Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0787 ATGTTGGAACCGGTTAGTTGCTGCCAAAGCTCTCAGATTTATGGTGTCGTTAAACAGAAGAATCCCATCAGGGCCTCCTCTCATACCATTCATCAACTTTGGGGATCTTCCTTCAATTTACAATATTCATACTTGAAGAAAGTTGCTTTTCCATCCTTCACGATAAATTGCAGGAGGAATGAACTTTTCCATAACGGTGCTACCACGTTCATGTCCATAGTATTTGGATGGAATGGACACTATTGGTCTAACCATAAGTCTGTACACAGGGAAAGATTAAAAATGCGTGCAGTTGATGTTGCAGCTGCTGTGGACGTGATCAATGATTTAGGATTGGATACATTGACATTCCTTGGTGTGACAGTCTTAGTTGTTCCTGTATTCAGACGCATTAAAGCTAGCCCTATACTCGGTTTCTTCTTTGCCGGAATTGTACTTAATCAGCTTGGTGTGATTAGAAATCTCACAGATGTTAAAGTTTTGTCTGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGTTTAGAGCTTTCATTTGCACGTCTCAAAGCTCTTGCAAAATTTGCCTTCGGCATGGGTTTAACTCAGGTTGTGTTATCGACTATTGCTTTCACTGCATTTGAACTTCCACCAAATGGGGCTATTGGCACAAGAATTTTGGAGTTCCTTTTTCATTCAAGACCTGACTTGGTTAACATCAGAAGCCTCGATGAAGCCATTGTGATTGGTGCTGCCCTCTCTTTATCATCTTCTGCTTTTGTTTTACAGCTTCTTGCAGAGAAAGGTGAGCTTGCAACAAGATTTGGCTCGGCAACTCTAGGGATACTTCTTTTACAGGATATTGCTGTTGTGCCTCTCCTGGTCATACTTCCAGTGCTTGAGAGCCAGAATTTGGGTGCGGAAAGTATCTGGCCAATGCTCGCACAAGAAAGTTTGAAAGCATTAGGTGGATTGGGTCTGCTCTCTCTCGGAGGGAAGTTAATTCTTAGGCGAGTTTTTGAGGTTGTTGCAGAAGCAAGAAGCTCAGAGGCTTTTGTAGCCCTTTGCCTGCTGACTGTTGCTGGCACTTCACTTCTCACCCAGAAGTTGGGTTTTAGTGATACGCTTGGAGCATTCCTGGCCGGGGCAATATTAGCAGAAACTAATTTCCGGACTCAGATTGAAGCAGATATTAGGCCATTTAGAGGCTTGCTCCTTGGATTATTTTTTGTTACCACAGGGACTTCCATTGACATGCAGCTCTTGTTCCGAGAATGGCCAAATGTCTTTGCACTTCTAGCGGGTTTAATTGTAATCAAGACCCTTATAATAACAGCAATAGGTCCCCGTGTGGGACTCACTACTCAAGAAAGTGTAAGAATAGGATTACTTCTATCTCAAGGAGGCGAGTTTGCGTTCGTAGTGTTTTCTTTAGCTAACAGGCTTGGAGTGCTACCTCTTGAATTAAACAAGCTGCTCATCATTGTTGTTGTCTTGTCAATGGCACTAACCCCATTGCTTAATGAAGCTGGACGAAAGGCTGCTGAGTTCATTAGTGAGAAGTATGAGACAGAGGATAAAGGTGAAGAGATGGTAAATTTCAACGTTACTGAACCAGTTGTTATTCTTGGATTTGGACAAATGGGTCAGGTCCTGGCGAATTTCTTATCTACACCTATGGTATCTGGGTCAGATGGCAAATCTCCTGGCTGGCCATATGTAGCTTTTGACATTGATCCTTCTGTTGTGAAGGGATCTAGAAAACTTGGTTTTCCTGTACTCTATGGAGATGGATCACGACCAGCAGTTTTGAATTCTGCTGGAATCTCTTCTCCAAAAGCTGTCATGGTTATGTACACAGGGAAGAAGAGAACAATTGAGGCTGTTCAGAGGCTTCGGCTTGCTTTCCCAGCTGTCCCAATTTATGCCAGAGCTAAAGACGTGATGCATCTAGTAGATTTAAAGAATGCAGGAGCTACAGACGCTATTCTTGAAGACGCAGAGACAAGTTTGCAACTTGGGTCAAAGCTTTTGAAAGGGCTTGGTGTCATGTCTGATGATGTGACTTTTCTAAGTCAGCTTGTTCTCGACACTATGGAAATACAAGCTCAAGATGCACTCAGCAAATCTGATGAGCGGGAGTCAGAAATTATGAAGCCTCTACAGGTAAGCGTTAACGATTTAATCGGGTCTAGATTATCCTCTTCTTCAACTTCCCCTGTGAACAACATGTCCAGGCTGAACCAGGAAATGGATGAAAGAGACCAAAAGACTGAGTTTCAGCAGCCTGAAGATTTAGATGGAAAGGGGATTCTATACTGTGAACTTGATACAGAGAGCAACTTTTTTTCAGCCACTGATGAGGTCTAA 2349 42.83 MLEPVSCCQSSQIYGVVKQKNPIRASSHTIHQLWGSSFNLQYSYLKKVAFPSFTINCRRNELFHNGATTFMSIVFGWNGHYWSNHKSVHRERLKMRAVDVAAAVDVINDLGLDTLTFLGVTVLVVPVFRRIKASPILGFFFAGIVLNQLGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAKFAFGMGLTQVVLSTIAFTAFELPPNGAIGTRILEFLFHSRPDLVNIRSLDEAIVIGAALSLSSSAFVLQLLAEKGELATRFGSATLGILLLQDIAVVPLLVILPVLESQNLGAESIWPMLAQESLKALGGLGLLSLGGKLILRRVFEVVAEARSSEAFVALCLLTVAGTSLLTQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVFALLAGLIVIKTLIITAIGPRVGLTTQESVRIGLLLSQGGEFAFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNEAGRKAAEFISEKYETEDKGEEMVNFNVTEPVVILGFGQMGQVLANFLSTPMVSGSDGKSPGWPYVAFDIDPSVVKGSRKLGFPVLYGDGSRPAVLNSAGISSPKAVMVMYTGKKRTIEAVQRLRLAFPAVPIYARAKDVMHLVDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDDVTFLSQLVLDTMEIQAQDALSKSDERESEIMKPLQVSVNDLIGSRLSSSSTSPVNNMSRLNQEMDERDQKTEFQQPEDLDGKGILYCELDTESNFFSATDEV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13375083 13403471 - evm.model.ptg000013l.787 HCH7g0787 548072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0787 782 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 61 739 - GO:0009507(PANTHER)|GO:0016020(PANTHER)
HCH7g0787 782 FunFam Glutathione-regulated potassium-efflux system protein KefB 530 702 - -
HCH7g0787 782 Gene3D - 109 509 IPR038770 -
HCH7g0787 782 Gene3D - 532 701 - -
HCH7g0787 782 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 532 670 IPR036291 -
HCH7g0787 782 Pfam Sodium/hydrogen exchanger family 120 501 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
HCH7g0787 782 FunFam K(+) efflux antiporter 3, chloroplastic 109 508 - -
HCH7g0787 782 Pfam TrkA-N domain 533 656 IPR003148 GO:0006813(InterPro)
HCH7g0787 782 ProSiteProfiles RCK N-terminal domain profile. 532 664 IPR003148 GO:0006813(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0787 HCH-Chr7:13375083 HCH7g1608 HCH-Chr7:48322025 6.40E-93 dispersed
HCH7g0787 HCH-Chr7:13375083 HCH4g0540 HCH-Chr4:3508392 7.70E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0787 K03455 - csv:101209266 1153.27