Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1330 ATGGCAGGAGAGCAATTGAAAGTGCTTAATGCATTAGATGTTGCTAAAACACAATGGTATCATTTCACAGCAATTGTGATCGCTGGAATGGGCTTTTTCACTGATGCATATGATCTCTTCTGCGTTTCTCTTGTAACCAAACTGCTTGGCCGCATATACTACTACGAGGAAGGCTCACGCACGCCTGGTGCGTTGCCCTCAAACGTCGCAGCTGCCGTTAACGGTGTCGCCTTTTGCGGAACCCTCTCGGGCCAGCTCTTCTTCGGTTGGCTCGGTGACAAGATGGGACGTAAACGTGTCTATGGAATGACACTCATGATTATGGTCATTTGTTCAGTAGCTTCAGGCCTTTCTTTTGGGAACAAGCCTACGGCTGTCATGACTACTCTTTGCTTCTTTCGGTTCTGGTTAGGATTCGGTATCGGTGGCGATTATCCGCTTTCAGCCACCATTATGTCAGAGTATGCTAATAAGAAAACTCGGGGTGCATTCATCGCTGCCGTGTTCGCAATGCAGGGGTTTGGGATATTAGCCGGTGGGATGGTGGCGGTAATCGTCTCAGCCACTTTCAAGGCTAAATATCCAGCTCCTGCCTATGAGGTTGATCCTGCAGCCTCTACTGTCCCAGAAGCTGATTATGTTTGGAGGATAATTGTGATATTTGGTGCCATTCCTGCATTGCTCACTTATTACTGGCGTATGAAAATGCCTGAAACTGCACGTTACACCGCCTTGGTAGCGAAGAATGCGAAACAGGCAGCGGCGGATATGTCGAAAGTGTTGCAGGTCGATTTAGAAGCCGAGCAGGAGAAGATAGAAGAGAGGAAAAATTCAAAGAATGAATTTGGTTTGTTCTCAAAGAGATTTCTTCTGCGTCATGGGCTTCACTTAGTTGGCACCACTACCACTTGGTTCTTGTTAGACATTGCTTTTTACAGCCAAAACCTATTCCAAAAAGACATTTTCACAGCCATTGGCTGGCTCCCTCCAGCCAAAACCATGAATGCCCTTGAAGAAGTTTACAGAATTGCTAGAGCTCAAACACTCATTGCCTTATGCAGCACAGTTCCTGGTTACTGGTTTACTGTGGCATTGATTGATGTCATTGGAAGATTTGCCATTCAACTGATGGGGTTCTTCTTCATGACAGTTTTCATGTTTGCTTTAGCCATTCCTTACAAACACTGGACTCTAGAAGCCAACAGAATAGGATTTGTTGTGATATATTCACTCACATTCTTCTTCGCAAATTTCGGTCCAAATTCAACCACATTCGTGGTACCGGCCGAGATATTCCCAGCTCGGCTACGGTCGACATGCCACGGGATATCAGCTGCAGCTGGGAAAGCAGGAGCCATAGTTGGGGCATTTGGATTTCAGTATGCTGAAAAAGCAGTTGGAGTGAAAAAGACACTGATAATGCTTGGGGTAGTTAATGGACTTGGAATGTTGTTTACTCTATTGGTTCCTGAATCAAAGGGAAAATCTTTGGAAGAAATGTCTGGTGAAGCTGAGGAAGAGATTGAAAATGAAAGCTCATTGGAATCAAAGCCACAATCTGGTAATGAATATAGAACTATGCCAGTTTAA 1590 45.03 MAGEQLKVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYYEEGSRTPGALPSNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMIMVICSVASGLSFGNKPTAVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAVIVSATFKAKYPAPAYEVDPAASTVPEADYVWRIIVIFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVDLEAEQEKIEERKNSKNEFGLFSKRFLLRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVALIDVIGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVIYSLTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFQYAEKAVGVKKTLIMLGVVNGLGMLFTLLVPESKGKSLEEMSGEAEEEIENESSLESKPQSGNEYRTMPV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 46208463 46210052 + evm.model.ptg000013l.1330 HCH7g1330 548615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1330 529 FunFam Inorganic phosphate transporter 1-6 20 515 - -
HCH7g1330 529 MobiDBLite consensus disorder prediction 514 529 - -
HCH7g1330 529 Gene3D MFS general substrate transporter like domains 20 517 IPR036259 -
HCH7g1330 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857(InterPro)
HCH7g1330 529 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
HCH7g1330 529 CDD MFS_PhT 25 493 - -
HCH7g1330 529 MobiDBLite consensus disorder prediction 496 529 - -
HCH7g1330 529 Pfam Sugar (and other) transporter 26 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH7g1330 529 Coils Coil 497 517 - -
HCH7g1330 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 499 - -
HCH7g1330 529 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1286 HCH-Chr11:44911437 HCH7g1330 HCH-Chr7:46208463 7.20E-189 dispersed
HCH5g0092 HCH-Chr5:576271 HCH7g1330 HCH-Chr7:46208463 8.30E-238 dispersed
HCH5g0093 HCH-Chr5:579772 HCH7g1330 HCH-Chr7:46208463 5.30E-240 dispersed
HCH6g1501 HCH-Chr6:48563235 HCH7g1330 HCH-Chr7:46208463 2.70E-236 dispersed
HCH7g1330 HCH-Chr7:46208463 HCH8g0753 HCH-Chr8:44153907 5.60E-08 dispersed
HCH7g1329 HCH-Chr7:46194749 HCH7g1330 HCH-Chr7:46208463 5.60E-234 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1330 K08176 - csv:101209582 891.338