Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g0640 | ATGGAGCTTATAATCTCTGTTATTCTATACATATTCCTCTTTCTATCTTCTCTCTTCTCATTGATCTCAATTCCATTATTATTTCTAAAGAAGGAGAAGACGCAAAAAGCCAAACTTCCTCCAGGCTCCATGGGTTGGCCATGGATTGGAGAAACTCTTCATATATATTCTCAAGACCCAAACATCTTCTTCTCCCAAAAGCAAAAAAGATATGGAGAAATATTTAAAATCAACATTTTGGGGTGTCCCTGCGTGATGCTAACCAGTCCTGAGGCAGCTCGTTTCGTGCTGGTGACTCATGCTCATTTGTTCAAGCCCACGTATCCCAAAAGCAAAGAGAAAATGATTGGTCCTTCTGCCTTGTTCTTCCATCAAGGAGATTATCATTCTCATCTTAGAAAGCTTGTTCAGAATTCTCTCTCTCTTGAACGCATTAGAAACCTAATTCCCAGCATTCAAACTCTCGCTTTCTCTGCTATTCAGTCTTGGGCTTCTCCTTCTGCTGAGCCTGTCAATACCTTCATTGAAATGAAGAAGTTCACTTTCGATGTGGGAATTCTTGCAGTATTTGGTGAGCTAGAAAACAGCTACAAAGAAAAGCTCAAAGAAAATTACTGTATATTAGATAAAGGCTACAATTCTTTCCCAACTAGAATCCCAGGAACCGCATATTCTAAAGCACTATCGGCAAGAAAAAGTCTAACTGGGATTCTAAGCGAGATAATCTATGAGAGAAAAGAGAAGAGAGTAATGGAGAAAGATCTTTTGGGTCATCTTCTTAATTTCAGAGATGCAAAGGGTCAGTCGTTAACTGAGGATCAGATCGCCGATAACATCATCGGAGTTCTATTTGCAGCTCAGGACACGACAGCCAGTGTTCTTACATGGATCCTTAAATACCTCCATGACAACCAGAAGCTTTTTGAGGCTGTAAGGGCAGAGCAGATGGAAATATACAGAACAAATGGTGAAGGAAAGATGCCTCTGTCTTGGTCTCAGATTAAGAACATGCCTCTTACTTACAGGGTTGTACTTGAGAGCTTGAGGATGGCTAGCATTATTTCTTTCACTTTTAGGGAGGCAGTGGTTGATGTGGAATATAAAGGATACCTTATACCAAAGGGTTGGAAAGTGATGCCATTATTCCGGAATATTCATCATAACCCTGACTACTTCTCTGATCCTCACATCTTTGATCCCTCTAGATTTGAGGTAACTCCAAGAGCCAATACCTTCATGCCATTTGGCAACGGTGTACACGCTTGCCCCGGAAATGAACTTGCCAAGCTAGAGATCCTTGTCTTGATCCATCTCCTCGTTACTAAATTTAGGTGGGAAGTGGTGGGATCACAAAGTGGGATTCAATATGGGCCATTCCCAGTGCCTCTGCATGGACTACCAGCCAGATTTTGGGAAGAACCAACCAATAATAATCTCAACAAATAA | 1446 | 41.15 | MELIISVILYIFLFLSSLFSLISIPLLFLKKEKTQKAKLPPGSMGWPWIGETLHIYSQDPNIFFSQKQKRYGEIFKINILGCPCVMLTSPEAARFVLVTHAHLFKPTYPKSKEKMIGPSALFFHQGDYHSHLRKLVQNSLSLERIRNLIPSIQTLAFSAIQSWASPSAEPVNTFIEMKKFTFDVGILAVFGELENSYKEKLKENYCILDKGYNSFPTRIPGTAYSKALSARKSLTGILSEIIYERKEKRVMEKDLLGHLLNFRDAKGQSLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNQKLFEAVRAEQMEIYRTNGEGKMPLSWSQIKNMPLTYRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPDYFSDPHIFDPSRFEVTPRANTFMPFGNGVHACPGNELAKLEILVLIHLLVTKFRWEVVGSQSGIQYGPFPVPLHGLPARFWEEPTNNNLNK | 481 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 6303776 | 6307653 | - | evm.model.ptg000013l.640 | HCH7g0640 | 547925 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g0640 | 481 | PRINTS | P450 superfamily signature | 285 | 302 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | P450 superfamily signature | 413 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | P450 superfamily signature | 422 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | P450 superfamily signature | 342 | 353 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | Gene3D | Cytochrome P450 | 28 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PANTHER | CYTOCHROME P450 26 | 38 | 451 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| HCH7g0640 | 481 | SUPERFAMILY | Cytochrome P450 | 36 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | CDD | CYP90-like | 68 | 469 | - | - | |
| HCH7g0640 | 481 | Pfam | Cytochrome P450 | 40 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH7g0640 | 481 | FunFam | Abscisic acid 8 | 29 | 472 | - | - | |
| HCH7g0640 | 481 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | E-class P450 group I signature | 274 | 291 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | E-class P450 group I signature | 341 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | E-class P450 group I signature | 381 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g0640 | 481 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0616 | HCH-Chr12:3676969 | HCH7g0640 | HCH-Chr7:6303776 | 4.60E-187 | dispersed | |
| HCH6g1312 | HCH-Chr6:47261063 | HCH7g0640 | HCH-Chr7:6303776 | 2.70E-152 | dispersed | |
| HCH6g1355 | HCH-Chr6:47571321 | HCH7g0640 | HCH-Chr7:6303776 | 4.50E-68 | dispersed | |
| HCH4g0644 | HCH-Chr4:4222083 | HCH7g0640 | HCH-Chr7:6303776 | 6.00E-187 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH7g0640 | K09843 | - | csv:101219389 | 746.503 |