Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1488 ATGCCTCCGAGGAAGAAAAAACCTAATTCCTCATCCGCTAAAAACTCCAATTCAAATCAACACTCTAATCCTTCCAAATTCGGCATCCAGCATTTCTTCGAACGCCACTCTCAGAATAATCCACACTCTCAGAAACTCACTTCACGTTCTTCCAATTCTAAATCTGACGTTTCTAGCTCCTTCATTTGTGGAGATGATACCGATGCCGTACCAGTCTTACCGCTGGATTCTAAGGCGAAGGCGAAGACGAAGACGGTGAATTTGCCGGTGATTCAACAAACGGATGTCATTTTAATTTCTGAAGAACATGAGAAAAAGAATGTATCACAGTGTGAAGAGGTCAATTGTTCATCTCTGAATACGACGCCTGAGAATTTGGTTAGAGAAGGAGAGAATCCGTCTGATAAGGCTTTTCCGGAGATTTCAAAGTCTGCGTCAGTGAAACGCTTCAAGTTTTCTCCCGGAATGCTGATTAAGCAAAGCCAAGATGATGGAGGTGACGAGATCACATGGAAGATATCTCCAGTAAACGAAAGGCTTCAGGCTGTTTCAAAGCAAATGCCGGAAACTATAAGAGTCTTAGCTAACTCCTCAAGGCTCAGCTCTTTGAGAATCCGACAATGCTCACAAAATAAGATTTCTTCTTGTGAGCCTGAGAATCTCGAGCAGTTGAGTTCATCTCCAAATCTGAGGTCTTCCGGAAGATCATTGGTTTCGATAAATAAGACTGGTTTAAAAAGGCTCAGACCTGACCGTGATTCGGAATGTGATGGAGTTTCAATTGATAGATTGACTAGCTCTAGTGGAGCTAATAGTCAGAGTCCATTTCGGACGCCCCCATCTTTGTCATATTGCGATAAGATTGCCAATGGTGTTGCATGTAATGAAGCACCCGATCAGCCAACTTTAAGGCAACACAAGAAGGCATTGCTTGAGCTCTTGGATCAAGTAGAAGATGCCATTGCTGTTGATACTGCAGCTTCCATGGACTTGGGGGTACATTCATCTATTTTACAAGGCACAAATAATTGCAAGATGCCTTTCAGAGTTGATTCAACAGCAATGGAAGTTGCTACAAAACTTCCAGACACTGTGACAAAGGCATCCCCTTCTGGTGACTTCCTTGTCTTGGAGGTTACTGAGAGTAAGCTGGTTGATTCATCTGATCTTCAACGTTCATACAAGGTTCTTCGCATACTAAATGAGCAAAGTGGAGAAGAACGGGCTGTATATCTTTGGGAAGATTGGTTTGACAGTGCTATTGCACCAGGAGATACTGTGAATATTATTGGTGAATTTGATGCCCAAGGAAGATGTCATGTTGACCATGACAATAATTTTGTTATCCTACACCCTGATATACTTGTCTCTGGAACTCGGGTTGCTGGTCATTTGACCTGTCCAAGGCGGAGTGTTCTCGATGAGAGGCTAAAATGTAATGAACAGTCAGCTTCAGCATTAATTGGTACTTTGCTGCACCAGGTCTTTCAGGCTGGTCTACTAGAAGAGGCACCAACTGCCACCTCTTTGGAAGAGTACTCAAGAATGGTGCTTCAGAAAAGTATGGAAAGTATATATGCATGTGGAGGAAATGAAAAGGATATATGCAAAACCATGAATGAGGCCATTCCTAAAATTTTGCATTGGATCACACTCTTCAAATGCTCAAAGGTTTCTGAAGCACCTTCTGTAGACTTTCGATCTGATGATGGTCCCAGGAAAGTTAGCATATCAGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCAAAATATGGTTTGAAAGGAATCATTGATGCATCTGTCAGGGTAGATGTCATGTCCAACTACAATGAACGCTCTCAGAATGTCATGCCTCTGGAGTTTAAAACTGGAAAAGTACCTGCTGGCCAGTCCTCCATGGAACATTGTGCTCAAGTGATCTTGTACACACTACTTATGTCCGAGAGGTACCAGAAAAGTGTTGGTTGTGGCCTGCTTTATTATCTCCAGTCAGATCATACACAGGGAATCCGGGTTCAAAGATCTGACTTGGTGGGGTTAATAATGCGTCGCAATGAGCTTGCAAATAATATTCTCAAGGCATCAACAGCACAATTACTTCCCCCTATGTTACAGATTCCAAGTGTGTGCAAAGGATGTCGCCATCTTGATGTCTGTACCATTTATCATAAGGTGCATAATGGAAGCAAAGAGAGTAGCGGGCTTGGAGATATATTTGACTCCCATACGAACCACTTGAAAGCTTCTCATGGCATTTTCCTTCGACATTGGGAAAGATTAATTGACTTAGAGGCCAAGGAGGCGGAGCTTGTAAAGAGGGGAATATGGCACTCATCTAGTGTGAAGAGAAATCAAATGTCCAATTGCCTTTCTTCTATTATTCTCGATACATTGGATGATCGCTTGCATGGTCATTTTGAAAAGGATAATCGATTCATTTATCGTTTTGTGCGTCAAGATCTGTCTTCATTATGTTTGAGAGATTCAAATGGTGATTATTCGAGCATAGCTTCTTCAACAAATGATATGGATTGTTCTCTTAGAGTTGGAGACTATGTGATACTTAGTACAGAATCTGGTCATCTGACAGTAGCAAGTGGGATTATAACAGATCTAACTCGCCTCCATGTATCTGTTTCTTTTTCTAAGTGCATACGTTTGCCTGGAAGCCATCCTTCTTCAGAGGTACATGATCTTATGCAGCAGGTCTGGAGAATTGACAAGGATGAATTTATGACTTCTTATGCTGTTATGAGGTTTAACCTCGTACAACTGTTTATGCAAGCTGGACAAAATGCTCATCTTAGAAAGATGATCGTTGATCTTTCGGCTCCGATATTTGACAGTGGATGCATATTCAGCCAGGACCCAGCAATATCTTATATCTGGTCTGAGAAGAATTTAAATGATGACCAGCGTCGAGCGATAATTAAGATTCTTACAGCAAAGGATTATGCTCTAATTCTAGGAATGCCTGGAACAGGCAAGACATCTACAATGGTTCATGCAGTCAAGGCTTTGTTGATGCGAGGTGCATCCATTTTGCTCACATCGTATACAAACACTGCTGTTGATAATCTACTCATTAAACTAAAATCTCAGAACATTGATTTCATGCGGATTGGAAGGCTTGATGCGGTGCATGATGATGTTCGCAGCCATTGCTTCTCGGAGTTGAATATACAAAGTGTCGAAGACATCAAAATGAGATTGGACCAAGTCAAAGTTGTTGCAGTTACTTGTTTGGGGATAACTAGTCCCTTGCTTGTCAATAAAAGATTTGACATATGCATAATGGATGAAGCTGGACAGACCACCCTTCCAGTCTCACTTGGGCCTTTGATGTTTGCTTCAACGTTTGTCCTTGTTGGGGATCACTATCAGCTACCTCCTCTTGTTAAGAGTGTAGAGGCTCGGGAAAACGGAATGGGCATAAGCTTGTTTTGCAGGCTTTCGGAAGCTCATCCTCAAGCAATTTCAGCATTACGAAGCCAGTATCGCATGTGTCAAGACATTATGGAATTATCAAATGCATTGATATATGGAGATAGACTGCGTTGTGGTTCTGAAGAAACAGCAAATGCAAAGCTTAAGGTTTCAAGTTTAAAGCTGTTACCATCCTGGCTTGAGAAGGTTCTAAACCCATGCAAACCAGTAATGTTTGTGTGTACAGATTTATTACCTGCTTATGAGAGAAAAGACCACAAGGCCGTGAACAACCCAATTGAAGCTAACATAATAGCAGCGGTCTCGAAGGGATTGCTTGATGGTGGAATTAAAGGGAGTGATATTGGCATCATTACTCCCTATAACTCCCAGGCAAGCGTAATTCTTCAAGCTATTAACATAGCCTCTGTGGAGATACATACCATTGACAAATACCAGGGAAGAGATAAGGACTGCATTTTGGTGTCCTTTGTTAGGTCAAGTGAAAATCCAAAGAACTGTACTTCCTCACTTCTTGGGGATTGGCACAGAATTAATGTCGCCATTACACGTGCGAAGAAAAAGTTGATCATGGTGGGATCACGTAAAACCCTATCAAAAGTTCCATTGTTGAAGCTTCTAATCAAGAAGGTTGAAGAGCAATCAGGCATCTTGAGTGTGACAAAGAAGGATTTTCACCAAAATAGTAAGCTTTTGGAATGCACTTAG 4158 41.68 MPPRKKKPNSSSAKNSNSNQHSNPSKFGIQHFFERHSQNNPHSQKLTSRSSNSKSDVSSSFICGDDTDAVPVLPLDSKAKAKTKTVNLPVIQQTDVILISEEHEKKNVSQCEEVNCSSLNTTPENLVREGENPSDKAFPEISKSASVKRFKFSPGMLIKQSQDDGGDEITWKISPVNERLQAVSKQMPETIRVLANSSRLSSLRIRQCSQNKISSCEPENLEQLSSSPNLRSSGRSLVSINKTGLKRLRPDRDSECDGVSIDRLTSSSGANSQSPFRTPPSLSYCDKIANGVACNEAPDQPTLRQHKKALLELLDQVEDAIAVDTAASMDLGVHSSILQGTNNCKMPFRVDSTAMEVATKLPDTVTKASPSGDFLVLEVTESKLVDSSDLQRSYKVLRILNEQSGEERAVYLWEDWFDSAIAPGDTVNIIGEFDAQGRCHVDHDNNFVILHPDILVSGTRVAGHLTCPRRSVLDERLKCNEQSASALIGTLLHQVFQAGLLEEAPTATSLEEYSRMVLQKSMESIYACGGNEKDICKTMNEAIPKILHWITLFKCSKVSEAPSVDFRSDDGPRKVSISEVIDIEEMAWAPKYGLKGIIDASVRVDVMSNYNERSQNVMPLEFKTGKVPAGQSSMEHCAQVILYTLLMSERYQKSVGCGLLYYLQSDHTQGIRVQRSDLVGLIMRRNELANNILKASTAQLLPPMLQIPSVCKGCRHLDVCTIYHKVHNGSKESSGLGDIFDSHTNHLKASHGIFLRHWERLIDLEAKEAELVKRGIWHSSSVKRNQMSNCLSSIILDTLDDRLHGHFEKDNRFIYRFVRQDLSSLCLRDSNGDYSSIASSTNDMDCSLRVGDYVILSTESGHLTVASGIITDLTRLHVSVSFSKCIRLPGSHPSSEVHDLMQQVWRIDKDEFMTSYAVMRFNLVQLFMQAGQNAHLRKMIVDLSAPIFDSGCIFSQDPAISYIWSEKNLNDDQRRAIIKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNTAVDNLLIKLKSQNIDFMRIGRLDAVHDDVRSHCFSELNIQSVEDIKMRLDQVKVVAVTCLGITSPLLVNKRFDICIMDEAGQTTLPVSLGPLMFASTFVLVGDHYQLPPLVKSVEARENGMGISLFCRLSEAHPQAISALRSQYRMCQDIMELSNALIYGDRLRCGSEETANAKLKVSSLKLLPSWLEKVLNPCKPVMFVCTDLLPAYERKDHKAVNNPIEANIIAAVSKGLLDGGIKGSDIGIITPYNSQASVILQAINIASVEIHTIDKYQGRDKDCILVSFVRSSENPKNCTSSLLGDWHRINVAITRAKKKLIMVGSRKTLSKVPLLKLLIKKVEEQSGILSVTKKDFHQNSKLLECT 1385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47475673 47489069 + evm.model.ptg000013l.1488 HCH7g1488 548773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1488 1385 PANTHER DNA2/NAM7 HELICASE FAMILY 55 1363 IPR045055 GO:0005737(PANTHER)|GO:0017108(PANTHER)|GO:0071932(PANTHER)
HCH7g1488 1385 CDD DEXXQc_DNA2 968 1168 IPR026851 GO:0017116(InterPro)
HCH7g1488 1385 MobiDBLite consensus disorder prediction 245 259 - -
HCH7g1488 1385 Gene3D - 1167 1382 IPR027417 -
HCH7g1488 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 967 1353 IPR027417 -
HCH7g1488 1385 Gene3D - 457 721 IPR011604 -
HCH7g1488 1385 FunFam DNA replication helicase Dna2 903 1166 - -
HCH7g1488 1385 Gene3D - 908 1166 IPR027417 -
HCH7g1488 1385 FunFam DNA replication helicase 1167 1380 - -
HCH7g1488 1385 FunFam DNA replication helicase Dna2 567 721 - -
HCH7g1488 1385 CDD DNA2_N-like 457 692 - -
HCH7g1488 1385 MobiDBLite consensus disorder prediction 216 240 - -
HCH7g1488 1385 MobiDBLite consensus disorder prediction 8 61 - -
HCH7g1488 1385 Pfam DNA replication factor Dna2 402 604 IPR014808 -
HCH7g1488 1385 Pfam AAA domain 968 1060 IPR041677 GO:0004386(InterPro)
HCH7g1488 1385 Pfam AAA domain 1068 1136 IPR041677 GO:0004386(InterPro)
HCH7g1488 1385 CDD SF1_C_Upf1 1169 1362 IPR047187 -
HCH7g1488 1385 Pfam AAA domain 1145 1345 IPR041679 -
HCH7g1488 1385 MobiDBLite consensus disorder prediction 1 61 - -
HCH7g1488 1385 MobiDBLite consensus disorder prediction 216 278 - -
HCH7g1488 1385 MobiDBLite consensus disorder prediction 260 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g1085 HCH-Chr6:45479697 HCH7g1488 HCH-Chr7:47475673 1.20E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1488 K10742 - csv:101220726 2026.52