Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0634 ATGGTGGAATCAAAGTTAACCTACGAAGAATGTCGACGCCAGAGATTAGAAGAGAATAAGAAGAGAATGGAAGAGCTTAATCTTAACAAGCTCGCCGATGCTTTGAAATCTCCCAGCCCTAAACCCTCTCCGGCGAAGCAGTTGAAGCGTCATCGGGATATTTCGTCGCTCAGTGTGAGAAGATCCAGCCGTGTTGCTGATAAGCCCCCTCCGAATTATAAGGAAGTGCCTATTGAACCATTTTCAGGGATCCGAAGGAGCTATCAACGGAGAGATTTGTTGAATAGAGTTTATGCTTCACATGAAGAAAGAATTTATGCTATAGACAGAGCAACAGAAGTTCAAGCTAGTCTAGATTCTAGTTATCCAAGTTTTGTGAAGCCCATGCTTCAGTCACATGTCACCGGGGGATTTTGGCTGGGTTTACCAAATCACTTTTGCAAGAAAAACCTTCCCCATCATGATGAAATGGTTACTCTGGTGGATGAGGATGGAGATGAGTTCCCAACAAAATACCTTGCTGACAAAACAGGTCTTAGTGGTGGATGGAGAGGGTTTTCTCTTGATCACCAATTAGTAGATGGGGATGCTTTGGTGTTCCATTTAACTAAACCAACTGAATTCCAGGTATATATCATCAGGGCATATAATTTAGAAGATAAAGCAGATACTGACAATAGCGACAAGAATTCAGATGTTTCACAACTGGAAAACAGTGGCAAAAGAACTCGATCGACAAAAAGAGAATCAGACAACCGGAAAAAAGTAGAAGATAAAGCAGATACCGACAACAGCAACAAGAATTCAGATGTTTCACAACTGGAAAACGGTGGCAAAAGAACTCGATCGACAAAAAGAGAATCAGACAACCGGAAAAAAGTAGAAGATAAAGCAGATACCGACAACAGCAACAAGAATTCAGATGTCTCACAACTGGAAAACAGTGGCAAAAGAACTCGATTGACAAAAAGAGAATCAGACAACCGGAAAAAAGTAGAAGATAAAGCAGATACCGACAACAGCAACAAGAATTCAGATGTCTCACAACTGGAAAAAAGTGGCAAAAGAACTCGATCATCCGCAAGGAAAAAGTAG 1095 41.19 MVESKLTYEECRRQRLEENKKRMEELNLNKLADALKSPSPKPSPAKQLKRHRDISSLSVRRSSRVADKPPPNYKEVPIEPFSGIRRSYQRRDLLNRVYASHEERIYAIDRATEVQASLDSSYPSFVKPMLQSHVTGGFWLGLPNHFCKKNLPHHDEMVTLVDEDGDEFPTKYLADKTGLSGGWRGFSLDHQLVDGDALVFHLTKPTEFQVYIIRAYNLEDKADTDNSDKNSDVSQLENSGKRTRSTKRESDNRKKVEDKADTDNSNKNSDVSQLENGGKRTRSTKRESDNRKKVEDKADTDNSNKNSDVSQLENSGKRTRLTKRESDNRKKVEDKADTDNSNKNSDVSQLEKSGKRTRSSARKK 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6218175 6221755 + evm.model.ptg000013l.634 HCH7g0634 547919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0634 364 CDD B3_DNA 123 214 IPR003340 GO:0003677(InterPro)
HCH7g0634 364 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 12 219 IPR044837 -
HCH7g0634 364 MobiDBLite consensus disorder prediction 241 265 - -
HCH7g0634 364 Coils Coil 6 33 - -
HCH7g0634 364 Gene3D - 102 217 IPR015300 -
HCH7g0634 364 ProSiteProfiles B3 DNA-binding domain profile. 125 216 IPR003340 GO:0003677(InterPro)
HCH7g0634 364 Pfam B3 DNA binding domain 125 215 IPR003340 GO:0003677(InterPro)
HCH7g0634 364 SUPERFAMILY DNA-binding pseudobarrel domain 118 215 IPR015300 -
HCH7g0634 364 MobiDBLite consensus disorder prediction 31 78 - -
HCH7g0634 364 MobiDBLite consensus disorder prediction 279 303 - -
HCH7g0634 364 SMART B3_2 125 216 IPR003340 GO:0003677(InterPro)
HCH7g0634 364 MobiDBLite consensus disorder prediction 222 364 - -
HCH7g0634 364 MobiDBLite consensus disorder prediction 317 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0880 HCH-Chr11:39712815 HCH7g0634 HCH-Chr7:6218175 2.40E-34 wgd
HCH4g0660 HCH-Chr4:4288397 HCH7g0634 HCH-Chr7:6218175 1.60E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
33869 PF02362 B3 9.90E-16 CL0405 HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0634 - - - 0.0