Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0644 ATGGGTATTTTCTCAAAGCAAAAATACTCAAGAACAGGGATGACCCATGAAAATTCAATGGTTTTAAATGGGGTTTCAGTTACGAACAAGAGGAAATGGACCCACTTTATGCCTTTGTTTGTGGCACTTGTTGTCATAGCGGAGATCGTATCTTTGTCTCGGATCGATATGGCAAAGAATGCAGCTATGGTTGATTCATGGGTTGATTTGTTTTATAGATCTCCTTCTTCTTTGCATGAAGTTAATGAATTGGGAAGTGAGATTTCGATTTCTAATAACGATGGATTAAGGGAATCCGTTAGTTGTGAGGATTGGTTGGAGAAGGAAGATTCTGTGGTGTTTTCTAGGGACTTTAAAAAGAATCCTGTTGTTGTTTCTGGTTCGGAGAAGGAGTGGAGAATTTGCGATGTGGGATGCCAGTTTGGATTTGATCCTAGTCAGAAACCTGATGCTGTATTTGGGACACCTCAACAAGGTAGAAGTGTTAGTGTACTTCGATCGATGGAATCATCACACTACTATCCAGAGAATGACATTGCTTTGGCAAGACGGAGGGGTTACTCTGTGGTTATGACCACTAGTCTATCATCGGACGTTCCCGTTGGATATTTTTCCTGGGCTGAATATGAGATTATGGCACCCGTGCAGCCAAAGACTGAGAGTGCCCTTGCAGCTGCCTTCATTTCAAACTGTGGTGCTCGCAACTTCCGCCTGCAAGCCCTTGATGCTCTTGAAAAGCTGAATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGTGATGGAAGAGTTGACAAAGTGGATACCTTGAAGCGCTATAAATTCAGCTTGGCTTTTGAGAATTCCAACGAGGAGGATTATGTCACTGAAAAGTTTTTCCAGTCTCTTGTTGCAGGAACCATCCCCGTGGTGGTTGGCGCTCCAAATATTAAGGAGTTTGCTCCTTCCCCTGATTCAATTTTGCATATCAAGGAAATTTCTGATATTGAGTCGGTTGCCAAGACCATGAAATACCTTGCTGAAAATTCCACAATGTACAATAAAGCATTAAGATGGAAGTATGATGGCCCATCTGATTCATTCAAGGCCCTTATAGATATGGCAGCAGTACACTCATCTTGCCGCCTTTGCATCCACTTGGCGACTATCATTCACGAGAAAGAAGAAAACAGTCCCGAGTTCAAGAAACGACCTTGCAAGTGCTCTCGAGGCTCAGAAACTGTATATCACTTATATGTAAGGGAGAGAGGGAGATTTGATAGGCAATCCGTTTTCTTGAGGTCCGGCGGTTTAACTTTGGAGGCCTTGGAAGCGGCAGTACTCGCAAAGTTTAATTCTTTAAAACACGTACCGATTTGGAAACAGGAAAGACCTGAAAGTTTAAGAGGAGGAGATGAATTGAAAATATACAGAATATATCCTGTTGGGTTAACACAGAGGCAGGCTTTATATAGCTTCAGATTTAAAGGTAATGATGATTTCAGAACTCACATAGAAAGACAACCTTGTGCAAAGTTTGAAGTCATATTTGTCTAA 1539 41.85 MGIFSKQKYSRTGMTHENSMVLNGVSVTNKRKWTHFMPLFVALVVIAEIVSLSRIDMAKNAAMVDSWVDLFYRSPSSLHEVNELGSEISISNNDGLRESVSCEDWLEKEDSVVFSRDFKKNPVVVSGSEKEWRICDVGCQFGFDPSQKPDAVFGTPQQGRSVSVLRSMESSHYYPENDIALARRRGYSVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTESALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNRDGRVDKVDTLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIKEFAPSPDSILHIKEISDIESVAKTMKYLAENSTMYNKALRWKYDGPSDSFKALIDMAAVHSSCRLCIHLATIIHEKEENSPEFKKRPCKCSRGSETVYHLYVRERGRFDRQSVFLRSGGLTLEALEAAVLAKFNSLKHVPIWKQERPESLRGGDELKIYRIYPVGLTQRQALYSFRFKGNDDFRTHIERQPCAKFEVIFV 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6472924 6479220 - evm.model.ptg000013l.644 HCH7g0644 547929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0644 512 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 130 388 - -
HCH7g0644 512 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 64 484 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
HCH7g0644 512 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 221 384 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
HCH7g0644 512 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 169 361 - -
HCH7g0644 512 Gene3D - 181 360 IPR038577 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0893 HCH-Chr11:39878831 HCH7g0644 HCH-Chr7:6472924 1.40E-205 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0644 K00753 - csv:101205170 862.448