Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0502 ATGTGGTTACAAAAAGGAGTAAGTGTTAATGTTGGGAAAAAAGGAGGGGGAGGAGGAGGAGGAGGAGAAGCAGGAAATGGGTTGGTAGCTATTGCAATAGATAGAGAGAAAGGGAGTCAAAATGCTCTCAGATGGGCTGCTGATAATTTACTCTCAAGGGGTCAAACTGTTGTTTTAATCCATGTTATTCAGAGATCATCCATGACCGCTCCCTCCGTCATCGGCGCCGCCATCGTTTGTAATGGTGATGGTGATTTCACTGCTGAATCTGTTCATAAGCAGAAACTTGAAATGCAGACTAAGGATCTTTTTCTTACCTTCCATTGTTATTGTACTCGTAAGGATATTCAATGCCTTGATGTTATACTCGAAGATACGGACGTGGTGAAGGCATTGACAGAATACGTCTCTTACGCTGCGATTGAGAATTTAGTTCTCGGAGCTCCATCGAAACATGGATTTATCAGGTTTAAAACATCAAGCATAAGTAGCAGTGTATCAAAAGGGGCACCGGATTTCTGCACCGTACATGTGATATCGAAGGGGAAAGTTTCATCGTTGAGAAACGCTTCTCGTCCAGCTCCTTTCACTTCCCCTCTACGGGATTACATTCAGAAATTATGTAAACCAACCATTAAAGCATCAACCACTCCTCGACATAAGTTTAATTTAAGAGACAGGACATCATTCAAGCCTCGTAGTTTTCAGGAAGAAGCAACCAAGCCACAGCTTCTCAATGGAGGAGCAAGAACTTCTATTTCCAAGTTTAGTGGAGGGTTCTCTCAGTCAGACACTGACATATCCTTTGTAAGCTCCGGGAGACCAAGCACGGACCGGGCGTCTTCCATTGCATTGGACTTTCCTGATTCAGGTGTAAACTCGCGATTTTCAACGAGTTCGGAACAAAGCCTTGGATCTCTCCCATTTAGACCCAAATGGACAGACCTTAGTACCATCAATGATTTCTCATCTGCTTCAGATGAGAGCAGCATGACATCAAATTCCTGGTCATCACAGAACTTGGAGGATCCAGAACTTGAATTGAGAAGGCTGAAGCTAGAGCTGAAACAAACTATGGACATGTATAATACAGCATGTAGAGAAGCATTAACAGCAAAGCAGAAGACCACTGAACTTCATAACTGGAGACTTGATGAAGAACGGAGATTAGAAGAGGCACGACTTGCACAAGAAGCAGCGGTGGCTGCAGCGGAGCAGGAGAGAGTAAGGTGCAAGGCTGCAACGGAAGCAGCTGAGGCAGCTAAGAGGATTGCCGAATTAGAATCACAAAAAAGAGAAAACGTAGAGATGAAGGCCCTTAAAGAAGCAGAAAAGATGCAGAGAGCATTGAAAAATCTAACTAAGGGTGACATCAGGTATAGGAGATATACAATTGAGGAGATTGAAGAGGCAACAGAATATTTTGCACCATCACGGAAGATCGGTGAAGGAGGTTATGGACCTGTCTTTTCTGGCACGCTTGATCACACATCAGTTGCAGTCAAGGTTCTGCGTCCTGATGCATCTCAAGGAAGGGCACAGTTTCAACAGGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCAGAATATGGCATTCTAGTGTATGAGTACCTGTCTAATGGAAGTTTAGAGGATCGAATATCCCGGAAAGGGAACTCACCAGTTCTTTCTTGGCAAATGAGGTTTCGAATTGCTGCAGAAATTGCTACTGGCCTTTTGTTTCTCCATCAAAGCAAACCAGAGCCATTGGTGCACCGTGATCTCAAGCCAAGTAACATTTTGCTAGACCAAAACTATGTCAGCAAGGTAAGTGATGTCGGCTTGGCCAGACTTGTCCCTGTTGTAGCTGAAAATGTAACACAGTGCTGCATGACTTCAGCAGCTGGAACTTTCTGCTATATCGATCCTGAATATCAACAAACTGGAATGCTTGGTGTAAAATCCGACATTTATTCTCTTGGTATCATGCTTCTTCAACTAATTACAGCCAAGCCAGCCATGGGATTGACTCACCATGTTGCTCGCTCCATTGAGAATGGCACTTTTAGGGAGAAGATGCTTGACCAAGCTGTGCTTGATTGGCCAATGGAACAAGCACTCCACTTTGCAAAATTAGCACTCCAGTGTTCTGAGCTTCGACGAAAAGACAGACCGGATCTTGGCACTGTCGTGTTGCCGGAACTTAATAAATTGAGAGAATTTGGTGAAGAAAAAATGAATCACATGGTATCAAGGAATAGCAGCAGCTCTTTTTTCAGTCTTACTGATCCTTCATTGCAGCAGGATGTGATGAGCGATCCACAAACAGGGAGTCCCAAGAGTCAATCCAGCACATCATCACCGGCAAGAGACTGA 2385 44.07 MWLQKGVSVNVGKKGGGGGGGGEAGNGLVAIAIDREKGSQNALRWAADNLLSRGQTVVLIHVIQRSSMTAPSVIGAAIVCNGDGDFTAESVHKQKLEMQTKDLFLTFHCYCTRKDIQCLDVILEDTDVVKALTEYVSYAAIENLVLGAPSKHGFIRFKTSSISSSVSKGAPDFCTVHVISKGKVSSLRNASRPAPFTSPLRDYIQKLCKPTIKASTTPRHKFNLRDRTSFKPRSFQEEATKPQLLNGGARTSISKFSGGFSQSDTDISFVSSGRPSTDRASSIALDFPDSGVNSRFSTSSEQSLGSLPFRPKWTDLSTINDFSSASDESSMTSNSWSSQNLEDPELELRRLKLELKQTMDMYNTACREALTAKQKTTELHNWRLDEERRLEEARLAQEAAVAAAEQERVRCKAATEAAEAAKRIAELESQKRENVEMKALKEAEKMQRALKNLTKGDIRYRRYTIEEIEEATEYFAPSRKIGEGGYGPVFSGTLDHTSVAVKVLRPDASQGRAQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYLSNGSLEDRISRKGNSPVLSWQMRFRIAAEIATGLLFLHQSKPEPLVHRDLKPSNILLDQNYVSKVSDVGLARLVPVVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIMLLQLITAKPAMGLTHHVARSIENGTFREKMLDQAVLDWPMEQALHFAKLALQCSELRRKDRPDLGTVVLPELNKLREFGEEKMNHMVSRNSSSSFFSLTDPSLQQDVMSDPQTGSPKSQSSTSSPARD 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3775906 3781131 + evm.model.ptg000013l.502 HCH7g0502 547787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0502 794 Pfam Universal stress protein family 30 171 IPR006016 -
HCH7g0502 794 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 445 547 - -
HCH7g0502 794 Pfam Protein tyrosine and serine/threonine kinase 478 733 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH7g0502 794 Coils Coil 417 447 - -
HCH7g0502 794 MobiDBLite consensus disorder prediction 218 249 - -
HCH7g0502 794 ProSiteProfiles Protein kinase domain profile. 475 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0502 794 MobiDBLite consensus disorder prediction 219 234 - -
HCH7g0502 794 Gene3D HUPs 29 181 IPR014729 -
HCH7g0502 794 MobiDBLite consensus disorder prediction 757 794 - -
HCH7g0502 794 SUPERFAMILY Protein kinase-like (PK-like) 458 734 IPR011009 -
HCH7g0502 794 Gene3D Phosphorylase Kinase; domain 1 440 547 - -
HCH7g0502 794 PANTHER OS02G0152300 PROTEIN 29 788 IPR051348 -
HCH7g0502 794 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 30 179 - -
HCH7g0502 794 CDD STK_N 28 182 - -
HCH7g0502 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH7g0502 794 Gene3D Transferase(Phosphotransferase) domain 1 548 762 - -
HCH7g0502 794 MobiDBLite consensus disorder prediction 235 249 - -
HCH7g0502 794 Coils Coil 387 407 - -
HCH7g0502 794 SMART serkin_6 475 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0366 HCH-Chr4:2415927 HCH7g0502 HCH-Chr7:3775906 4.00E-212 dispersed
HCH4g0521 HCH-Chr4:3418413 HCH7g0502 HCH-Chr7:3775906 1.80E-185 dispersed
HCH4g1495 HCH-Chr4:11307642 HCH7g0502 HCH-Chr7:3775906 5.90E-165 dispersed
HCH5g0667 HCH-Chr5:4825162 HCH7g0502 HCH-Chr7:3775906 3.90E-101 dispersed
HCH7g0502 HCH-Chr7:3775906 HCH7g1627 HCH-Chr7:48466000 1.50E-78 dispersed
HCH7g0502 HCH-Chr7:3775906 HCH12g0288 HCH-Chr12:1615446 3.40E-219 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81633 PF07714 PK_Tyr_Ser-Thr 1.20E-39 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0502 - - - 0.0