Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g1465 | ATGTCATATCAATCGAAGTTTGTTAAGAGTGAGGAATCTCAGTTTAGGAAATCTGGACGATCCAGAAGCTTTAATCAGCAAGGAATATCGTCACGACCTCACTCTAACCCCGCCGGTGCCCGTGCTGGTACCGGTACCGGTAACAGCAGGTTTGTCCCTGCCGCGTCGATTGTCTCTAATGAAAGTTCTAAGAAGTCTTATGATGCACAACATGGAGGGCAATCTAGGGCTGGTGTTTCGACTGTAAATTCTACCACTCCTACTAATGGTTCTACCGCTCGTGGAGTGCAAAAGGGTTATCACGTTCAGCCGCAATTGAATGGTGCTGCTGCATCCAATCCAATTAAATTGTCAGGATCGCAGAGCGGGATTGTTCCGAAGAATGCAACTTCCCAGTCTACCTCAAAAACTTCCGACTCTACTGCACCTTCTACCCCCTTTAAAGACTTGGAAGAACAGCCTAAAGCATTTTCACTTCAATTTGGATCTATAAGTCCTGGCTTCCAGGTTCCTCAAACCAGCTCAGCTCCTACAAATTTGGATGAATGGAAACTTGACCAGGAAGGACACTGTTTGCTTAAATCTTTTCCTCCAGCTTTTCTGCAAGCTCCCAAGCAGCAGTTACACCATTTGAATCAAGATCTTGCTTCTCAAGGACAGAGTGAAGTTTCTGTAATTGTACAGGCTTCAGAATCAAATGCTGCCAGGGAGGGAGGCATGTCCACTTCTCCAAAAGAAGTTTTTGGTCAAGAGTCTAGTGTTGAGATCTCAGATCCCATTTGTTATTCTAAGGTGGAGTCTTCTCTGAAGTTTGAGCTATCAAAGCATGAGCCTGTTGGAACCAATGAGGTTGTAGAGAGAAGATTGCCTGAGTCTATAGAAGGCGCTTACAGTTCTGGTTTTATTTCTGAATCTCTCTCACAGAAATCTTATTCTATTGAACCAAATAAACCTCAATCTTGTATAAAGTCAAAAACGGAAACTAATGGCAGGGATTCGTACTTAGAAATACAGGAGACGTTGGTTGAAGTTGACAGCAAAGAAGATTATAAAAATATTTCCAACTCCACAACTCATAGTTATAAAAGTGATAGTACTACTGATTGCACTGATGTGGGCAAGAAAGACCTTCAGTATGCTCCTGTTCAACCATCTGAGCTCTCAGAGATGAAGCATGAAGGAGATGGAGTAAAGTGTGCAGGTTTTCGTGGTGATTCCATTTTAATACCATTTGTGAAGGATAAACCTGTTAAGGACATGGACAAGATGAAGAATGCATCTACTAGAGGGAAGAAGAAGAGAAAGGAAACTCTTCATAAGGCAGATGCTGCTGGGACTACTTCTGACCTTTATACGGCATACAAAGGACCTGAAGAGAAGAAAGAGATTCTAATGCCTGCTGAAAGCTGTAATGATAGCTTAAATTTGAAGCATGGATGCACTGATTCTGTTAAGGAAGAAGCTGTCTTGACCAAGAAGGACGCTCGGGGTAAACTTGAGCCACATGATTGGGAAGATGCAATTGTGACTTGTTTGATCAAATTGGAACACAAGAGTCATGGGGACGAGGCCATAGGTAAAGTAGAGATGCACCAGAAGGATGGAAGTGGAAATATGACCAAGAAATACTCTAGAGATTTCATCTTGAAATTTGCAGAGCAGTTTGTAGACCTCCCCCTTGGGTTTGAAATTACTTCTAAAATAGAGGCATCGATAAGTAGTAACCGCGGCTCTCGTCCTGTTAATTGTAATACAAATGCTAATCTAGGAAGAATGAGTAGGCCGAATGGAGGATCTCGACTAGACCTTCGTGAAAGTGGTGCTGATGACAGGTGGAGCAAAGTTTCAGGGCGGGACTTGCTACTGGATAGTGCTTTTGGAGGGAATGCTGGGTCTCGAATTGCACTAGGTGCTGTTAATGGTGTTTTAAAGAACCAAAGAGCTCAAGTACATAATCAATACCCAGGAGGGATCATATCTGGTCCAATGTCACCCATTAGTTCTCAGGGAGGGATCCAACAAAATGGCTCCAATGCTGATAGGTGGCACAGAGCTACTAACTATCAGCTGAAAGGTTTAATTTCCCCTCCAACACAATTAAAAACGATGCACAAAGCCGAGAAGAAGTATGAAGTGGGTAAAGTGGCTGATGAGGAAGATACCAAACAAAGGCAGTTGAAAGCTATACTAAACAAGCTAACTCCGCAAAATTTTGAGAAGCTCTTTGAGCAAGTGAAAGCAGTTAATATTGGAAGCGTCAAGACACTATCTGGCGTCATCTCACAGATCTTTGACAAAGCTTTGATGGAGCCCACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATTTGGCTGGAGAATTACCAGATTTTAGTGAAGGTAATCAGAAAATTACTTTTAAGAGGTTGCTTTTAACCAAGTGTCAGGAGGAATTTGAGAGAGAGCAGGAAGAAAATGATGAAGTTGATGGTGTGGCTGAGATGAAACAGTCTGAAGGGGAAAGAGAAGCGAAGAGAATAAAAGCGCGCAAAAGAATGCTGGGTAATATCAGATTGATAGGGGAACTGTACAAAAAAAAGATGATAACCGAGAAAATTATGCATGAATGCATTAAGAAGTTGTTGGGTCAGTATCAGAATCCAGATGAGGAAGATATTGAAGCATTGTGCAAATTGATGAGCACGATAGGAGAGATGATTGATCACCCCAGAGCAAAGGAATATATGGCCATATATTTTGAGTCAATGACTAAATTATCTAATAACATGAAACTATCGTCTAGGGTTAGGTTCATGTTGAAAGATACAATTGATTTGAGAAAAAATAAATGGCAACAAAGGAGAAAAGTCGAAGGGCCCAAAAAAATTGACGAAGTGCACAGGGATGCTGTGCAAGAACGTCAAGCGCAGGCTAGTAGGTTAGGTTATGGTCCAGGGAACAATGCTTCATTGAAGAGGGGGTCATCCTTGGATTTTGGTTTTAGAGCATCTTCAACATTGCCTTCTCCCTATCCTCAGGTTGGTTTCCGTGGGATCTCAACCCAGGTTTTTGGTTCAGTCAGTCAAGATACTCGTACTGAACATAAACAGTTTTATGAGGCCAGGGCATTCTCAATTCCTTTGCCCCAAAGACATGTAGCTGATGAAACTATCACTTTGGGTCCTTTGGGTGGTTTAGCTAGAGGAATGTCAACTATAAGGCCGCAATCTGTTTCAGTTACTTCATTGGCAGATATGTCCAAAACTGTTGGTATTTCCCGAAGAATGACAGCTGGTTTAAATCCTCATAGGTCAGCTTCAGAGCATGAGACTTTCAGTTCCAGAGGGGATATCAGCCCAAGATATATGTCAGAGAAATTTGCAGGTCCAATCCCCTTTGATCAATCGGATCCTCGGGAGCCTGGTACAATTTTTGTAAATAGGCAACCGAGAAACATGGATAGTAGTCTTGATATGTCTCATTCAAGCTCCCTGACCAAACATGAACAACCAGCTTTGACGCCAAATGGTCTTTCTGAAGGAATGTCCGAAGATCGTCTGAGAGATAAGTCCGTGGCAGCAATTAGAGAATATTACAGTGCCAGAGATGAGAAAGAAGTTGCTCTGTGCATCAAGGACTTGAATTCTCCCAGCTTCCATTCATCCATGATTTCTCTTTGGATCACAGACTCATTTGAGAGAAAAAATATGGAAAGGGATCTTTTAGCCAGACTTCTTGTCAGCCTCACTAAATCAAAGGAGGGTATCTTGAGCCAAGTCCAGCTTGTCAAAGGAATTAAATGTGTTCTTGCCACTCTGGAGGATGCTGTTAATGATGCCCCAAAAGCTCCTGAATTTATGGGCTGCATACTTGCTAACTTGATCTGGGAAAATTTGATTTCATTAAGAGAAATTGGGAAGCTAATATATGAAGGTGGAGAGGAGCCAGGATGCCTTGTACAAGTCGGGCTCGCGGCTGAAATTCTCGGTAACATGTTGAAGGTGATCCAATTGGAGAAAGGTGATAGTTTTCTAAATGAGATTCTTAAAAGTTCTAATCTGCGTCTTGAAAGATTTCGTCCCCCAAAACCAAACAAGTCCGTGATATTAGAAAATTTTATTTAG | 4104 | 41.96 | MSYQSKFVKSEESQFRKSGRSRSFNQQGISSRPHSNPAGARAGTGTGNSRFVPAASIVSNESSKKSYDAQHGGQSRAGVSTVNSTTPTNGSTARGVQKGYHVQPQLNGAAASNPIKLSGSQSGIVPKNATSQSTSKTSDSTAPSTPFKDLEEQPKAFSLQFGSISPGFQVPQTSSAPTNLDEWKLDQEGHCLLKSFPPAFLQAPKQQLHHLNQDLASQGQSEVSVIVQASESNAAREGGMSTSPKEVFGQESSVEISDPICYSKVESSLKFELSKHEPVGTNEVVERRLPESIEGAYSSGFISESLSQKSYSIEPNKPQSCIKSKTETNGRDSYLEIQETLVEVDSKEDYKNISNSTTHSYKSDSTTDCTDVGKKDLQYAPVQPSELSEMKHEGDGVKCAGFRGDSILIPFVKDKPVKDMDKMKNASTRGKKKRKETLHKADAAGTTSDLYTAYKGPEEKKEILMPAESCNDSLNLKHGCTDSVKEEAVLTKKDARGKLEPHDWEDAIVTCLIKLEHKSHGDEAIGKVEMHQKDGSGNMTKKYSRDFILKFAEQFVDLPLGFEITSKIEASISSNRGSRPVNCNTNANLGRMSRPNGGSRLDLRESGADDRWSKVSGRDLLLDSAFGGNAGSRIALGAVNGVLKNQRAQVHNQYPGGIISGPMSPISSQGGIQQNGSNADRWHRATNYQLKGLISPPTQLKTMHKAEKKYEVGKVADEEDTKQRQLKAILNKLTPQNFEKLFEQVKAVNIGSVKTLSGVISQIFDKALMEPTFCEMYANFCLHLAGELPDFSEGNQKITFKRLLLTKCQEEFEREQEENDEVDGVAEMKQSEGEREAKRIKARKRMLGNIRLIGELYKKKMITEKIMHECIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPRAKEYMAIYFESMTKLSNNMKLSSRVRFMLKDTIDLRKNKWQQRRKVEGPKKIDEVHRDAVQERQAQASRLGYGPGNNASLKRGSSLDFGFRASSTLPSPYPQVGFRGISTQVFGSVSQDTRTEHKQFYEARAFSIPLPQRHVADETITLGPLGGLARGMSTIRPQSVSVTSLADMSKTVGISRRMTAGLNPHRSASEHETFSSRGDISPRYMSEKFAGPIPFDQSDPREPGTIFVNRQPRNMDSSLDMSHSSSLTKHEQPALTPNGLSEGMSEDRLRDKSVAAIREYYSARDEKEVALCIKDLNSPSFHSSMISLWITDSFERKNMERDLLARLLVSLTKSKEGILSQVQLVKGIKCVLATLEDAVNDAPKAPEFMGCILANLIWENLISLREIGKLIYEGGEEPGCLVQVGLAAEILGNMLKVIQLEKGDSFLNEILKSSNLRLERFRPPKPNKSVILENFI | 1367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 47287600 | 47293856 | - | evm.model.ptg000013l.1465 | HCH7g1465 | 548750 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g1465 | 1367 | ProSiteProfiles | MI domain profile. | 1179 | 1303 | IPR003891 | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 574 | 605 | - | - | |
HCH7g1465 | 1367 | Pfam | MIF4G domain | 724 | 943 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
HCH7g1465 | 1367 | Gene3D | - | 723 | 956 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 49 | 96 | - | - | |
HCH7g1465 | 1367 | Pfam | MA3 domain | 1180 | 1292 | IPR003891 | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 816 | 837 | - | - | |
HCH7g1465 | 1367 | FunFam | Eukaryotic translation initiation factor 4G | 1173 | 1366 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 110 | 147 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 420 | 442 | - | - | |
HCH7g1465 | 1367 | SMART | if4_15 | 723 | 943 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 574 | 593 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 19 | 34 | - | - | |
HCH7g1465 | 1367 | SUPERFAMILY | ARM repeat | 1174 | 1363 | IPR016024 | - | |
HCH7g1465 | 1367 | SMART | ma3_7 | 1180 | 1294 | IPR003891 | - | |
HCH7g1465 | 1367 | FunFam | Eukaryotic translation initiation factor 4G | 723 | 956 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 1141 | 1170 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 110 | 148 | - | - | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 823 | 837 | - | - | |
HCH7g1465 | 1367 | SUPERFAMILY | ARM repeat | 716 | 945 | IPR016024 | - | |
HCH7g1465 | 1367 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 276 | 1359 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER) | |
HCH7g1465 | 1367 | MobiDBLite | consensus disorder prediction | 1140 | 1178 | - | - | |
HCH7g1465 | 1367 | Gene3D | - | 1172 | 1367 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH7g1465 | HCH-Chr7:47287600 | HCH8g0947 | HCH-Chr8:45684931 | 2.30E-50 | dispersed | |
HCH7g1465 | HCH-Chr7:47287600 | HCH7g1467 | HCH-Chr7:47309455 | 4.60E-38 | proximal | |
HCH6g1375 | HCH-Chr6:47686395 | HCH7g1465 | HCH-Chr7:47287600 | 1.20E-28 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g1465 | K03260 | - | csv:101222372 | 1180.62 |