Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0690 ATGGGAAGCATTGAGGCAGAAAGAACAGTGACAGGATTTGCAGCCAGAGATCCATCTGGGTTTCTCTCACCTTATACTTACACAGTCAGAGAAACAGGACCAGAAGATGTTTATATCAGAGTTATTTGTTGTGGACTTTGCCATACTGATCTCCATAACATCAAGAATGATCTTGGCATGTCCAATTACCCCTTGGTTCCTGGCCATGAAGTGGTTGGTGAAGTTATAGAGGTAGGAAAGAATGTGAACAAGTTCAAAGTGAAGGATGTGGTGGGAGTTGGATGTATTGTTGGATCCTGTAAAAACTGTCTCCCTTGCACCACAGAACGCGAGCAATACTGCAACAAGAAGATCTGGACCAACAACGATATCGACATTGATGGCAGGCCTACTCAAGGCGGCTTCGCCACCGCTATGGTCATCGACCAAAAGTTTGTGGTGAAAGTACCAGATGGGATGTCACCGGAACAGGCGGCGCCACTGCTATGCGCCGGTGTGACGGTTTACAGCCCATTGAATCACTTTGGGTTGAAGCAGAGTGGATTGAGAGGAGGGATTTTGGGTCTAGGAGGAGTTGGTCATATGGGAGTGAAGGTGGCTAAGGCATTGGGACACCATGTCACAGTGATTAGTTCCTCCAACAAGAAGAGAAAAGAAGCTATGGAGGATCTCGGGGCCGACGAGTACTTGGTTAGCTCCGATGAGGCTCAGATGCAAACGGCAATTGACTCACTTGATTATATCATTGACACAGTGCCTGCAGTTCACCCTTTGGAGCCTTACCTTTCATTGCTGAAGCTGGATGGGAAATTGATCTTAATGGGTGTCATCAATACACCTCTTCAGTTTGTCACTCCCATGGTCATGCTTGGGAGGAAAACGATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACCCAGGATATTCTGGACTTCTTCAAAGAAAAGGAATTGAATTCAATGATTGAAGTAATAAAGATGGATTATATTAACAAAGCTTTGGAAAGATTGGAGAAGAACGATGTCAGATATAGATTCGTTGTGGATGTTGAAGGAAGCAGAGTTTAA 1068 45.22 MGSIEAERTVTGFAARDPSGFLSPYTYTVRETGPEDVYIRVICCGLCHTDLHNIKNDLGMSNYPLVPGHEVVGEVIEVGKNVNKFKVKDVVGVGCIVGSCKNCLPCTTEREQYCNKKIWTNNDIDIDGRPTQGGFATAMVIDQKFVVKVPDGMSPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSNKKRKEAMEDLGADEYLVSSDEAQMQTAIDSLDYIIDTVPAVHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMVMLGRKTITGSFIGSMKETQDILDFFKEKELNSMIEVIKMDYINKALERLEKNDVRYRFVVDVEGSRV 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7911404 7913736 - evm.model.ptg000013l.690 HCH7g0690 547975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0690 355 Gene3D - 13 350 - -
HCH7g0690 355 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
HCH7g0690 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
HCH7g0690 355 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
HCH7g0690 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
HCH7g0690 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
HCH7g0690 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
HCH7g0690 355 Gene3D - 164 320 - -
HCH7g0690 355 PANTHER ALDEHYDE REDUCTASE 8 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
HCH7g0690 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
HCH7g0690 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
HCH7g0690 355 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0167 HCH-Chr2:12912715 HCH7g0690 HCH-Chr7:7911404 4.40E-105 dispersed
HCH4g1854 HCH-Chr4:48369516 HCH7g0690 HCH-Chr7:7911404 2.50E-74 dispersed
HCH5g0607 HCH-Chr5:4228455 HCH7g0690 HCH-Chr7:7911404 1.30E-90 transposed
HCH4g1853 HCH-Chr4:48358294 HCH7g0690 HCH-Chr7:7911404 1.30E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0690 K00083 - csv:101214622 578.556