATATGGTGTTCAAGGCGGGTTCAGATTTGGTCTCTATGAGTACTTTAAGAAATTTTACTCCGACTTACTCGAAGATAATAATATCAGAAGGAGTTCCATATACTTTCTCAGCAGTGCATCTGCTCAAGTTTTTGCTGATGTGGCTCTCTGTCCTTTTGAAGCTGTCAAGGTCCGTGTCCAAACGCAACCCTTTTATGCAAAGGGTTTGGCTGATGGGTTTCCTAAGCTATATTATAGTGAAGGACTTTCAGGTTTCTACAGAGGACTTCTTCCACTTTGGGGACGGAATCTTCCATTTGCCATGATTATGTTCTCGACGTTTGAGCATTTGGTGGACTTCACATATCAAAAAATCATTCGAAGGCGAAAGGAAGATTGCTCAAGATCACAACAGCTGGGTGTTACCTGTTTAGCTGGCTATGCAGCTGGAGCTGTTGGTACTGTTGTCTCAAACCCAGCTGACAACATTGTTTCCTCTCTTTACAATAAGAAGGCCAAAAATATCGCGCAGGCAGTGAAGAACATAGGATTTGTTAATCTATTTACCAGAAGTCTTCCTGTTAGAATTGCACTCGTTGGTCCTGCGATTACTTTGCAATGGTTCATCTATGACTCCATTAAAGTGCTCAGTGGCCTGCCTGCTAGTGGAGGGCTTAACAGGCAATCGGAAGAAGCTAACCTAACAACTTGA 981 42.51 MWGFLEVRGLNKKKEMRGVEERKLCEEFSAGYYGLCTVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYNGISSGFSILWKEQGPSSLWRGWSGKLFGYGVQGGFRFGLYEYFKKFYSDLLEDNNIRRSSIYFLSSASAQVFADVALCPFEAVKVRVQTQPFYAKGLADGFPKLYYSEGLSGFYRGLLPLWGRNLPFAMIMFSTFEHLVDFTYQKIIRRRKEDCSRSQQLGVTCLAGYAAGAVGTVVSNPADNIVSSLYNKKAKNIAQAVKNIGFVNLFTRSLPVRIALVGPAITLQWFIYDSIKVLSGLPASGGLNRQSEEANLTT 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2816573 2819802 - evm.model.ptg000013l.391 HCH7g0391 547676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0391 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 115 IPR018108 -
HCH7g0391 326 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 18 315 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
HCH7g0391 326 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 34 307 - -
HCH7g0391 326 Pfam Mitochondrial carrier protein 131 211 IPR018108 -
HCH7g0391 326 Pfam Mitochondrial carrier protein 37 117 IPR018108 -
HCH7g0391 326 SUPERFAMILY Mitochondrial carrier 36 301 IPR023395 -
HCH7g0391 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 210 IPR018108 -
HCH7g0391 326 Gene3D Mitochondrial carrier domain 36 306 IPR023395 -
HCH7g0391 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 306 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0391 HCH-Chr7:2816573 HCH9g0028 HCH-Chr9:172362 1.70E-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0391 K15102 - csv:101219895 537.724