Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0605 ATGACATCATCATCTTCTTCTTCCTCTAAACTCCCTCTGAAACCCATCCCCGGAACCTGTGGCTTCTCCATCTTTGGACCCATCAAAGACCGTTACGACTACTTTTACATCCAAGGCAAAGACGATTTCTTCCGTACCCGCATCAACAAATACCACTCCACCATTTTCCGGGTCAACATGCCACCCGGCCCGTTCATTTCCTCCGATTCAAGAGTCATCGTTCTCCTCGACGCCGTCAGTTTTCCGATTCTCTTCGACACTTCTAAAGTCGAGAAACGTAACATCCTCGACGGGACTTACATGCCCTCCTTGTCTTTCACCGGAAACATCCGTACATGCGCTTATCTAGACCCGTCGGAGCCGGAACACACTTCTCTAAAACGGTTATTCCTGTCTTTTCTCGCTTCCCGACACGGCAAGTTCATCCCCGTTTTCCGCAGTTCGTTGTCGGAGCTTTTTATCAAAGTCGAAGATAAGTTGGCTGAGAAGAAAATAGCTGATTTTAACCCTATAAGTGATAGTACGGGATTTGATTTCATTTTCCGGTTACTGACTGATCGGAGCCCGGACCCGAAACTTGGATCCGATGGACCGGGTTTGTTTGATAAATGGTTGACTTTTCAATTGGCTCCATTAGCTTCTTTGGGTTTACCCAAAATATTGAGCTGTTTTGAGGATATGATAATCCATACAATTCCTCTGCCGTTTTTCGTAGTGAAAAATGGATATAAAACTCTTTACGATGCGTTTTATGCGTCGTCTGGTTCGTTTCTTGATGAAGCTGAAAAACAAGGGATTGAGAGAGAGAAAGCTTGCCATAACTTGGTTTTTCTTGCTGGATTCAATGCTTATGGTGGAATGAAAGTCTTATTTCCTAGTTTAATTAAATGGGTCGGATCTGCCGGAGAACAACTTCATCAACAGCTCGCCGATGAGATAAGAGGCAGCGTGAAGGAAGAAAATGGGGTGACTTTTAGTGCATTGGAGAAAATGGAGTTGTTAAAATCAGTGGTGTACGAGGTATTGAGAATCGATCCACCGGTTCCATTTCAATACGCGAAAGCTAAGGAAGACATCATCGTAAACAGCCATGATGGAGCTTACGAGATCAAGAAAGGGGAGACCATTTTTGGGTATCAGCCATTTGCAACGAAAGATCCCAAAGTTTTTCAGAATCCTGAGGATTTTATAGGAGATAGATTCGTCGGAGAAGAAGGGAAGAAGCTTTTGAAATACGTTTACTGGTCAAATGGTCGGGAAACCGACAATCCGACACCGGAGGATAAGCAGTGTCCGGGGAAGAATCTGGTGGAGTTGTTGTGTAGGCTACTTCTGGTGGAGTTTTTTCTGCGTTATGACACGTTTACGGTTGAGATTGGTCAATTGCCTTTGGGTTCCTCCGTCAAGATTAAGTCGTTGACTAAAGCAACTGTTAAAGGGTGA 1443 44.35 MTSSSSSSSKLPLKPIPGTCGFSIFGPIKDRYDYFYIQGKDDFFRTRINKYHSTIFRVNMPPGPFISSDSRVIVLLDAVSFPILFDTSKVEKRNILDGTYMPSLSFTGNIRTCAYLDPSEPEHTSLKRLFLSFLASRHGKFIPVFRSSLSELFIKVEDKLAEKKIADFNPISDSTGFDFIFRLLTDRSPDPKLGSDGPGLFDKWLTFQLAPLASLGLPKILSCFEDMIIHTIPLPFFVVKNGYKTLYDAFYASSGSFLDEAEKQGIEREKACHNLVFLAGFNAYGGMKVLFPSLIKWVGSAGEQLHQQLADEIRGSVKEENGVTFSALEKMELLKSVVYEVLRIDPPVPFQYAKAKEDIIVNSHDGAYEIKKGETIFGYQPFATKDPKVFQNPEDFIGDRFVGEEGKKLLKYVYWSNGRETDNPTPEDKQCPGKNLVELLCRLLLVEFFLRYDTFTVEIGQLPLGSSVKIKSLTKATVKG 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5720060 5722168 - evm.model.ptg000013l.605 HCH7g0605 547890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0605 480 Gene3D Cytochrome P450 7 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 FunFam Allene oxide synthase, chloroplastic 11 478 - -
HCH7g0605 480 SUPERFAMILY Cytochrome P450 11 455 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 PRINTS E-class P450 group IV signature 368 382 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 CDD CYP74 45 471 - -
HCH7g0605 480 Pfam Cytochrome P450 306 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH7g0605 480 PANTHER CYTOCHROME P450 26 16 452 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0251 HCH-Chr7:1733306 HCH7g0605 HCH-Chr7:5720060 2.20E-96 dispersed
HCH7g0605 HCH-Chr7:5720060 HCH3g0383 HCH-Chr3:2482292 3.00E-08 dispersed
HCH4g0686 HCH-Chr4:4463666 HCH7g0605 HCH-Chr7:5720060 5.80E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0605 K01723 - csv:101211324 746.117