Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0824 ATGGCTGTAACGACGACGAAGATAACGGAATCTAGCTGCAGCTACCGTTGGAGCCAGACCAAGACATTAGGGCTTGAACTATGGACCAGCAAATGGCTCATGGTTTTTGCTTCAATCACAATCATGTCCGCCAATGGCTCAGGCTACATGTTCGGCCTTTACTCAAACGAAATCAAATCAAAATTCGGTTACGATCAAACAACGTTGAATCTTCTAAGTTTCTTCAAAGACTTGGGAGGAAATTTGGGAGTAATATCCGGTCTCGTGTACGAGGTTAGTCCTCCATGGCTGGTTCTTTTGATCGGAGCAGCCATGAATTTCTTAGGATTCTTCATGGTTTGGGTGTCGGTAACAGATCGGATCGCCAAACCCGAATTGTGGCAAATGTGTGTTTATATATTTATTGGTGCTAATTCGTTATCGTTTCCTAATACTGCTGCTTTGGTTACTTGTGTTAAGAATTTCCCTCATAATCGAGGCTGTGTTTTGGGACTTTTGAAAGGGTATATAGGTCTAAGTGGAGCCATAATGACACAACTTTACCATGCCATTTATGGAGATGATTCAAAGGCTCTTATTCTGCTGATTGCTTGGCTCCCGGCTGCAGTTTCTTTGGCTTCCCTTCCTCTAATCCGAATCATAAATGCCACTACCACTCCACAAGCAAATGAGCTCAAAGTTTTCTACAATTTTCTTTACGTATCTCTTGGTCTTGCTGGCTCTCTCATGGCCATAATCATTGCTCAAAGCAGACATCAATTCACTAAAACTGAGTACATAGCAACTGCTTCTACAGTGATTCTCTTTCTTATTCTCCCTCTTGTTATTGCTGTAAACAAACAACTCAAGCTTTTCAAACAACCTAAACAAGAAAACACCGCCATCGACATCACCAACGCCAACATGGAACCGCAGCCTACTGTGAAGCAAAGAACTTGGTTTAGAAACATCTTCAAGCCACCCCAGCGGGGAGAAGACTACAACATATTGCAAGCAGTTTTCAGCATCGACATGGTGGTATTATTTATTGCAACAACTTGCGGTGTCGGAGGAGGTTTGGCCGTTGTCGACAATTTAGGTCAGATTGGAACCTCGTTAAACTATCCAACTCGAAGCATTTCGATCTTTGTATCGTTGATGAGCATATGGAACTTCCTTGGACGAGTTGTTTCGGGCTACGTATCTGAACTTTTACTAATCAACTATAAATTTCCCCGTCCTCTGATGCTCACTTTTGTGATTCTTCTCTCTTGCCTCGGCCATCTGTTGGTCGCATTCGCAGTCCCAAACGCTCTCTACCTAGCTTCGATGATAATTGGGTTTTGTTTGGGAGCACAGATACCATTGACAGCAACAATCATATCTGAAATATTTGGCCTAAAGCACTACTCAACTTTATACAATGTAGGGTCTGTTTCAAGCCCCATTGGGTCTTATATTTTCAATGTGAGAATTGCTGGTCATTTGTATGACAAAGAGGGAGAAAGGCAAATCAAGAATTTGGGACTTACAAGGCAGTCTGGGCAGGAGTTGATTTGCAAAGGAGCAACTTGTTACAAAATATCTTTTTTAGTAATGGGAGCTGCTGCCATTTTCGGGTGTCTAGTTTCACTCATCTTGGTGTTTAGGACAAGAAGTTTTTACAAAGGTGACATCTATCAGAGGTTTCGAGAGGAGAGAAAAGAAGAAGAAATTCAGCAAACCCTTGCCTAG 1713 42.21 MAVTTTKITESSCSYRWSQTKTLGLELWTSKWLMVFASITIMSANGSGYMFGLYSNEIKSKFGYDQTTLNLLSFFKDLGGNLGVISGLVYEVSPPWLVLLIGAAMNFLGFFMVWVSVTDRIAKPELWQMCVYIFIGANSLSFPNTAALVTCVKNFPHNRGCVLGLLKGYIGLSGAIMTQLYHAIYGDDSKALILLIAWLPAAVSLASLPLIRIINATTTPQANELKVFYNFLYVSLGLAGSLMAIIIAQSRHQFTKTEYIATASTVILFLILPLVIAVNKQLKLFKQPKQENTAIDITNANMEPQPTVKQRTWFRNIFKPPQRGEDYNILQAVFSIDMVVLFIATTCGVGGGLAVVDNLGQIGTSLNYPTRSISIFVSLMSIWNFLGRVVSGYVSELLLINYKFPRPLMLTFVILLSCLGHLLVAFAVPNALYLASMIIGFCLGAQIPLTATIISEIFGLKHYSTLYNVGSVSSPIGSYIFNVRIAGHLYDKEGERQIKNLGLTRQSGQELICKGATCYKISFLVMGAAAIFGCLVSLILVFRTRSFYKGDIYQRFREERKEEEIQQTLA 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16840525 16843243 + evm.model.ptg000013l.824 HCH7g0824 548109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0824 570 Gene3D MFS general substrate transporter like domains 330 548 IPR036259 -
HCH7g0824 570 Pfam Major Facilitator Superfamily 361 546 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
HCH7g0824 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 557 - GO:0016020(PANTHER)
HCH7g0824 570 SUPERFAMILY MFS general substrate transporter 32 551 IPR036259 -
HCH7g0824 570 Pfam Nodulin-like 31 277 IPR010658 -
HCH7g0824 570 CDD MFS_Mch1p_like 30 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0478 HCH-Chr7:3626169 HCH7g0824 HCH-Chr7:16840525 6.90E-83 dispersed
HCH7g0824 HCH-Chr7:16840525 HCH8g1332 HCH-Chr8:48265645 8.80E-92 dispersed
HCH7g0823 HCH-Chr7:16794824 HCH7g0824 HCH-Chr7:16840525 3.30E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0824 - - - 0.0