Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g0915 ATGGGGTTCTTGTTGATGGACTTTATATTTGGTAGGTTCTTGAAGATCCATATTTGGAAAGCCGGAATCTTTGTGGAATTGGTTGTTTTTGCAGACATGTTTTTGTTGGTGTCAGGTTTAGGTTCCATGTCTTCTGTTGCTGTTTCTTATGGTGAGAAAGGTTCTGTTTTCTGTGGTTTAAAGATAGATGGGTCTCATCTTGTGAGCTGTTTTGGTTCAAATTCAGCTATAACTTATGGAACCCCATCTCATTTCCCAGTTATCGGTCTCACTGGTGGTGATGGGTTTGTTTGTGGGCTTCTTTTGGATTCGAACCAACCGTATTGTTGGGGAAGCAGTGGCTATATTCAAATGGGTGTTCCACAGCCCATGAGTAAAGGAGCTCAATACTTGGAAATCAGTGCTGGTGATTACCATCTGTGTGGACTCCGAACACCATTGACGGGGAGGCGCAGAAACACTTCTTTTATTGATTGTTGGGGTTATAACATGACTAAAACCTTTGCTTTTGATGGGCAGATTGAATCAATCTCCGCAGGTTCGGAATTCAACTGTGGTCTATTTTCGCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACTAGCAGCCGGGTAATCAGTCTGATACCTAAAGATATGAGGTTTCAAAAAATTGCCTCTGGTGGAAATCATGTTTGTGGAATTTCGGAGGGTGTAAATTCCAGAGCCTTTTGTTGGGGAAGGAGCTTAGACATTGAAGAAGAAATCTCGGTTGCATATTCAGGTGAAGGAAATGTAGATTTGGTTCCAGATGATCCATTATACTCTGTTGTTGGGGGGAAATTTCATGCTTGTGGAATCAAGAGCTCGGATCGGGGTATAGTTTGTTGGGGTTTTACTGTCAAACCAAGCACTCCAGCACCTAATGGAATCAAAGTTTATGATATTGCTGCTGGAGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTTTGCTGGGGTCTTGGATTTCCTACTTCTCTACCTTTAGCTGTCTCACCTGGAAACTGTAAGTCAACTCCTTGTGCTCCTGGTTTTTACGAAATCAGCCAAGACAACACTCGATGCAAAAATCCGAGCTTTCATGTGTGTATGCCCTGCAGTACTACTTGCCCCCCAGAGATGTACCAAAAATTTGAGTGCACCTTAAAATCTGATACACAATGTGTATTTAACTGTTCGAGTTGCTTTTCTTCTGCATGCTTCTCTAATTGTTCATCCACGTATGCAAATGGTATGATGGGGAAGAAAAATGAGAAGTTCTGGTCAATGCAGCTGCCGGTTCTTATAGCTGAGATTGCTTTCGCTGCGTTTTTGGTAGCTATTGTCTCTTTGACTGCAATCTTATATGTTCGATACAAGTTGCGGAACTGCCAGTGCTCAGGAAAGGAGTTGATGTCCAAGAAAAATAAAGGAACTGCTTCCTCCTTTCAGAAGGAAAATTGTAAGATACGTCCCGACTTAGATGAGTTGAAAATAAGGAGGGCGCAGATGTTCACCTATGAAGAACTCGAAAGAGCTACTTGTGGGTTTAAGGAAGAGTCCCTTGTGGGAAAGGGAAGTTTCTCCTGTGTTTTTAGAGGTGTTTTAAAGGATGGGACAGTCGTAGCAGTGAAAAGGGCTATAATGTCACCCAACATGCAGAAGAATTCAAAAGAGTTTCACACTGAACTTGACTTGTTGTCAAGATTAAATCATGCCCATTTGCTTAACCTTCTCGGTTATTGTGAAGAAGGCGGGGAGAGGCTTCTAGTTTATGAATTCATGGCTCATGGTTCCTTGCATCAGCATCTCCATGGAAGGAATACGGTCTTAAAAGAGCAATTAGATTGGATAAGAAGGGTCACAATTGCAGTCCAAGCCGCAAGGGGAATCGAATACTTACATGGCTATGCTTGTCCTCCAGTCATTCATCGAGACATCAAGTCATCAAACATCCTAATAGATGAAGAGCACAATGCTCGAGTGGCTGATTTCGGTTTATCGTTATTGGGACCAACAGATAGCAGCTCTCCATTAGCTGAGCTACCAGCTGGTACTCTCGGGTATCTTGATCCAGAGTACTATAGACTCCATTATCTTACTACCAAATCTGATGTCTATAGCTTTGGTGTCTTGCTGCTAGAAATTCTGAGTGGTAGGAAAGCCATTGATATGCAATATGAAGAAGGGAATATAGTAGAATGGGCAGTGCCGCTGATCAAATCTGGAGATATTTCTGCAATTTTAGATCCAGTGTTAAAATTGCCCTCTGATATCGAGGCCCTTAAAAGGATTGCGAATGTAGCCGGCAAATGTGTAAGAATGAGAGGAAAGGAGAGACCGTCGATGGATAAAGTGACAACGGCATTGGAGCGTGCACTTGCCCAGTTAATGGGTAGCCCATGTAATGAACAACCAATTTTACCAACTGAGGTGGTCTTGGGAAGCAGTAGATTGCACAAAAAATCATCTCAAAGATCATCGAACCGATCGGTCTCTGAAACGGATATAGCAGAAGCGGAGGATCAAAGGTTCGAGTTCAGAGCTCCATCATGGATTACATTTCCCAGTGTTACCTCTTCCCAGAGGAGAAAATCGTCGGTCTCAGAAGCAGATGTTGATGGAAAGAACTTGGAACCAAGAAATATAGGCAATTGTGGAGGTGTTGGAGATGGATTGAAGAGTTTAGAGGAAGAGATTGGACCTGCTTCCCCTCGAGAAAAGTTGTTCTTGGAGCACAATTTCTAA 2760 42.64 MGFLLMDFIFGRFLKIHIWKAGIFVELVVFADMFLLVSGLGSMSSVAVSYGEKGSVFCGLKIDGSHLVSCFGSNSAITYGTPSHFPVIGLTGGDGFVCGLLLDSNQPYCWGSSGYIQMGVPQPMSKGAQYLEISAGDYHLCGLRTPLTGRRRNTSFIDCWGYNMTKTFAFDGQIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPKDMRFQKIASGGNHVCGISEGVNSRAFCWGRSLDIEEEISVAYSGEGNVDLVPDDPLYSVVGGKFHACGIKSSDRGIVCWGFTVKPSTPAPNGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGNCKSTPCAPGFYEISQDNTRCKNPSFHVCMPCSTTCPPEMYQKFECTLKSDTQCVFNCSSCFSSACFSNCSSTYANGMMGKKNEKFWSMQLPVLIAEIAFAAFLVAIVSLTAILYVRYKLRNCQCSGKELMSKKNKGTASSFQKENCKIRPDLDELKIRRAQMFTYEELERATCGFKEESLVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGRNTVLKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDISAILDPVLKLPSDIEALKRIANVAGKCVRMRGKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNRSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEPRNIGNCGGVGDGLKSLEEEIGPASPREKLFLEHNF 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35769243 35772002 - evm.model.ptg000013l.915 HCH7g0915 548200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g0915 919 SUPERFAMILY Protein kinase-like (PK-like) 503 794 IPR011009 -
HCH7g0915 919 MobiDBLite consensus disorder prediction 862 896 - -
HCH7g0915 919 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 351 399 IPR001368 GO:0005515(InterPro)
HCH7g0915 919 SMART serkin_6 521 798 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0915 919 Gene3D Transferase(Phosphotransferase) domain 1 599 806 - -
HCH7g0915 919 FunFam Receptor protein kinase CRINKLY4 599 801 - -
HCH7g0915 919 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
HCH7g0915 919 MobiDBLite consensus disorder prediction 822 838 - -
HCH7g0915 919 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH7g0915 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH7g0915 919 Gene3D - 162 353 IPR009091 -
HCH7g0915 919 MobiDBLite consensus disorder prediction 822 841 - -
HCH7g0915 919 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524(InterPro)
HCH7g0915 919 Gene3D - 31 161 IPR009091 -
HCH7g0915 919 Gene3D Phosphorylase Kinase; domain 1 493 598 - -
HCH7g0915 919 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 35 843 - -
HCH7g0915 919 SUPERFAMILY RCC1/BLIP-II 41 292 IPR009091 -
HCH7g0915 919 FunFam Serine/threonine-protein kinase-like protein CR4 39 206 - -
HCH7g0915 919 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0366 HCH-Chr1:50860813 HCH7g0915 HCH-Chr7:35769243 8.40E-72 dispersed
HCH4g0255 HCH-Chr4:1577118 HCH7g0915 HCH-Chr7:35769243 1.50E-58 dispersed
HCH6g0379 HCH-Chr6:6521059 HCH7g0915 HCH-Chr7:35769243 1.10E-66 dispersed
HCH7g0915 HCH-Chr7:35769243 HCH7g0117 HCH-Chr7:761567 2.50E-64 dispersed
HCH7g0915 HCH-Chr7:35769243 HCH9g0594 HCH-Chr9:3996829 3.60E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81644 PF07714 PK_Tyr_Ser-Thr 1.30E-43 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g0915 - - - 0.0