Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g1495 | ATGGAGGTGAGCTCCATTTTGGGAGTGATTTTGTGCACATGGATTGGATTTGCAGGGGTAAAATGGGTATTAAAAAGTGTAAATAGGTGGTTTTATGAATCAAAGTTGGGGGAAAAGAGGCTCTCTCTTCCTCCTGGTGATTTGGGTTGGCCTTTGCTTGGCAACATGCTCACCTTTCTTAATGCTTTCAAGTCCAAAGACCCTGAAACCTTCATTGGAAGCTATATTTCAAGGTACGGAAAAACCGGAATATACAAAGCATTCTTATTCGGAAGCCCTAGCGTGATCGTGACGACACCGGAAACATGCAGAAAAGTTTTAACCGACGACGACGCCTTCACGCCCGGTTGGCCACGCGCCGCCATAGAACTAATCGGAAAAAAATCATTCATTCAAATCTCTAATGAGGAACACAAACGCCTCCGCCGCTTAACCTCCGCTCCGGTGAACGGTTTCGAGGCGTTAACCAATTACGTACCGTACATCGAACAAATCGTCGTATCTTCTCTTGAGAAATGGTCGAAAATGGGACAACTCGAATTCTTAACTCAACTTCGCAAAATCACTTTCACAATTATCATGCAGATTTTCCTGAGCACCGAAAGCGAACCGGTAATGGAAGCGTTGGAGAAGGAATACACTAAGCTGAATCACGGCGTTCGTGCAATGAGAATCAATATTCCTGGATTTGCTTATCATACTGCACTTAAGGCTAGGAAGAAACTTGTGGCTACATTGCAGTCCATTGTGACTGATCGAAGAAGCCGTAGGATGGATAATTTGACGACGAAGAAAAAGGATATGATGGATGCTTTGATTGATGTGGAAGATGAGAAGGGAAGAAAGTTGTCTGATGAAGAAATTATTGATATTTTGGTGATGTACTTGAATGCAGGGCATGAATCTTCAGGCCATACTATGATGTGGGCGACCCTTTTGCTGAATCAACATCCAGAATTTCTCAAGATAGCTAAGGCAGAACAGGAGGAGATAATAAAGAGGAGGCCTCCAGGCCAAAAGGGATTGACATTGAAAGAAATCAGGGAGATGAAATATGTCGACAAAGTGATCGATGAGACCCTTCGTGTTATATCATTCTCTCTTGTTGTCTTCAGAGAGGCACAAATGGATGTGAAACTTAATGGTTATCTAATTCCCAAAGGATGGAAAGTTCTGGCTTGGTTCAGGACTATTCACTATGACTCTGATACCTACCCAGATCCAAAGACATTCAATCCTTCCAGATGGGATGGATTTATACCCAAAGCTGGAGAGTTTCTTCCCTTTGGAGCAGGAAGCCGGCTATGCCCAGGGAATGATCTAGCCAAATTGGAAATCGCCATTTTCCTCCACCATTTCCTCCTCAATTACCAGCTGGAATGGCTAACTCCGGAATGCCCTATCATGTATTTGCCCCATACAAGGCCCTTAGACAATTGCTTGGCAGTAATCAGGAAGAATCCCTCCACAGTTGCTTGA | 1479 | 43.75 | MEVSSILGVILCTWIGFAGVKWVLKSVNRWFYESKLGEKRLSLPPGDLGWPLLGNMLTFLNAFKSKDPETFIGSYISRYGKTGIYKAFLFGSPSVIVTTPETCRKVLTDDDAFTPGWPRAAIELIGKKSFIQISNEEHKRLRRLTSAPVNGFEALTNYVPYIEQIVVSSLEKWSKMGQLEFLTQLRKITFTIIMQIFLSTESEPVMEALEKEYTKLNHGVRAMRINIPGFAYHTALKARKKLVATLQSIVTDRRSRRMDNLTTKKKDMMDALIDVEDEKGRKLSDEEIIDILVMYLNAGHESSGHTMMWATLLLNQHPEFLKIAKAEQEEIIKRRPPGQKGLTLKEIREMKYVDKVIDETLRVISFSLVVFREAQMDVKLNGYLIPKGWKVLAWFRTIHYDSDTYPDPKTFNPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEIAIFLHHFLLNYQLEWLTPECPIMYLPHTRPLDNCLAVIRKNPSTVA | 492 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 47560376 | 47567493 | + | evm.model.ptg000013l.1495 | HCH7g1495 | 548780 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g1495 | 492 | FunFam | Ent-kaurenoic acid oxidase | 34 | 487 | - | - | |
| HCH7g1495 | 492 | CDD | CYP90-like | 76 | 480 | - | - | |
| HCH7g1495 | 492 | SUPERFAMILY | Cytochrome P450 | 39 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PANTHER | CYTOCHROME P450 26 | 42 | 464 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| HCH7g1495 | 492 | Coils | Coil | 258 | 278 | - | - | |
| HCH7g1495 | 492 | Coils | Coil | 206 | 226 | - | - | |
| HCH7g1495 | 492 | PRINTS | E-class P450 group I signature | 307 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | PRINTS | P450 superfamily signature | 298 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | Pfam | Cytochrome P450 | 44 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | Gene3D | Cytochrome P450 | 33 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1495 | 492 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH4g0644 | HCH-Chr4:4222083 | HCH7g1495 | HCH-Chr7:47560376 | 5.20E-74 | dispersed | |
| HCH6g1791 | HCH-Chr6:50224219 | HCH7g1495 | HCH-Chr7:47560376 | 1.30E-52 | dispersed | |
| HCH7g1495 | HCH-Chr7:47560376 | HCH12g0579 | HCH-Chr12:3396776 | 1.40E-21 | dispersed | |
| HCH5g0291 | HCH-Chr5:1760585 | HCH7g1495 | HCH-Chr7:47560376 | 1.90E-127 | wgd | |
| HCH6g1096 | HCH-Chr6:45600658 | HCH7g1495 | HCH-Chr7:47560376 | 9.20E-138 | wgd | |
| HCH6g1355 | HCH-Chr6:47571321 | HCH7g1495 | HCH-Chr7:47560376 | 6.20E-211 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH7g1495 | K04123 | - | csv:101221667 | 791.571 |