Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1465 ATGTCATATCAATCGAAGTTTGTTAAGAGTGAGGAATCTCAGTTTAGGAAATCTGGACGATCCAGAAGCTTTAATCAGCAAGGAATATCGTCACGACCTCACTCTAACCCCGCCGGTGCCCGTGCTGGTACCGGTACCGGTAACAGCAGGTTTGTCCCTGCCGCGTCGATTGTCTCTAATGAAAGTTCTAAGAAGTCTTATGATGCACAACATGGAGGGCAATCTAGGGCTGGTGTTTCGACTGTAAATTCTACCACTCCTACTAATGGTTCTACCGCTCGTGGAGTGCAAAAGGGTTATCACGTTCAGCCGCAATTGAATGGTGCTGCTGCATCCAATCCAATTAAATTGTCAGGATCGCAGAGCGGGATTGTTCCGAAGAATGCAACTTCCCAGTCTACCTCAAAAACTTCCGACTCTACTGCACCTTCTACCCCCTTTAAAGACTTGGAAGAACAGCCTAAAGCATTTTCACTTCAATTTGGATCTATAAGTCCTGGCTTCCAGGTTCCTCAAACCAGCTCAGCTCCTACAAATTTGGATGAATGGAAACTTGACCAGGAAGGACACTGTTTGCTTAAATCTTTTCCTCCAGCTTTTCTGCAAGCTCCCAAGCAGCAGTTACACCATTTGAATCAAGATCTTGCTTCTCAAGGACAGAGTGAAGTTTCTGTAATTGTACAGGCTTCAGAATCAAATGCTGCCAGGGAGGGAGGCATGTCCACTTCTCCAAAAGAAGTTTTTGGTCAAGAGTCTAGTGTTGAGATCTCAGATCCCATTTGTTATTCTAAGGTGGAGTCTTCTCTGAAGTTTGAGCTATCAAAGCATGAGCCTGTTGGAACCAATGAGGTTGTAGAGAGAAGATTGCCTGAGTCTATAGAAGGCGCTTACAGTTCTGGTTTTATTTCTGAATCTCTCTCACAGAAATCTTATTCTATTGAACCAAATAAACCTCAATCTTGTATAAAGTCAAAAACGGAAACTAATGGCAGGGATTCGTACTTAGAAATACAGGAGACGTTGGTTGAAGTTGACAGCAAAGAAGATTATAAAAATATTTCCAACTCCACAACTCATAGTTATAAAAGTGATAGTACTACTGATTGCACTGATGTGGGCAAGAAAGACCTTCAGTATGCTCCTGTTCAACCATCTGAGCTCTCAGAGATGAAGCATGAAGGAGATGGAGTAAAGTGTGCAGGTTTTCGTGGTGATTCCATTTTAATACCATTTGTGAAGGATAAACCTGTTAAGGACATGGACAAGATGAAGAATGCATCTACTAGAGGGAAGAAGAAGAGAAAGGAAACTCTTCATAAGGCAGATGCTGCTGGGACTACTTCTGACCTTTATACGGCATACAAAGGACCTGAAGAGAAGAAAGAGATTCTAATGCCTGCTGAAAGCTGTAATGATAGCTTAAATTTGAAGCATGGATGCACTGATTCTGTTAAGGAAGAAGCTGTCTTGACCAAGAAGGACGCTCGGGGTAAACTTGAGCCACATGATTGGGAAGATGCAATTGTGACTTGTTTGATCAAATTGGAACACAAGAGTCATGGGGACGAGGCCATAGGTAAAGTAGAGATGCACCAGAAGGATGGAAGTGGAAATATGACCAAGAAATACTCTAGAGATTTCATCTTGAAATTTGCAGAGCAGTTTGTAGACCTCCCCCTTGGGTTTGAAATTACTTCTAAAATAGAGGCATCGATAAGTAGTAACCGCGGCTCTCGTCCTGTTAATTGTAATACAAATGCTAATCTAGGAAGAATGAGTAGGCCGAATGGAGGATCTCGACTAGACCTTCGTGAAAGTGGTGCTGATGACAGGTGGAGCAAAGTTTCAGGGCGGGACTTGCTACTGGATAGTGCTTTTGGAGGGAATGCTGGGTCTCGAATTGCACTAGGTGCTGTTAATGGTGTTTTAAAGAACCAAAGAGCTCAAGTACATAATCAATACCCAGGAGGGATCATATCTGGTCCAATGTCACCCATTAGTTCTCAGGGAGGGATCCAACAAAATGGCTCCAATGCTGATAGGTGGCACAGAGCTACTAACTATCAGCTGAAAGGTTTAATTTCCCCTCCAACACAATTAAAAACGATGCACAAAGCCGAGAAGAAGTATGAAGTGGGTAAAGTGGCTGATGAGGAAGATACCAAACAAAGGCAGTTGAAAGCTATACTAAACAAGCTAACTCCGCAAAATTTTGAGAAGCTCTTTGAGCAAGTGAAAGCAGTTAATATTGGAAGCGTCAAGACACTATCTGGCGTCATCTCACAGATCTTTGACAAAGCTTTGATGGAGCCCACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATTTGGCTGGAGAATTACCAGATTTTAGTGAAGGTAATCAGAAAATTACTTTTAAGAGGTTGCTTTTAACCAAGTGTCAGGAGGAATTTGAGAGAGAGCAGGAAGAAAATGATGAAGTTGATGGTGTGGCTGAGATGAAACAGTCTGAAGGGGAAAGAGAAGCGAAGAGAATAAAAGCGCGCAAAAGAATGCTGGGTAATATCAGATTGATAGGGGAACTGTACAAAAAAAAGATGATAACCGAGAAAATTATGCATGAATGCATTAAGAAGTTGTTGGGTCAGTATCAGAATCCAGATGAGGAAGATATTGAAGCATTGTGCAAATTGATGAGCACGATAGGAGAGATGATTGATCACCCCAGAGCAAAGGAATATATGGCCATATATTTTGAGTCAATGACTAAATTATCTAATAACATGAAACTATCGTCTAGGGTTAGGTTCATGTTGAAAGATACAATTGATTTGAGAAAAAATAAATGGCAACAAAGGAGAAAAGTCGAAGGGCCCAAAAAAATTGACGAAGTGCACAGGGATGCTGTGCAAGAACGTCAAGCGCAGGCTAGTAGGTTAGGTTATGGTCCAGGGAACAATGCTTCATTGAAGAGGGGGTCATCCTTGGATTTTGGTTTTAGAGCATCTTCAACATTGCCTTCTCCCTATCCTCAGGTTGGTTTCCGTGGGATCTCAACCCAGGTTTTTGGTTCAGTCAGTCAAGATACTCGTACTGAACATAAACAGTTTTATGAGGCCAGGGCATTCTCAATTCCTTTGCCCCAAAGACATGTAGCTGATGAAACTATCACTTTGGGTCCTTTGGGTGGTTTAGCTAGAGGAATGTCAACTATAAGGCCGCAATCTGTTTCAGTTACTTCATTGGCAGATATGTCCAAAACTGTTGGTATTTCCCGAAGAATGACAGCTGGTTTAAATCCTCATAGGTCAGCTTCAGAGCATGAGACTTTCAGTTCCAGAGGGGATATCAGCCCAAGATATATGTCAGAGAAATTTGCAGGTCCAATCCCCTTTGATCAATCGGATCCTCGGGAGCCTGGTACAATTTTTGTAAATAGGCAACCGAGAAACATGGATAGTAGTCTTGATATGTCTCATTCAAGCTCCCTGACCAAACATGAACAACCAGCTTTGACGCCAAATGGTCTTTCTGAAGGAATGTCCGAAGATCGTCTGAGAGATAAGTCCGTGGCAGCAATTAGAGAATATTACAGTGCCAGAGATGAGAAAGAAGTTGCTCTGTGCATCAAGGACTTGAATTCTCCCAGCTTCCATTCATCCATGATTTCTCTTTGGATCACAGACTCATTTGAGAGAAAAAATATGGAAAGGGATCTTTTAGCCAGACTTCTTGTCAGCCTCACTAAATCAAAGGAGGGTATCTTGAGCCAAGTCCAGCTTGTCAAAGGAATTAAATGTGTTCTTGCCACTCTGGAGGATGCTGTTAATGATGCCCCAAAAGCTCCTGAATTTATGGGCTGCATACTTGCTAACTTGATCTGGGAAAATTTGATTTCATTAAGAGAAATTGGGAAGCTAATATATGAAGGTGGAGAGGAGCCAGGATGCCTTGTACAAGTCGGGCTCGCGGCTGAAATTCTCGGTAACATGTTGAAGGTGATCCAATTGGAGAAAGGTGATAGTTTTCTAAATGAGATTCTTAAAAGTTCTAATCTGCGTCTTGAAAGATTTCGTCCCCCAAAACCAAACAAGTCCGTGATATTAGAAAATTTTATTTAG 4104 41.96 MSYQSKFVKSEESQFRKSGRSRSFNQQGISSRPHSNPAGARAGTGTGNSRFVPAASIVSNESSKKSYDAQHGGQSRAGVSTVNSTTPTNGSTARGVQKGYHVQPQLNGAAASNPIKLSGSQSGIVPKNATSQSTSKTSDSTAPSTPFKDLEEQPKAFSLQFGSISPGFQVPQTSSAPTNLDEWKLDQEGHCLLKSFPPAFLQAPKQQLHHLNQDLASQGQSEVSVIVQASESNAAREGGMSTSPKEVFGQESSVEISDPICYSKVESSLKFELSKHEPVGTNEVVERRLPESIEGAYSSGFISESLSQKSYSIEPNKPQSCIKSKTETNGRDSYLEIQETLVEVDSKEDYKNISNSTTHSYKSDSTTDCTDVGKKDLQYAPVQPSELSEMKHEGDGVKCAGFRGDSILIPFVKDKPVKDMDKMKNASTRGKKKRKETLHKADAAGTTSDLYTAYKGPEEKKEILMPAESCNDSLNLKHGCTDSVKEEAVLTKKDARGKLEPHDWEDAIVTCLIKLEHKSHGDEAIGKVEMHQKDGSGNMTKKYSRDFILKFAEQFVDLPLGFEITSKIEASISSNRGSRPVNCNTNANLGRMSRPNGGSRLDLRESGADDRWSKVSGRDLLLDSAFGGNAGSRIALGAVNGVLKNQRAQVHNQYPGGIISGPMSPISSQGGIQQNGSNADRWHRATNYQLKGLISPPTQLKTMHKAEKKYEVGKVADEEDTKQRQLKAILNKLTPQNFEKLFEQVKAVNIGSVKTLSGVISQIFDKALMEPTFCEMYANFCLHLAGELPDFSEGNQKITFKRLLLTKCQEEFEREQEENDEVDGVAEMKQSEGEREAKRIKARKRMLGNIRLIGELYKKKMITEKIMHECIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPRAKEYMAIYFESMTKLSNNMKLSSRVRFMLKDTIDLRKNKWQQRRKVEGPKKIDEVHRDAVQERQAQASRLGYGPGNNASLKRGSSLDFGFRASSTLPSPYPQVGFRGISTQVFGSVSQDTRTEHKQFYEARAFSIPLPQRHVADETITLGPLGGLARGMSTIRPQSVSVTSLADMSKTVGISRRMTAGLNPHRSASEHETFSSRGDISPRYMSEKFAGPIPFDQSDPREPGTIFVNRQPRNMDSSLDMSHSSSLTKHEQPALTPNGLSEGMSEDRLRDKSVAAIREYYSARDEKEVALCIKDLNSPSFHSSMISLWITDSFERKNMERDLLARLLVSLTKSKEGILSQVQLVKGIKCVLATLEDAVNDAPKAPEFMGCILANLIWENLISLREIGKLIYEGGEEPGCLVQVGLAAEILGNMLKVIQLEKGDSFLNEILKSSNLRLERFRPPKPNKSVILENFI 1367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47287600 47293856 - evm.model.ptg000013l.1465 HCH7g1465 548750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1465 1367 ProSiteProfiles MI domain profile. 1179 1303 IPR003891 -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 574 605 - -
HCH7g1465 1367 Pfam MIF4G domain 724 943 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
HCH7g1465 1367 Gene3D - 723 956 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 49 96 - -
HCH7g1465 1367 Pfam MA3 domain 1180 1292 IPR003891 -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 816 837 - -
HCH7g1465 1367 FunFam Eukaryotic translation initiation factor 4G 1173 1366 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 110 147 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 420 442 - -
HCH7g1465 1367 SMART if4_15 723 943 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
HCH7g1465 1367 MobiDBLite consensus disorder prediction 574 593 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 1 96 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 19 34 - -
HCH7g1465 1367 SUPERFAMILY ARM repeat 1174 1363 IPR016024 -
HCH7g1465 1367 SMART ma3_7 1180 1294 IPR003891 -
HCH7g1465 1367 FunFam Eukaryotic translation initiation factor 4G 723 956 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 1141 1170 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 110 148 - -
HCH7g1465 1367 MobiDBLite consensus disorder prediction 823 837 - -
HCH7g1465 1367 SUPERFAMILY ARM repeat 716 945 IPR016024 -
HCH7g1465 1367 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 276 1359 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
HCH7g1465 1367 MobiDBLite consensus disorder prediction 1140 1178 - -
HCH7g1465 1367 Gene3D - 1172 1367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g1465 HCH-Chr7:47287600 HCH8g0947 HCH-Chr8:45684931 2.30E-50 dispersed
HCH7g1465 HCH-Chr7:47287600 HCH7g1467 HCH-Chr7:47309455 4.60E-38 proximal
HCH6g1375 HCH-Chr6:47686395 HCH7g1465 HCH-Chr7:47287600 1.20E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1465 K03260 - csv:101222372 1180.62