Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g0525 | ATGGATTTCCCTATCCAATTTCTCTTCATTCTCTCTTCTATTCTCTTCCTCTTCTTTGCTTTCATATCATATCTTCGTCGAAAACTACCCTATCCGCCTGGTCCTCGAGGCCTACCGATAATCGGTAACATGTTAATGATGAAGCAACTAAGTCACCGTAGCCTAGCGCGTCTCGCTAAGGACTATGGTGGTCTACTCCATCTCCGACTCGGCATGCTACACATGGTAGTCGTGTCGACACCGGAGATGGCTAGAGAAGTCCTCCAAGTACAAGATATCGCGTTTGCTAATCGCCCCGCAAACGTCGCGATAACCTACTTAACATACGACCGAGCGGATATGGCATTCGCTAACTATGGTCCATTTTGGCGCCAAATGAGGAAGATATGTGTTATGAAGCTCTTCAGTCGTAAACGAGCTGAGTCATGGGCTTCGGTTCGGGAGGAAGTCGATGCCGTGATTCGAACCGTTTCGACGAGAGTTGGCGAACCGGTTAATATTGGAGAATTGATATTTGGTCTAACTCGGAATATAACGTATAAGGCAGCATTTGGTTCCAACTCTCATGAGGGACAAGATGAGTTTGTGGTTATATTACAAGAATTCTCTAAATTGTTTGGAGCTTTTAATATAGCTGATTTTTTTCCATGGCTTGGATGGATTCATGGAAGAGAATTCAATGAAAGAATGGAGAAAGCTAGGAAAGCGCTTGATGTGTTCATTGATAGTATAATTGATCAACACATGATGAAGAAGAAGAAAAAGGAAGATGAATTTGAATTTGAACAAGATTCAGATATGGTTGATGAATTAATGGCTTTCCTTGCTGATGATGAATCGAGCAAGAACGATGTTGATGACTCACAATCATCCCTTAGACTCACTAGAGATCATATCAAAGCCATAATCATGGACGTGATGTTCGGGGGAACAGAGACAGTCGCATCAGTGATTGAATGGACAATGGCGGAGCTCATGAAAACTCCAAACGAACTCATAAAAGTCCAACAAGAACTCACCGACGTCATAACCCTAAACCGTAAATTTCACGAATCCGACCTCGAAAAACTCACCTACTTAAAATTCACCGTCAAAGAAACCCTCCGTCTTCATCCTCCAATCCCTCTTCTCCTCCACGAAACCGCCGTAGACACCGCCGTCGCCGGTTACTTCATTCCAAAAAACTCAAGGGTTTGGGTAAACGCATGGGCAATTGGGCGGGATAAAAATGCATGGAGCGATGCAGATAGTTTTAGGCCGTCAAGGTTTATGAATGAAAGCGCTCCGGATTTTAAAGGGAGTGATTTTGAGTTTATTCCGTTTGGGTCTGGCCGGAGATCTTGCCCGGGAATGCAATTAGGGTTATATGCGTGTGAAATGGCGGTGGCTCAGCTTCTGCATTGTTTCAAATGGGAGCTTCCGAATGGAATGAAAAGTGATGAACTTGATATGAATGATGTGTTTGGACTTACTGCTCCCAGAGCCGTACAACTCGTCGCCGTCCCCAGTTTTCGCCTCCATTCCACCGCGTTTCAAAGGTAA | 1542 | 44.36 | MDFPIQFLFILSSILFLFFAFISYLRRKLPYPPGPRGLPIIGNMLMMKQLSHRSLARLAKDYGGLLHLRLGMLHMVVVSTPEMAREVLQVQDIAFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVDAVIRTVSTRVGEPVNIGELIFGLTRNITYKAAFGSNSHEGQDEFVVILQEFSKLFGAFNIADFFPWLGWIHGREFNERMEKARKALDVFIDSIIDQHMMKKKKKEDEFEFEQDSDMVDELMAFLADDESSKNDVDDSQSSLRLTRDHIKAIIMDVMFGGTETVASVIEWTMAELMKTPNELIKVQQELTDVITLNRKFHESDLEKLTYLKFTVKETLRLHPPIPLLLHETAVDTAVAGYFIPKNSRVWVNAWAIGRDKNAWSDADSFRPSRFMNESAPDFKGSDFEFIPFGSGRRSCPGMQLGLYACEMAVAQLLHCFKWELPNGMKSDELDMNDVFGLTAPRAVQLVAVPSFRLHSTAFQR | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4015481 | 4017437 | - | evm.model.ptg000013l.525 | HCH7g0525 | 547810 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g0525 | 513 | FunFam | Cytochrome P450 84A1 | 24 | 504 | - | - | |
| HCH7g0525 | 513 | PANTHER | CYTOCHROME P450 84A1-RELATED | 8 | 507 | IPR053062 | GO:0004497(PANTHER) | |
| HCH7g0525 | 513 | SUPERFAMILY | Cytochrome P450 | 32 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | CDD | CYP71-like | 62 | 498 | - | - | |
| HCH7g0525 | 513 | Gene3D | Cytochrome P450 | 24 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | Pfam | Cytochrome P450 | 32 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH7g0525 | 513 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0525 | 513 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH5g1077 | HCH-Chr5:16757357 | HCH7g0525 | HCH-Chr7:4015481 | 9.10E-197 | dispersed | |
| HCH7g0525 | HCH-Chr7:4015481 | HCH8g1434 | HCH-Chr8:48916939 | 3.50E-92 | dispersed | |
| HCH7g0525 | HCH-Chr7:4015481 | HCH14g0627 | HCH-Chr14:34986218 | 1.20E-196 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH7g0525 | K09755 | - | csv:101217850 | 771.155 |