Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1487 ATGGAGCAGCAATGTTCACATGGAAGAGGAGCGGAAGCAGTTTTACATCTCCAGCCAAACTCCTCAATTTCTGTTGCATATCATACACTCTTCGGTCCCCATGATGATCTTATCCTTTTTGAGGTTGATGAAAAGCTTCTAGAAGATGTTTTCCACCAGCGAGTAAGCATCAGAGGACAGTCAGAAGAAGAAGCAGTGTTTTGCACCAAGTCAAAAACTTACGGAATCAAATATGTGGGGACTTCCAATTCTGTACTCCTCATACCTCCATCAGGTCAACCAGAATACCTTGAAAATGAGCAAGATAACAATGAGAATGATAACGCCCAAAATGTTGCTTCTGTGATCAAAGTAGCACCAGGCATCATGGAACTTGTTGAGGTTGCTCCGAGGATCGATAAGCTTAAATTGCTTCTCTCAGAGAAACCATACAGCTTAAGTGATGAGTGGGAAAGTGAAGAGATGAATGATTTCGAAAAACAGATGTATAATTGGGATGATCTGATTAATAAGGTTCAAGCTAGCGATGATGAATTGAAAGCTGGATTGGAAGCACTTTCAGCGGTTGAGATTGATGGGTATTGGAGAATTGTGGATGAAAAGTACATGGACTCCATGCTGCAGATGCTTTTGCATAATTCAGTTTTGAAAGACTGGTCATTGGATGCACTTGATGAAAATGAAATCATGGGAGTGATGGAATCGGATGGTTTTTCCCAAACTCTTGTGCATCATTGTCTCCATGTTTATGGTCATAAATCGAATGAAGATGGTGGGGAAATTTATTCATGGAGATTGGATGAGAAACAGGTTTGTTTACATTTTGCAAGAGAAATCTTGAGGAAAGGGAAAATGAGAATGGAGAGTTTCATGGATGAATGGACACTGAAAATCCCACAAGGGATGCATGCTAACTTCAACCTACTAGAAGGTGAAGTTTTGACAGAAAGGCTTGGTGTTGAGATGTGGGTTCGTGGTTTCAGGGTTTCTTCATTGCCATCCAACCCCTCTGAGCGTTTCTCCATTTTGTTTAAAGAGCGACCGAAATGGGAATGGAGGGATCTTCAGCCATTCATCAGGGATCTTACGGTTCCAGGTCTTTCATCTGAAGGTTTGCTTCTCAAATATACCCGAAGAACTCAACCGAACCCCGAAGCAGAACCCATGTTCAGTGCAAGATAA 1182 41.62 MEQQCSHGRGAEAVLHLQPNSSISVAYHTLFGPHDDLILFEVDEKLLEDVFHQRVSIRGQSEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGQPEYLENEQDNNENDNAQNVASVIKVAPGIMELVEVAPRIDKLKLLLSEKPYSLSDEWESEEMNDFEKQMYNWDDLINKVQASDDELKAGLEALSAVEIDGYWRIVDEKYMDSMLQMLLHNSVLKDWSLDALDENEIMGVMESDGFSQTLVHHCLHVYGHKSNEDGGEIYSWRLDEKQVCLHFAREILRKGKMRMESFMDEWTLKIPQGMHANFNLLEGEVLTERLGVEMWVRGFRVSSLPSNPSERFSILFKERPKWEWRDLQPFIRDLTVPGLSSEGLLLKYTRRTQPNPEAEPMFSAR 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47472623 47473966 + evm.model.ptg000013l.1487 HCH7g1487 548772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1487 393 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 11 393 IPR019128 GO:0000775(PANTHER)|GO:0000785(PANTHER)|GO:0007064(InterPro)|GO:0031390(InterPro)|GO:0031390(PANTHER)|GO:0034088(PANTHER)
HCH7g1487 393 Pfam Sister chromatid cohesion protein Dcc1 38 359 IPR019128 GO:0007064(InterPro)|GO:0031390(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1487 K11271 - csv:101203202 627.476