Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g0676 | ATGGCATTGCATCAAAATGAACATCAAACTCATCATCAACAGCAGCAGCAACAAAACCCTTTATTTCTTTTGGACTGCCTCTACTGTGAGGAAGAAAAATGGGAAGATGAACAAGAACAGCAAGAACAAAACTATGAACTTCAACTAGAAGAATCCATTTTGGATGATGATGATAATGGCAGAAAAGAATGCTTCTCCTTTCTTTTGGAAGCCATCAGTCTGCTTGATGATGATCAAGAGCTAGACTCCTTGTTTTCCAAAGAACAAGAGAATCATCAAACCTCAGATTTGATAGAAACCGATCGGATTCACTTGTTGGCGAGGACGGAGGCTGTGGAATGGATTCTCAAAGTTAATGCTCATTATGGATTTCAATCACTCACAGCTCTCTTAGCCATTAATTATCTTGATAGAGTCCTCTCTGGCCCTCATTTTCAAAGAGACAAACCATGGATGGTTCAGCTTTTAGCTGTAACTTGCATCTCTTTAGCTGCAAAAGTGGAGGAAATTCAAGTCCCTCTTCTTCTAGACCTCCAGGTTGAAGATTCAAAGTATTATTTTGAAGCCAAAACAATACAAAGAATGGAGCTTTTGGTGCTTACTGCTCTGCAATGGAAGATGCATCCTGTAACCCCAGTTTCATTCCTTGATCTCATCATAAGAAGATTTGGATTGAGAACTCAGATTCAGATGGAGTTTTTTTGGCGTTGTGACCGTGTTCTTCTCTCTTTAGCCTCAGATTCAAGATCCGTGAGTTATCTTCCTTCTGTATTAGCTATCTCAACAATGGCAACCGTTATAGAACAGATGGGAAACTGTAACTCCATAGACTTTCTAGATCGACTCCTTAAATCCCTCAACATAAACAAGGAAAGAGTAAATGAGTGTTGCAATCTGATATTGGAGCTCTCAAAATCCAATACAAAAGCAGATCACAAAAACCATGGGAAGAGGAAGAATGAAGAAAGATCAGAAGTTCCAGAGAGCCCTAATGGAGTGATCGATGCCAGTTTTAGCTCTGATAATTCCAACGATTCGTGGGCTGTGGTGGGGACTAAATTGTCAGAAGAAGAAGAAGAAGAAGATTACTATTATTCACCTCATTCCAAAAGAAGCAGAGGCAGAGATCAGCCCCCCATGATTCTTCCTTCACTTATAAACAGGGTTTTTGTGGACCTTGTGACCAACCCTCCATAG | 1197 | 40.18 | MALHQNEHQTHHQQQQQQNPLFLLDCLYCEEEKWEDEQEQQEQNYELQLEESILDDDDNGRKECFSFLLEAISLLDDDQELDSLFSKEQENHQTSDLIETDRIHLLARTEAVEWILKVNAHYGFQSLTALLAINYLDRVLSGPHFQRDKPWMVQLLAVTCISLAAKVEEIQVPLLLDLQVEDSKYYFEAKTIQRMELLVLTALQWKMHPVTPVSFLDLIIRRFGLRTQIQMEFFWRCDRVLLSLASDSRSVSYLPSVLAISTMATVIEQMGNCNSIDFLDRLLKSLNINKERVNECCNLILELSKSNTKADHKNHGKRKNEERSEVPESPNGVIDASFSSDNSNDSWAVVGTKLSEEEEEEDYYYSPHSKRSRGRDQPPMILPSLINRVFVDLVTNPP | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7566241 | 7567850 | + | evm.model.ptg000013l.676 | HCH7g0676 | 547961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g0676 | 398 | CDD | CYCLIN_AtCycD-like_rpt1 | 107 | 205 | - | - | |
HCH7g0676 | 398 | Gene3D | - | 81 | 298 | - | - | |
HCH7g0676 | 398 | Pfam | Cyclin, C-terminal domain | 210 | 317 | IPR004367 | - | |
HCH7g0676 | 398 | CDD | CYCLIN_AtCycD-like_rpt2 | 210 | 300 | - | - | |
HCH7g0676 | 398 | FunFam | D6-type cyclin | 91 | 208 | - | - | |
HCH7g0676 | 398 | SMART | Cyclin_C_2 | 210 | 329 | IPR004367 | - | |
HCH7g0676 | 398 | MobiDBLite | consensus disorder prediction | 310 | 328 | - | - | |
HCH7g0676 | 398 | Gene3D | - | 94 | 208 | - | - | |
HCH7g0676 | 398 | PANTHER | CYCLINS | 44 | 304 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
HCH7g0676 | 398 | MobiDBLite | consensus disorder prediction | 310 | 380 | - | - | |
HCH7g0676 | 398 | Coils | Coil | 24 | 51 | - | - | |
HCH7g0676 | 398 | SUPERFAMILY | Cyclin-like | 77 | 208 | IPR036915 | - | |
HCH7g0676 | 398 | MobiDBLite | consensus disorder prediction | 333 | 350 | - | - | |
HCH7g0676 | 398 | Pfam | Cyclin, N-terminal domain | 83 | 207 | IPR006671 | - | |
HCH7g0676 | 398 | ProSitePatterns | Cyclins signature. | 108 | 139 | IPR048258 | - | |
HCH7g0676 | 398 | SMART | cyclin_7 | 113 | 201 | IPR013763 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH7g0676 | HCH-Chr7:7566241 | HCH9g0688 | HCH-Chr9:4591929 | 7.40E-21 | dispersed | |
HCH11g0922 | HCH-Chr11:40454716 | HCH7g0676 | HCH-Chr7:7566241 | 8.70E-33 | wgd | |
HCH12g0596 | HCH-Chr12:3496908 | HCH7g0676 | HCH-Chr7:7566241 | 4.60E-67 | wgd | |
HCH14g0311 | HCH-Chr14:31788478 | HCH7g0676 | HCH-Chr7:7566241 | 2.20E-66 | wgd | |
HCH4g0620 | HCH-Chr4:4058121 | HCH7g0676 | HCH-Chr7:7566241 | 6.20E-75 | wgd | |
HCH4g1861 | HCH-Chr4:48653593 | HCH7g0676 | HCH-Chr7:7566241 | 2.60E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g0676 | K14505 | - | csv:101222066 | 338.961 |