Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g0748 | ATGCGGGGACAACACCCACTAAAGCCGGGTCTCGCCGACGACGAGAATGAACCACTCCGCTCCACCGCAGGCGCCGGAATCAATGTCCCATTAGCCGCCGGAATCCGGAAGAAAGGGACCGGTGTCAGGGCATGGCTATTATTAGACTCAACCGGCGGAGCCCAAGTGGTGGAAGCCGGAAAACACGCCATTATGCGGCGGACCGGTTTACCGGCTCGTGATCTTCGGATTCTTGATCCGTTACTATCGTACCCTTCTACGATTCTAGGCCGTGAGAAAGCGATTGTGATAAATTTGGAACATATTAAAGCTATTATTACTGCCCAAGATGTCCTTTTGTTGAATTCTAGGGATCCTTCTGTTACCCCTTTTGTTGAAGAGCTTCAAAGGCGATTATTAAGACATCACCAAGCCACTAAAGCCGCTCAGGAGGGAAATGGCGATGAATCTAATTGGAGAAATCTGTATGATTTAGAGGAACCGCGGTCAAGGACTCAAAGTCCCCAAGCTTCTTACCAAGGATTTCCACAGGCTGAAGAAGGGGAGGAGGGAAAGGGAGGTGGGAAACAAAGTGTTGAAAATCGAGAAGGATTGAAGGTTCTTCCATTTGAGTTTGTTGCTTTGGAGGCATGTCTTGAAGCTGCTTGCAGCTGCTTAGAAAGTGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTAGATAAGCTCACTTCAAAAATTAGTACTCTCAATTTGGAACGTGTGCGCCAAATTAAAAGCCGTTTGGTTGCAATAACTGGACGAGTACAAAAGGTGCGGGATGAATTAGAACACTTACTCGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAGCTTGAAGACTCTTCCACTTCCTCAATTCTTGAGAGAGATGACTTGGATGATGAAGATCATCAATTAGGCAGAGATGACAGAATTCCTGCTGAAATATCATTGGAAAGTCGTGGGATTTCTGCTAATTATGAAGGCAATCTTCAAAGTATGGATGCCTCCCAGGATCATTTGTTTGGTGCATCAAATGTGCTTGGCAGGGATAGCCATGGGACCCGGACCAGTACTACCCATAGTGCTATAGGCAAGCAGCTTGATGTGGAGGAACTTGAGATGCTTTTGGAGGCATACTTCGTCCAAATTGATGGTACACTGAATAAACTTTCTACGCTGAGGGAGTACGTAGATGATACAGAAGATTATATCAACATAATGCTGGATGACAAACAGAACCATCTTCTACAAATGGGAGTAATGTTGACGACAGCAACCCTCGTCGTGAGCGCCTTTGTTGTGGTAGCAGGTATTTTCGGTATGAACATTCATATTGAACTATTTGAGCCCGAAAAAGCAGGTATGCCAGAGTTCCTATGGACTGTTGGCGGCGGCGCCACTGGAACAATCTTTTTGTATGTCATTGCCATTGCTTGGTGTAAGCACAAACGGTTGCTTGAGTAG | 1494 | 45.85 | MRGQHPLKPGLADDENEPLRSTAGAGINVPLAAGIRKKGTGVRAWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAQDVLLLNSRDPSVTPFVEELQRRLLRHHQATKAAQEGNGDESNWRNLYDLEEPRSRTQSPQASYQGFPQAEEGEEGKGGGKQSVENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLEDSSTSSILERDDLDDEDHQLGRDDRIPAEISLESRGISANYEGNLQSMDASQDHLFGASNVLGRDSHGTRTSTTHSAIGKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE | 497 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 10192029 | 10196151 | - | evm.model.ptg000013l.748 | HCH7g0748 | 548033 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g0748 | 497 | MobiDBLite | consensus disorder prediction | 160 | 192 | - | - | |
| HCH7g0748 | 497 | Pfam | Magnesium transporter MRS2-like | 199 | 293 | - | - | |
| HCH7g0748 | 497 | Pfam | Magnesium transporter MRS2-like | 375 | 420 | - | - | |
| HCH7g0748 | 497 | Pfam | Magnesium transporter MRS2-like | 50 | 137 | - | - | |
| HCH7g0748 | 497 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 32 | 495 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| HCH7g0748 | 497 | MobiDBLite | consensus disorder prediction | 300 | 315 | - | - | |
| HCH7g0748 | 497 | Gene3D | - | 33 | 116 | - | - | |
| HCH7g0748 | 497 | Gene3D | Magnesium transport protein CorA, transmembrane region | 122 | 425 | - | - | |
| HCH7g0748 | 497 | CDD | Mrs2_Mfm1p-like | 45 | 495 | IPR039204 | - | |
| HCH7g0748 | 497 | FunFam | Magnesium transporter MRS2-1 | 33 | 116 | - | - | |
| HCH7g0748 | 497 | MobiDBLite | consensus disorder prediction | 295 | 315 | - | - | |
| HCH7g0748 | 497 | Coils | Coil | 209 | 229 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH5g0064 | HCH-Chr5:389426 | HCH7g0748 | HCH-Chr7:10192029 | 1.50E-74 | dispersed | |
| HCH7g0748 | HCH-Chr7:10192029 | HCH6g1542 | HCH-Chr6:48822187 | 1.10E-79 | transposed |
Pathway information