Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1047 ATGGCTTTTATGAACTTGAAAAACATGATCTTCTTCAATTTAATAATCTTTTCAACACTTTCATCGATACCCTTTTCGATTTCCCAGCAACCAGAAGCTCCACCACCTGCTGCTGATTCCTGCAATGGAATCTTCTTGTCTTACACTTTCACAGATGGCAAAATTCTCCCACCCAATCATCTCAAGTCAGATCCTTCCCTTCAAGCTTACAGATTTGAATCTCTTCTTTCAGTTCTCAATAATGGGGATAAGGAACTTAAATCTTGGAGGGTTTTTGTGGGGTTTCAACATGATGAGATTTTGGTTTCTGCTTCTGGTGCTGTTCTTGCTGATGGTAATACCATTCCTGGAAATGTTGGTAATGGGACTCTTTTTGCTGGGTTTCCGATGACCGATCTTAAGACTGCCATTGAAACTGCCGGGGATTTGACTCAGATGCAGGCTCAGGTTTTATTAGTTGGGACTCAGTTTGGTGTCGTGCCGCCCGATGTTCCGATGCCGGCGAATATCTCTCTCGCTAATGATGGATTTCTTTGTCCCAGACCGAGTTTGCTAGGGAAGAGGGAGATGCATGTATGTTGTACACCCGATTCACGTGTTAAATCGAATATCACAACTAGTGAAGAGTTTTTGCCTAGACAGAATGGTGATCTAACTATCATGTATGATGTAACAAAAACATATGATTCAAGTTACTGGGCTCTAGTCACAATAGCTAACCATAATCCCCTTGGTCGTCTTGATAATTGGAGATTGGGCTGGGAGTGGATGAGGGATGAATTTATCTATTCTATGAAAGGGGCGTATCCTTCTGTTGTTGATCATACTGATTGCATATTTGGTCGTCAAGGCACTTTTTATCAGAGTCTAGACTTTGCCAATGTGTTAAATTGTGAAAGAAGACCGACGATTATTGACTTGCCTCTAACTAAGGCTAATGACACTGCTCTGGGTTTGATACCTTTCTGCTGTCGAAATGGTACTATCTTGCCTCCTCATATGGACCCGAGCAAGTCGGTGTCTGCATTTCAGATGCAAGTCTTTAAAATGCCACCAGATCTCAACAGATCCCAACTTACACCACCTCAGAATTGGAGGATCAATGGCACCCTCAACCCCACATATAAATGTGGTCCTCCCATGAGGGTAAGCCCCAGCCAGTTCCCTGACCCAAGTGGTTTACCCTCAAATTCCACTGCAGTGGCTAGTTGGCAGGTTGTTTGTAATATAACACAGGTCAAGGGTGACAGCCCTAAATGTTGCGTTTCGTTTTCTGCTTACTACAATGATTCTGTCATCCCATGCCGAACAAGCGCTTGTGGATTGGCACAAAATACTGGCCGTACATGCAATGCAACCTCCCCTGCAATGCTCCTTCCACCTGAAGCACTTCTTGTTCCTTTTGAGAATAGAACTGCCATGGCTGTTGCTTGGGCTGGTCTTAAACATCTCCCAGTTCCAAACCCTATGCCCTGTGCTGATAACTGTGGTGTCAGTATCAATTGGCATTTATATACGGATTATAGTAATGGGTGGAGTGCAAGGATCACTCTCTTCAACTGGGACGAAATAAATTTCGCAGATTGGTTTACTGCAGTTGAGATGAAGAAAGCAGCACCCGGTTTCCAGGCAATGTACTCGTTCAACGGAACTTCCTTGGAACTGGATGGTGCCAATAATACTATCTTTATGCAGGGTTTGCCTGGACTGAACTATCTTGTGGCAGAGGCTGATGGAGCTAACCCAGAGAAGGATCCTAGGGTACCTGGAAAACAGCAATCTGTGATCTCATTTACAAAGAAGGATTTACCAGGTCTCAATGTGGTTGCTGGAGATGGGTTCCCCACAAAAGTGTTCTTCAATGGGGAGGAGTGCTTGCTTCCTAAAATATTTCCAGCGAATGACGGCCAAAGGGTTATAGCGACGTTTTTCCCGGCCCTCCTAATGCTACTTGTGTTCATACTTATTCAGCAATAG 1977 44.11 MAFMNLKNMIFFNLIIFSTLSSIPFSISQQPEAPPPAADSCNGIFLSYTFTDGKILPPNHLKSDPSLQAYRFESLLSVLNNGDKELKSWRVFVGFQHDEILVSASGAVLADGNTIPGNVGNGTLFAGFPMTDLKTAIETAGDLTQMQAQVLLVGTQFGVVPPDVPMPANISLANDGFLCPRPSLLGKREMHVCCTPDSRVKSNITTSEEFLPRQNGDLTIMYDVTKTYDSSYWALVTIANHNPLGRLDNWRLGWEWMRDEFIYSMKGAYPSVVDHTDCIFGRQGTFYQSLDFANVLNCERRPTIIDLPLTKANDTALGLIPFCCRNGTILPPHMDPSKSVSAFQMQVFKMPPDLNRSQLTPPQNWRINGTLNPTYKCGPPMRVSPSQFPDPSGLPSNSTAVASWQVVCNITQVKGDSPKCCVSFSAYYNDSVIPCRTSACGLAQNTGRTCNATSPAMLLPPEALLVPFENRTAMAVAWAGLKHLPVPNPMPCADNCGVSINWHLYTDYSNGWSARITLFNWDEINFADWFTAVEMKKAAPGFQAMYSFNGTSLELDGANNTIFMQGLPGLNYLVAEADGANPEKDPRVPGKQQSVISFTKKDLPGLNVVAGDGFPTKVFFNGEECLLPKIFPANDGQRVIATFFPALLMLLVFILIQQ 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42430939 42433611 + evm.model.ptg000013l.1047 HCH7g1047 548332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1047 658 Pfam COBRA-like protein 232 411 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
HCH7g1047 658 PANTHER COBRA-LIKE PROTEIN 7 6 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g1161 HCH-Chr12:9696256 HCH7g1047 HCH-Chr7:42430939 9.90E-220 dispersed
HCH7g1047 HCH-Chr7:42430939 HCH9g0320 HCH-Chr9:2011021 3.80E-38 dispersed
HCH7g1047 HCH-Chr7:42430939 HCH6g0773 HCH-Chr6:42505597 1.10E-228 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1047 - - - 0.0