Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1329 ATGGCTCAACAACTAGAAGTGCTGACTGCACTTGATGTTGCCAAGACCCAATTGTACCATTTCACGGCCATCGTCATCGCCGGAATGGGATTCTTCACCGATGCATACGATCTTTTCTGCATCGCCGTCGTCTCGAGGTTGCTCGGACGTATATACTACTACACACCGGGCTCGAAAAAGCCCGGCTCGCTCCCTCCGAACGTCTCCGCTGCAGTAAGCGGTGTAGCCCTTTGCGGTACACTAGCCGGACAGCTCTTCTTCGGGTGGCTCGGCGACAAGTTGGGGAGGAAGAAAGTATATGGGGTAACACTTGTTCTCATGGTGCTTTGTTCTATTGCTTCAGGACTTAGTTTTGGACATTCGGCAAAAGCAACCATGACTACTCTCTGTCTCTTTCGATTCTGGCTCGGTTTCGGTATCGGCGGCGATTACCCTCTCTCTGCCACCATCATGTCGGAATATGCAAACAAGAAAACTCGCGGTGCCTTCATTGCTGCTGTCTTTGCCATGCAAGGGTTTGGGATATTGGCTGGTGGGATCGTTGCTTTGATTGTTTCAGCTGGATTCAAAAACAGCTTCCCAGCTCCACCATACGCCGTCGATCAAATCGCCTCCACCGTACCAGAAGCTGATTATGTATGGCGAGTAGTTCTCATGTTCGGCGCATTCCCCGCCGGCCTCACATACTACTGGCGTATGAAAATGCCTGAAACAGCTCGTTACACCGCTCTCGTCGCGAAAAACGCAAAACAAGCCGCCGCCGATATGTCCAGAGTTCTCCAAGTAGATTTCGAAGCCGAACAAGACAAACTAGAAACCATCATTTCCCAACCAAAAAACAGCTTCGGTCTCTTTTCCAAACAATTCGCAAAACGACACGGCCTCCACTTGGTCGGAACAACCACCACTTGGTTTTTACTCGACATCGCATTTTACAGCCAAAACCTTTTCCAAAAAGACATCTTCACCGGAATCGGCTGGCTCCCACCGGCGGCCACCATGAACGCTATCGAGGAGTGTTATAGGGTTGCTAAAGCTCAAACTTTGATAGCGTTATGTGGGACCGTTCCCGGGTATTGGTTTACGGTGGCGTTAATTGATATTGTTGGGAGATTCAAGATTCAAATAATGGGGTTCATTATGATGACGATTTTTATGTTTTCGATTGCCTTTCCTTATGACCATTGGATTTTGAAGGAAAATCGAGTTGGGTTTCTTGTTATGTATTCTCTTACGTTCTTTTTCGCTAATTTTGGGCCGAATTCTACCACGTTTATTGTTCCGGCGGAGATATTTCCTGCCCGGTTGAGATCCACGTGTCATGGAATTTCAGCTGCTGCCGGAAAAGCTGGAGCCATTGTTGGTGCTTTCGGGTTCTTATATGCGGCTCAGAATCAGGATCCGACGAAAACGGATCCGGGTTACCCGGCTGGAATTGGGATAAAGAATTCGTTGATTGCTCTTGGGTGTATTAATTTTGCTGGTGCGGTGTGTACTTTGTTGGTGCCGGAGCCAAAAGGGAAGTCGTTGGAGGAGTTGACCGGAGAGAATGAGGAGGTTGAAGATGCACCGCCGGCGACTAGGACAGTGCCGGTGTGA 1599 48.97 MAQQLEVLTALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCIAVVSRLLGRIYYYTPGSKKPGSLPPNVSAAVSGVALCGTLAGQLFFGWLGDKLGRKKVYGVTLVLMVLCSIASGLSFGHSAKATMTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAGFKNSFPAPPYAVDQIASTVPEADYVWRVVLMFGAFPAGLTYYWRMKMPETARYTALVAKNAKQAAADMSRVLQVDFEAEQDKLETIISQPKNSFGLFSKQFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFTGIGWLPPAATMNAIEECYRVAKAQTLIALCGTVPGYWFTVALIDIVGRFKIQIMGFIMMTIFMFSIAFPYDHWILKENRVGFLVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQNQDPTKTDPGYPAGIGIKNSLIALGCINFAGAVCTLLVPEPKGKSLEELTGENEEVEDAPPATRTVPV 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 46194749 46197289 + evm.model.ptg000013l.1329 HCH7g1329 548614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1329 532 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 512 - -
HCH7g1329 532 MobiDBLite consensus disorder prediction 512 532 - -
HCH7g1329 532 SUPERFAMILY MFS general substrate transporter 12 513 IPR036259 -
HCH7g1329 532 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
HCH7g1329 532 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH7g1329 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857(InterPro)
HCH7g1329 532 FunFam Inorganic phosphate transporter 1-6 19 526 - -
HCH7g1329 532 CDD MFS_PhT 24 506 - -
HCH7g1329 532 Gene3D MFS general substrate transporter like domains 19 530 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g1329 HCH-Chr7:46194749 HCH7g1330 HCH-Chr7:46208463 5.60E-234 tandem
HCH5g0092 HCH-Chr5:576271 HCH7g1329 HCH-Chr7:46194749 2.20E-238 wgd
HCH6g1501 HCH-Chr6:48563235 HCH7g1329 HCH-Chr7:46194749 7.90E-257 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1329 K08176 - csv:101213007 906.36