Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1470 ATGTTCCGACGAGCAACCACCCTTTTATCCCGTCCGATATTCTCTTCAAGATCTAGATTCTTCTCCACCGATCTCCCGGCGGCTTCCGTCACCGACGACGCTTTTATTGAAACATGGAAGAAAATAATCCCTAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGACTCCTCGTCCCGCTACTCCATCTTCGATCCCTACTAAACTTACTGTCAATTTGGTCCTTCCTTATTCCTCTGAGCTTTCCTCTAAAGAGGTCGACATGGTTATAATACCAGCAACAACCGGGCAAATGGGTGTTCTTCCTGGACACGTAGCTACGATTGCTGAGTTGAAACCGGGGGTTCTATCTGTACATGAAGGAAGTGACACGAAAAAGTATTTCGTGAGCAGCGGTTTTGCCTTCATTCATGCCAACTCTTTTGCTGACATAATTGCTGTCGAAGCCGTACCTTTAGAGCACATCGACGCCAACCAAGTACAGAAGGGTCTTGCTGAATTCACACAGAAGTTGAGCACTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTTGACTTGCACAGTGCAATGAATGCTGCTCTTACCGGATAG 603 46.6 MFRRATTLLSRPIFSSRSRFFSTDLPAASVTDDAFIETWKKIIPNIDPPKTPLSFMTPRPATPSSIPTKLTVNLVLPYSSELSSKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHANSFADIIAVEAVPLEHIDANQVQKGLAEFTQKLSTASTDLEKAEAQIGVDLHSAMNAALTG 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47322723 47324831 - evm.model.ptg000013l.1470 HCH7g1470 548755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1470 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 27 200 IPR001469 GO:0000275(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(PANTHER)|GO:0046933(InterPro)
HCH7g1470 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
HCH7g1470 200 Coils Coil 165 185 - -
HCH7g1470 200 NCBIfam ATP synthase F1 subunit epsilon 72 186 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
HCH7g1470 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
HCH7g1470 200 FunFam ATP synthase delta 59 156 - -
HCH7g1470 200 Gene3D - 59 156 IPR036771 -
HCH7g1470 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986(InterPro)
HCH7g1470 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
HCH7g1470 200 Gene3D - 157 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1470 K02134 - csv:101206104 328.176