Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0823 ATGGGCAACGCAAGAACAAGATTTATCATCACCAACCGGAGAAAAATGACGAATTTCGCCTTACAAATTCTCCTCGGCCGATGGTTCGCCTTTTTCGCTTCTCTCCTAATCATGTCCGTTTCCGGCGCCACTTACATGTTCGGACTTTACTCCACAGACATCAAATCTTCCTTAGGTTACGACCAGACAACTCTTAACTTGCTCGGATTCTTTAAGGATCTGGGTGCCAACGTCGGAATCATGTCCGGTCTCATTAATGAGATTACCCCACCTTGGGTGGTTCTTTTCATCGGCGGTGTCATGAATTTCTTTGGGTATTTCATGATTTGGCTATCTGTTACGGATCGAATTGCGAAACCCAAAGTGTGGGCGATGTGTTTATTTATATGTCTAGGTGCCAATTCACAGACTTATGCTAATACAGGAGCTTTAATTCCTTGTGTAAAAAGTTACCCGGAAAATCGCGGTAATGTGTTGGGTTTGTTGAAGGGTTTTGTTGGTTTAAGTGGGGCAATTTTAACTCAGCTTTATCATGCTTTTTATGGAGATGATTCTAAGGATTTTATATTGTTGATTGCTTGGCTTCCCACTTGTATTTCTTTTTTCCTTCTTAGGATTGTTCGAGTTGTGAAAGATGAGCAAAGGTCCAAATCTAATGATCTTAAGATGTTCTATTATTTGCTTTATATTTCACTTGGTCTTGCTGGGTTCCTTATGGTTTTGATTATTATTCAAAATGAGATGACATTTAGTAGAATTCAGTACTTGGGGTGTGCTTTTATTCTCCTAGTGTTTCTTTTTCTTCCCATTGTTGTTGTTATTAGAGAAGAAATTGTGATTAGGAAGAGAAGACTGCTAGCTGTCGATTCGTCTTCTCAGGTTGCTGACCTGTCTCTGGCTGAATTATCGATTTCTGGACCATCAGGTTCAGCTGCCTCCTCTGAAGCTAATATAAGTTATGCAACTGGTTCTTGGTTTAAAAATGTGTTTAGGCCGCCAGAAAGAGGGGAGGACTACACCATATTGCAAGCACTTTTCAGCATAGATATGTTGATTCTGTTTGTTGCTACACTTTGTGGGGCTGGTGGGACTTTGACTGCCATGGATAACTTGGGTCAGATAGGTAGTTCCTTAGGGTATTCATCTCATAGCACTTCCACTTTCACATCTCTTGTGAGCATATGGGGATTCCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTGTGGACAAAGTACAACTTTTCACGCCCTCTATTTCTCACTCTTGTTCTTCTTCTCTCTTGTGTTGGTCATCTCCTAATTGCATTTGGAGTTCCAATTTCCCTCTACTTGGCTTCATTGATTATTGGATTCTGCTTTGGAGCTCTATGGCCATTGATTTTCGCGATTGTATCCGAAATATTTGGCCTGAAATACTATGCAACTTTGTACAGTGTAAGTGGAATGGCTAGCCCAGTTGGGTCATACATTTTCAATGTGAAAGTGGCTGGTTATTTATATGACAAAGAGGCTAGAAAGCAAATGGCAGGTTTAGGCCTTATAAGGAAAGCTGGGAAAGACTTGAGCTGCAAGGGAGTCCATTGCTATAAAATGGCTTTCATTATAATAACTGCTGCAACACTCTTTGGTACTTTTGTTTCATTCATTCTGGTGCTTAGGACTTGGGAATTCTATAAGGGTGATATCTATAAGAAATTCAAAGGGGAAACAAAACAAGAAGAATGA 1731 40.38 MGNARTRFIITNRRKMTNFALQILLGRWFAFFASLLIMSVSGATYMFGLYSTDIKSSLGYDQTTLNLLGFFKDLGANVGIMSGLINEITPPWVVLFIGGVMNFFGYFMIWLSVTDRIAKPKVWAMCLFICLGANSQTYANTGALIPCVKSYPENRGNVLGLLKGFVGLSGAILTQLYHAFYGDDSKDFILLIAWLPTCISFFLLRIVRVVKDEQRSKSNDLKMFYYLLYISLGLAGFLMVLIIIQNEMTFSRIQYLGCAFILLVFLFLPIVVVIREEIVIRKRRLLAVDSSSQVADLSLAELSISGPSGSAASSEANISYATGSWFKNVFRPPERGEDYTILQALFSIDMLILFVATLCGAGGTLTAMDNLGQIGSSLGYSSHSTSTFTSLVSIWGFLGRAFSGYASEFLWTKYNFSRPLFLTLVLLLSCVGHLLIAFGVPISLYLASLIIGFCFGALWPLIFAIVSEIFGLKYYATLYSVSGMASPVGSYIFNVKVAGYLYDKEARKQMAGLGLIRKAGKDLSCKGVHCYKMAFIIITAATLFGTFVSFILVLRTWEFYKGDIYKKFKGETKQEE 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16794824 16796554 - evm.model.ptg000013l.823 HCH7g0823 548108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0823 576 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 569 - GO:0016020(PANTHER)
HCH7g0823 576 Pfam Nodulin-like 27 274 IPR010658 -
HCH7g0823 576 CDD MFS_Mch1p_like 26 546 - -
HCH7g0823 576 Gene3D MFS general substrate transporter like domains 346 559 IPR036259 -
HCH7g0823 576 SUPERFAMILY MFS general substrate transporter 27 558 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0306 HCH-Chr11:2818339 HCH7g0823 HCH-Chr7:16794824 1.80E-209 dispersed
HCH1g0699 HCH-Chr1:55838358 HCH7g0823 HCH-Chr7:16794824 7.60E-195 dispersed
HCH1g0700 HCH-Chr1:55855781 HCH7g0823 HCH-Chr7:16794824 9.70E-190 dispersed
HCH3g1199 HCH-Chr3:43589131 HCH7g0823 HCH-Chr7:16794824 5.30E-177 dispersed
HCH3g1200 HCH-Chr3:43674213 HCH7g0823 HCH-Chr7:16794824 2.30E-172 dispersed
HCH7g0823 HCH-Chr7:16794824 HCH8g1332 HCH-Chr8:48265645 7.00E-89 dispersed
HCH7g0823 HCH-Chr7:16794824 HCH7g0824 HCH-Chr7:16840525 3.30E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0823 - - - 0.0