Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0478 ATGAGAATCTTCGGCAACTTTCCGGCTACCTCCGCCGTGAAATGGTTGGGGTTCGTCACCGCCGTCTGGGTCCAAGCCATTTCCGGCAACAATTACACGTTTTCCAATTACTCCGACGCTCTCAAGACTCTTATGAATCTTTCCCAACTTCAACTAAACAATCTCTCTGTCGCTAAAGACGTCGGAAAGGCTTTTGGTATTCTTGCCGGTCTTGCTTCCGACAGGTTTCCGACGTGGTTGATTTTGGTTATTGGGTCTGTTGAAGGGTTATTGGGTTATGGAGTTCAGTGGCTTGTTGTAAGTGAAAGAATTGATCCATTACCTTATTGGCAGATGTGCATCTTCCTCTGCATGGGAGGCAACAGCACCACATGGATGAACACAGCCGTACTCGTTACTTGCATGAGAAACTTCCGTCAAAACAGAGGCCCCGTTTCCGGCATTCTCAAGGGCTACGTCGGTCTTAGTACCGCCATTTTCACCGATCTCTCCTCCGCTCTTTTCGCCAATGACCCCGCTTCCTTCCTCCTCATGCTTGCCCTCGTCCCCTTTGCCGTTTGCCTCACTGCCATATTCTTCCTCCATGAAGTCCCACCCTCCGTCACTGGCTCCGAAGAAGAAAGAGAAGAATTCCAATACTTTTCGGTCTTCAATGCCGTCGCTGTCACCGTTGCCGTTTACCTCTTGGTGTTCGATTCGATATCGAAACCAAGTGTGATCTTGTCAAAGATCTTCTCAATCATATTGTTGGTTTTGTTAGCTTCTCCTCTTGTAATTCCCATGCATTCATTATTCAAGAGATGGGATATGGGACGGTCGGGTATGGAGGAAGTGGGTCGGGTTACTGCCCCGTTGTTGGTCGTGGCGGTAGCGGAGACGGAGGTGGTGATGAAGAGGAAGGTGGAGATAGGAGAAGAGCATACGATTATGGAGGCAGTAAAGACTATGGAATTTTGGATTATGTTTGTGTCGTTTTTGTGTGGAGTGGGGACGGGATTGGCAGTGATGAATAATATGGGTCAAATCGGGTTGGCTCTCGGGTATGCGGATGTATCCAACTTTGTTTCGCTTACTAGTATTTGGGGTTTTTTCGGGCGGATCGTTTCGGGTTCGGTTTCGGAGCATTTCATCAAGAAAGCTGGGACGCCTAGGCCATTGTGGAATGCAGCTTCTCAAATTCTAATGGCAGTTGGCTACATTCTCTTAGCGATCGCCATGCCTGGCTCCTTATACATTGGCTCAATCGTGGTCGGCATTTGCTACGGTGTTCGTCTCGCCATCACCGTCCCGACTGCCTCCGAACTCTTCGGCCTCCGATACTACGGTTTGATCTACAACATTCTAATCCTCAACCTCCCCCTTGGTTCCTTCCTTTTCTCCGGGCTTCTTGCCGGCATTCTCTACGACATCGAGGCAACCGCCAGGGGCGGAGGCGGCAACACCTGCACCGGAGCCCATTGTTACAGGCTTGTGTTTGTGGTGATGGCCGGGGCCAGTGTTGTTGGGCTGGGGATGGACTTATTGTTGTCCATTAGAACCAAAAGATTATACGCCAAAATGAGAGCAACCAAGAGATGGAATAAGGCACTTGTGTCCTAA 1599 49.59 MRIFGNFPATSAVKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLSQLQLNNLSVAKDVGKAFGILAGLASDRFPTWLILVIGSVEGLLGYGVQWLVVSERIDPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFRQNRGPVSGILKGYVGLSTAIFTDLSSALFANDPASFLLMLALVPFAVCLTAIFFLHEVPPSVTGSEEEREEFQYFSVFNAVAVTVAVYLLVFDSISKPSVILSKIFSIILLVLLASPLVIPMHSLFKRWDMGRSGMEEVGRVTAPLLVVAVAETEVVMKRKVEIGEEHTIMEAVKTMEFWIMFVSFLCGVGTGLAVMNNMGQIGLALGYADVSNFVSLTSIWGFFGRIVSGSVSEHFIKKAGTPRPLWNAASQILMAVGYILLAIAMPGSLYIGSIVVGICYGVRLAITVPTASELFGLRYYGLIYNILILNLPLGSFLFSGLLAGILYDIEATARGGGGNTCTGAHCYRLVFVVMAGASVVGLGMDLLLSIRTKRLYAKMRATKRWNKALVS 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3626169 3629871 + evm.model.ptg000013l.478 HCH7g0478 547763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0478 532 CDD MFS_Mch1p_like 14 503 - -
HCH7g0478 532 Gene3D MFS general substrate transporter like domains 12 296 IPR036259 -
HCH7g0478 532 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 519 - GO:0016020(PANTHER)
HCH7g0478 532 Pfam Nodulin-like 14 261 IPR010658 -
HCH7g0478 532 SUPERFAMILY MFS general substrate transporter 17 515 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0265 HCH-Chr6:3768863 HCH7g0478 HCH-Chr7:3626169 2.10E-93 dispersed
HCH7g0478 HCH-Chr7:3626169 HCH7g0824 HCH-Chr7:16840525 6.90E-83 dispersed
HCH6g1344 HCH-Chr6:47509233 HCH7g0478 HCH-Chr7:3626169 2.50E-59 transposed
HCH2g0539 HCH-Chr2:49198931 HCH7g0478 HCH-Chr7:3626169 3.00E-222 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0478 - - - 0.0