Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0674 | ATGGATTCGAATTCTACTGATTCATCAACATCACCTACTGTTAAGTCCTCGGTATCTCAACCTCCAGACGTACAACCTCAGGCTACTGTTACCTCTGGATTGGATAATTCTAGACGTGGTACACCGTCTAAGCTATCTACTGCTGGCATAACATCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGCCGTCTGCACAAGATGGCTCAACTGAAAATGCTGGGAAATCTGCTTTTGCTCGTTTTACTAGTGGATTAGGTTTGAACTTATCTCCTAAAGCTGCTTCACCCACTGATTCCTCCGATGGAACTTCTAGAACTCAGCAACCCAGTTTTATGGGATCAATTACTAAAGGATTAGTTGACTCTTCAAAGAATGCTGTAAAGGCTGTACAGGTCAAAGCTCGTCATGTTGTCTCTCAAAATAAGCGAAGATACCAGGAAGGCGAATTTGATTTGGATATGACATATATAACTGAAAATATTATTGCTATGGGTTTCCCTGCTGGTGATATGAGCTCAGGGTTTTTTGGATACGTCGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATTAAGTTTTTTGAAACACAACACAAGGGAAAATACAAAGTGTATAATCTTTGTTCTGAGAGGCTATATGATGCATCCTTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGATCACAACTGTCCCCCAGCTCAACTGATCATATCATTCTGTCAAAGTGCTTACTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTGGTGCATTGTAAAGCAGGAATGGCTAGAACAGGCTTGATGATTTCCAGTCTCCTTCTATATTTGAAGTTTTTTCCAACTGCTGAGGAATCCATGGATTACTACAACCAGAAAAGGTGTTTTGATGGTAAAGGCCTGGTTTTACCTAGTCAGATTAGATATGTCAAATATTTTGAGCGTATTTTAACATACTTCAATGGAGAAAATCCTCCTGGCCGTAGGTGTATGCTTAGAGGATTTCGTCTCCACAGGTGTCCATATTGGATCAGGCCTGCTATTACCGTATCTGATCAAAATGGTGTTCTATTCTCCACTAAAACACATCCAAGAACCAAGAGTCTCTCGACAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGAATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAACTGAGTTGGTTGGGGACTTCAAGATCCATTTCCATGATCGCCAAGGAGATTTCTATTGTTGGCTAAACACGACCATGATTGAAAATCGAAAAATGCTCTACACTAGTGATCTTGATGGCTTTGATAAGAGGAAACTGCCTTCCCCCGGATTTCAGGTGGAGGTAGTTCTAGTCGATATACCTTCGAACATGGACAATGCTAGCAATAAATCGGATGAAAGCTCGGGCTCAACTGCAGTTGATGGGAGTGAAGTTCGTCCAAACCGAAATGGAAAATCAGGACCTCATGATAAAGATGATGTATTTTCTGACAGTGAATCAGCCAGCAAGACGATGTCTAATGCCAAAACAAGTTCAACTTCATCAGACGTTGCGAGTTTATCAAACGCAACGAAACAAGCTTCACTGTCAGACAGTGTAGCAAAACCCACTGCTCCTATTAGTGAGCCAAAAAGTGGTGATGTGGGCAGATCTGATTCTCTTCCGGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCCGATGCTTCTGTTTTCACATTTGGCGATGAAGAAGACTACGAGAGTGAGTAA | 1770 | 41.64 | MDSNSTDSSTSPTVKSSVSQPPDVQPQATVTSGLDNSRRGTPSKLSTAGITSWAKNLKISQPQPSAQDGSTENAGKSAFARFTSGLGLNLSPKAASPTDSSDGTSRTQQPSFMGSITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETQHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPAQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESMDYYNQKRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRRCMLRGFRLHRCPYWIRPAITVSDQNGVLFSTKTHPRTKSLSTEDFWFTAPKKGIMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMIENRKMLYTSDLDGFDKRKLPSPGFQVEVVLVDIPSNMDNASNKSDESSGSTAVDGSEVRPNRNGKSGPHDKDDVFSDSESASKTMSNAKTSSTSSDVASLSNATKQASLSDSVAKPTAPISEPKSGDVGRSDSLPEVPNSESEFKAMAADASVFTFGDEEDYESE | 589 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7539355 | 7544807 | + | evm.model.ptg000013l.674 | HCH7g0674 | 547959 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0674 | 589 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 157 | 324 | IPR029021 | - | |
HCH7g0674 | 589 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 131 | 531 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
HCH7g0674 | 589 | MobiDBLite | consensus disorder prediction | 487 | 502 | - | - | |
HCH7g0674 | 589 | CDD | PTP_PTEN | 154 | 319 | IPR045101 | GO:0016791(InterPro) | |
HCH7g0674 | 589 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 144 | 323 | IPR029023 | - | |
HCH7g0674 | 589 | SMART | PTEN_C2_2 | 328 | 456 | IPR014020 | - | |
HCH7g0674 | 589 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 258 | 297 | IPR000387 | GO:0016311(InterPro) | |
HCH7g0674 | 589 | ProSiteProfiles | C2 tensin-type domain profile. | 330 | 457 | IPR014020 | - | |
HCH7g0674 | 589 | MobiDBLite | consensus disorder prediction | 461 | 481 | - | - | |
HCH7g0674 | 589 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
HCH7g0674 | 589 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 399 | 454 | IPR035892 | - | |
HCH7g0674 | 589 | Gene3D | Protein tyrosine phosphatase superfamily | 129 | 326 | IPR029021 | - | |
HCH7g0674 | 589 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 129 | 326 | - | - | |
HCH7g0674 | 589 | MobiDBLite | consensus disorder prediction | 503 | 539 | - | - | |
HCH7g0674 | 589 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 260 | 270 | IPR016130 | GO:0016311(InterPro) | |
HCH7g0674 | 589 | MobiDBLite | consensus disorder prediction | 89 | 112 | - | - | |
HCH7g0674 | 589 | Pfam | PTEN2, C2 domain | 330 | 457 | - | - | |
HCH7g0674 | 589 | MobiDBLite | consensus disorder prediction | 461 | 569 | - | - | |
HCH7g0674 | 589 | Pfam | Polymorphic toxin system, DSP-PTPase phosphatase | 225 | 278 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH9g0272 | HCH-Chr9:1682633 | HCH7g0674 | HCH-Chr7:7539355 | 9.70E-40 | transposed | |
HCH14g0309 | HCH-Chr14:31751854 | HCH7g0674 | HCH-Chr7:7539355 | 1.40E-196 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0674 | K01110 | - | csv:101222304 | 976.081 |