Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g1382 | ATGGCTGGTCAAGCAAGTCTAGTGGTTGGATCTCATGTTTGGATCGAGGATCCTGAGGTAGCTTGGATAGATGGGGAAGTAGTGGAAGTTAATGGTGAAGATATCACAGTAAACTGTACATCAGGGAAGACCGTCGAGGTTAAATTGTCAAATGTCAATCCGAAGGATCCCGAATTTCCTCCATGTGGTGTAGATGATATGACAAGACTAGCTTATCTGCATGAGCCAGGGCTTCTACAAAACTTAAAATGTCGTTATGACATTAATGAAATTTATACCTATACTGGAAGTATACTAATAGCTGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATCACATGATGCAACAATATAAAGGTGCAGCGCTAGGGGAGCTGAGCCCACATCCTTTTGCCATTGCGAATTCTGCTTATAGGCTCATGATCAATGAGGGTATCAGTCAGGCAATTTTGGTTAGTGGGGAAAGCGGAGCTGGTAAAACAGAGAGTACTAAGATGCTTATGCACTATCTTGCCTATGTTGGAGGGCGTGTTGGAGTAAAGGCTGCGGCCGGGGGACGGTCTGTTGAGCAGCAAGTCCTAGAGTCCAACCCTGTTCTTGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAACTCAAGCCGGTTTGGTAAATTTGTGGAGATCCAGTTTGACCAGAACGGGAGAATCTCAGGCGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTGTGCGCTGCACCAACAGAGGATATTGAAAAGTATAAACTAGGGAAGCCAACAACATTTCATTATCTCAATCAATCTAATTGCTACGAACTTGATGGAGTGGATGATTCCAAGGAGTATCATTCTACAAGGAAAGCTATGGGTGTTGTTGGAATAAGTACTAGTGAGCAGGATGCAATATTTCGAGTTGTGGCTGCGATACTTCATCTGGGAAATGTTGAGTTTGCAAAGGGGGAGGATGCAGATTCTTCTGAACCTAAGGATGACAAATCTCGGTTCCACCTCAAAATGGCAGCAAAATTATTCATGTGTGATGAGAAGTCTCTTGAAGATTCCATGTGTAGTCGCGTGATAGTGACACGTGATGAAACCATAACAAAATGTCTTGATCCAGAATCTGCAACCGTTAGTCGGGATGCTTTAGCCAAGATAGTTTATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCCTGATTCAAAGAACTTAATTGGGGTTCTGGATATCTATGGGTTTGAAAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTTTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGATTGGAGTTATATTGAATTTATTGATAATCAGGATATTCTTGATCTCATTGAGAAGAAACCTGGTGGTGTCATTGCTCTTCTGGATGAGGCTTGCATGTTTCCAAGATCCACACATGAGACTTTTGCACAGAAACTATATCAAACTTTTAAGGACCACAAGCGCTTTAGCAAGCCAAAATTGTCACAAACGGACTTCACAATTTGTCATTATGCTGGTGATGTTACTTACCAAACTGAATACTTCTTGGACAAAAACAAAGATTATGTTGTTGCAGAGCATCAAGCGCTGTTGAGTGCTTCTACGTGCACGTTCGTTTCAGGGTTGTTCCCTCCTTTACCTGAGGAATCTTCTAAATCATCTAAGTTCTCATCAATAGGATCGCGATTTAAGACACAACTTCAGTCTTTGCTTGAGACACTAAATGCCACCGAGCCACACTACATACGCTGCGTAAAGCCAAATAACCTTCTTAAGCCAGCCATGTTTGAGAATAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTGATGGAAGCAATCAGGATAAGCTGTGCTGGATATCCCACTAGGAAGATATTTGATGAATTTATTCGTCGGTTTAGTATCTTGGCACCTGATGTTTTGAATGGGAGCTGTGATGAAGTCACTGCATGTAAGAGGCTTTTGGATAAGGTTAACCTTAAAGGGTATCAGATTGGTAAAACCAAAGTATTTCTTAGAGCTGGTCAAATGGCAGAATTAGATGCTAGCCGAAGTGTGGTCTTGGGAAGATCTGCTATTATTATTCAAAGGAAATTTCGCTCATATCTGGGACGCAAAATCTTCATTTTGCTGCGACTTTCTGCTGTGCAAATCCAAACCATATGTAGAGGGCAAGTTGCACGCCAACAGTATGCAAACATCAGAAGGGAAGCTGCTTCTATCAGACTCCAGAAGAATTGGCGCATGTTTTTTTCCCGATGTTGCTATAAAAAGTTATGTGCTTCAGCTATAGCTATTCAAGCTGGTATCCATGGTATGGTTGCTCGTAGAGAGCTTAAGTTTAGGAGGCAGACAAGAGCTGCAATTATCATTCAGAGTCAATTTCGGCAACACCTGGCCCGTAATCAGTATCTGCGGATAAGGAAAGCTGCAATTGCTACGCAATGTGCTTGGAGAGGGAAAGTTGCACGCAGAGAACTTCGGAAGCTTAAAGCGGCTGCTAAAGAAACTGGTGCTCTCCAAGCTGCTAAAAATAAGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGATTGCAGCTAGAGAAACGGATGAGGGCTGATATTGAGGAGGCCAAAACTCAGGAAAACACAAAATTGCATTCTGCTTTCCAAGAAATGCAAATTCAATTTCAGGAAACAAAAGCACTGCTTATTAAGGAACGTGATGCTGCAAAGGAAGTTGTTGAGCATGTACCGGTCATACAGGAGGTTCCTGTTGTTGATCACGAACTGATCAATAAGCTAACTGCTGAAAATGAACAACTGAAGGCTCTCGTCAATTCTCTGGAAACTAAAATTGATGAAACAGAAAAGAAATTTGAAGAAAGTACCAGACTGAGTGAAGAGCGGCTGAAGCAGGCTTTGGATGCAGAGTCAAAGATTATAGAATTAAAGACTTCCATGCAAAGGCTTGAGGAAAAGTTATCTGACATGGAAACCGAGGACCAAATTCTGAGGCAGCAAGCACTACTAAATTCTTCTTCAAGAAAAATGTCTGAACATTTAACAATGGCAGCCAATCAGCCTTTGGAAAATGGCCACCATGAATTACTAAGCAGTGCACCGTCAAAAAAGTTTGGTACAGATTCTGATGCTAAATTGAGGAGATCCCAAGTTGAAAGGCAGCATGAGAGTGTAGATGCTCTTATGAAATGCCTGACACAGGATCTTGGGTTCAGTGAGGGGAAACCTGTTGCAGCTTTTACCATATATAAATCTCTTCTCCATTGGAGGTCATTTGAAGCAGAAAAAACAAGTGTATTTGACCGGCTTATTCAGCTGATTGGTTCTGCAATTGAGAATCAGGATGATAATGACCATATGGCTTATTGGTTATCCAATTCAACTACATTGTTGTTTCTTCTCCAGAAGAGTTTAAAAGCCTCTGGTACAACTGCACCACGGAAGCCTCCTACCCCAACATCATTGTTTGGGCGGATGACCCAAGGCTTCCGTTCATCTTCTGCCAACCTTTCAGTTGATGTAGTGCGGCAGGTTGAGGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTTACAGCATATGTAGAAAAGATATATGGAATAATTCGAGACAATTTAAAGAAAGAATTGTCGCCATTGCTTTCATCTTGTATCCAGGCTCCCAGAACTTCAAGAGGAAGTATTTTAAAATCATCTGGACAGACAAATAGCAGTAGCACTCCTGCTAGTCCTTGGTTCAGCATCATTGAGAATCTTAATGATTTTCTTTATAGACTGAAGGGAAATTTTGTGCCTTCTATTTTGATTCAGAGGATATTCACTCAGGTTTTCTCATATATCAATGTACAGCTCTTCAATAGTCTACTACTTCGCCGCGAGTGCTGCACGTTTAGCAATGGAGAATATGTGAAGTCAGGGTTGGCTGAATTCGAGCTTTGGTGTTGCCAATCAAAAGAAGAGTATGCTGGATCATCATGGGATGAGCTAAAACACGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGACATTACAAATGACCTCTGTCCAATATTGAGTGTTCAGCAGCTTTATAGAATATGCACTCTTTATTGGGACGACAATTACAATACTAGGAGTGTAGCTCCTGATGTTATTTCTAGCATGTCGATTCTGATGACTGACGATTCGGATGAAGATAGTAATTCCTTTTTGTTGGATGACAATTCCAGTATACCTTTCTCAGTTGAAGACATATCCAGTTCCCTGCAAGAAAAGAATTTATCAGATATAAAGCATCCTGCAGAACTGCTCGAGAATCCGGCCTTCCAATTTTTACTGGATTAA | 4506 | 40.81 | MAGQASLVVGSHVWIEDPEVAWIDGEVVEVNGEDITVNCTSGKTVEVKLSNVNPKDPEFPPCGVDDMTRLAYLHEPGLLQNLKCRYDINEIYTYTGSILIAVNPFRRLPHLYDNHMMQQYKGAALGELSPHPFAIANSAYRLMINEGISQAILVSGESGAGKTESTKMLMHYLAYVGGRVGVKAAAGGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQNGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPTEDIEKYKLGKPTTFHYLNQSNCYELDGVDDSKEYHSTRKAMGVVGISTSEQDAIFRVVAAILHLGNVEFAKGEDADSSEPKDDKSRFHLKMAAKLFMCDEKSLEDSMCSRVIVTRDETITKCLDPESATVSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDILDLIEKKPGGVIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLSQTDFTICHYAGDVTYQTEYFLDKNKDYVVAEHQALLSASTCTFVSGLFPPLPEESSKSSKFSSIGSRFKTQLQSLLETLNATEPHYIRCVKPNNLLKPAMFENNNVLQQLRCGGVMEAIRISCAGYPTRKIFDEFIRRFSILAPDVLNGSCDEVTACKRLLDKVNLKGYQIGKTKVFLRAGQMAELDASRSVVLGRSAIIIQRKFRSYLGRKIFILLRLSAVQIQTICRGQVARQQYANIRREAASIRLQKNWRMFFSRCCYKKLCASAIAIQAGIHGMVARRELKFRRQTRAAIIIQSQFRQHLARNQYLRIRKAAIATQCAWRGKVARRELRKLKAAAKETGALQAAKNKLEKQVEELTWRLQLEKRMRADIEEAKTQENTKLHSAFQEMQIQFQETKALLIKERDAAKEVVEHVPVIQEVPVVDHELINKLTAENEQLKALVNSLETKIDETEKKFEESTRLSEERLKQALDAESKIIELKTSMQRLEEKLSDMETEDQILRQQALLNSSSRKMSEHLTMAANQPLENGHHELLSSAPSKKFGTDSDAKLRRSQVERQHESVDALMKCLTQDLGFSEGKPVAAFTIYKSLLHWRSFEAEKTSVFDRLIQLIGSAIENQDDNDHMAYWLSNSTTLLFLLQKSLKASGTTAPRKPPTPTSLFGRMTQGFRSSSANLSVDVVRQVEAKYPALLFKQQLTAYVEKIYGIIRDNLKKELSPLLSSCIQAPRTSRGSILKSSGQTNSSSTPASPWFSIIENLNDFLYRLKGNFVPSILIQRIFTQVFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAEFELWCCQSKEEYAGSSWDELKHVRQAVGFLVIHQKSRISYDDITNDLCPILSVQQLYRICTLYWDDNYNTRSVAPDVISSMSILMTDDSDEDSNSFLLDDNSSIPFSVEDISSSLQEKNLSDIKHPAELLENPAFQFLLD | 1501 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 46587930 | 46605426 | + | evm.model.ptg000013l.1382 | HCH7g1382 | 548667 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g1382 | 1501 | PANTHER | MYOSIN | 834 | 1446 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| HCH7g1382 | 1501 | Gene3D | - | 671 | 737 | - | - | |
| HCH7g1382 | 1501 | PRINTS | Myosin heavy chain signature | 433 | 461 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | PRINTS | Myosin heavy chain signature | 486 | 514 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | PRINTS | Myosin heavy chain signature | 200 | 227 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | Pfam | IQ calmodulin-binding motif | 789 | 808 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | Pfam | IQ calmodulin-binding motif | 765 | 782 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | Pfam | IQ calmodulin-binding motif | 741 | 759 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | Pfam | IQ calmodulin-binding motif | 836 | 855 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | Pfam | IQ calmodulin-binding motif | 859 | 879 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | SMART | iq_5 | 809 | 831 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | SMART | iq_5 | 834 | 856 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | SMART | iq_5 | 786 | 808 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | SMART | iq_5 | 761 | 783 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | SMART | iq_5 | 738 | 760 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515(InterPro) | |
| HCH7g1382 | 1501 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 316 | 605 | - | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | Myosin motor domain profile. | 62 | 736 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | FunFam | Myosin heavy chain | 256 | 311 | - | - | |
| HCH7g1382 | 1501 | Pfam | Myosin head (motor domain) | 64 | 724 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | ProSiteProfiles | Dilute domain profile. | 1153 | 1448 | IPR002710 | - | |
| HCH7g1382 | 1501 | CDD | MYSc_Myo11 | 76 | 724 | IPR036018 | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | Pfam | Myosin N-terminal SH3-like domain | 9 | 52 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | FunFam | Myosin 2 | 316 | 432 | - | - | |
| HCH7g1382 | 1501 | Pfam | DIL domain | 1324 | 1428 | IPR002710 | - | |
| HCH7g1382 | 1501 | Coils | Coil | 881 | 915 | - | - | |
| HCH7g1382 | 1501 | Gene3D | - | 11 | 55 | IPR008989 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0051015(InterPro) | |
| HCH7g1382 | 1501 | SMART | MYSc_2a | 56 | 737 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| HCH7g1382 | 1501 | Gene3D | Kinesin motor domain | 65 | 666 | IPR036961 | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | IQ motif profile. | 787 | 816 | - | - | |
| HCH7g1382 | 1501 | Gene3D | - | 256 | 314 | - | - | |
| HCH7g1382 | 1501 | Gene3D | - | 443 | 627 | - | - | |
| HCH7g1382 | 1501 | CDD | MyosinXI_CBD | 1104 | 1470 | IPR037975 | GO:0007015(InterPro) | |
| HCH7g1382 | 1501 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 795 | 891 | IPR027417 | - | |
| HCH7g1382 | 1501 | FunFam | unconventional myosin-Va | 837 | 885 | - | - | |
| HCH7g1382 | 1501 | Coils | Coil | 976 | 1010 | - | - | |
| HCH7g1382 | 1501 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 33 | 790 | IPR027417 | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | IQ motif profile. | 812 | 839 | - | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | IQ motif profile. | 762 | 791 | - | - | |
| HCH7g1382 | 1501 | Gene3D | - | 739 | 788 | - | - | |
| HCH7g1382 | 1501 | Gene3D | - | 789 | 836 | - | - | |
| HCH7g1382 | 1501 | Gene3D | - | 837 | 886 | - | - | |
| HCH7g1382 | 1501 | Coils | Coil | 1018 | 1052 | - | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | IQ motif profile. | 835 | 864 | - | - | |
| HCH7g1382 | 1501 | ProSiteProfiles | IQ motif profile. | 858 | 887 | - | - | |
| HCH7g1382 | 1501 | SMART | DIL_2 | 1323 | 1430 | IPR002710 | - | |
| HCH7g1382 | 1501 | FunFam | Class V myosin | 443 | 587 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH4g0507 | HCH-Chr4:3321214 | HCH7g1382 | HCH-Chr7:46587930 | 0.00E+00 | dispersed | |
| HCH5g0949 | HCH-Chr5:8205255 | HCH7g1382 | HCH-Chr7:46587930 | 0.00E+00 | dispersed | |
| HCH5g1301 | HCH-Chr5:49021201 | HCH7g1382 | HCH-Chr7:46587930 | 0.00E+00 | dispersed | |
| HCH7g1382 | HCH-Chr7:46587930 | HCH8g0621 | HCH-Chr8:42990089 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH7g1382 | K10357 | - | csv:101221506 | 2504.17 |