Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1512 ATGGGAGAAGAGTTAAAATTATTAAGAACATGGTCAAGTCCATTTGCTCTAAGAATTGTATGGGCACTCAAATTGAAGGGCTTAGAATACGATACCATTTATGAAGATCTAGGTAACAAGAGCCCTCTTCTTCTCCACTTCAATCCCATTCACAAGAAAGTTCCAGTCCTCGTTCATGGCGGCAAACCCATCGCTGAATCTCTAATCATCTTAGAATATATCGATGAAACATGGAAGCAGAATCCATTGCTGCCTCAAGATCCATATGACAGAGCTGTCGCTCGCTTTTGGGCTCAGTTTGGAGATGATAAGGTTTTATCATCAATTAAGGAATGGTTTATCAGTCAAGGAAAAGAGAGAGAGAAAGCTGTGGAAGTTAGCTTAGAGAGTTTGAAGCATTTGGAGGAAGAATTAAAAGGAAAAAAATTCTTTGGTGGAGAAGTGATTGGTTTTGCAGATATTGCACTTGGCTGGCTTGCTAATCTGATTAATGTATTGGAGGAAATAAGTGGATCAGTCTTGATTACTGAGGAAAGGTTTCCACAGTTATTCAAATGGACAAAGGAATTTTCTGATGCTCCAATCATCAAAGATAACTGGCCTCCTAGAGATAAACTAGTCACCAAGTTCCAGGCAGTGCATCAGACCTACCTGCAAAAAGAAGCATAA 669 39.46 MGEELKLLRTWSSPFALRIVWALKLKGLEYDTIYEDLGNKSPLLLHFNPIHKKVPVLVHGGKPIAESLIILEYIDETWKQNPLLPQDPYDRAVARFWAQFGDDKVLSSIKEWFISQGKEREKAVEVSLESLKHLEEELKGKKFFGGEVIGFADIALGWLANLINVLEEISGSVLITEERFPQLFKWTKEFSDAPIIKDNWPPRDKLVTKFQAVHQTYLQKEA 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47684223 47685687 + evm.model.ptg000013l.1512 HCH7g1512 548797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1512 222 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
HCH7g1512 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
HCH7g1512 222 SFLD Main (cytGST) 2 220 - -
HCH7g1512 222 FunFam Tau class glutathione S-transferase 1 86 - -
HCH7g1512 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
HCH7g1512 222 FunFam Tau class glutathione S-transferase 84 220 - -
HCH7g1512 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
HCH7g1512 222 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
HCH7g1512 222 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
HCH7g1512 222 Gene3D Glutaredoxin 1 83 - -
HCH7g1512 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
HCH7g1512 222 Pfam Glutathione S-transferase, C-terminal domain 117 192 IPR004046 -
HCH7g1512 222 Gene3D - 84 220 - -
HCH7g1512 222 CDD GST_C_Tau 88 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
HCH7g1512 222 CDD GST_N_Tau 5 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0654 HCH-Chr6:39083865 HCH7g1512 HCH-Chr7:47684223 7.60E-44 dispersed
HCH7g1388 HCH-Chr7:46663404 HCH7g1512 HCH-Chr7:47684223 1.30E-62 dispersed
HCH7g1512 HCH-Chr7:47684223 HCH7g1515 HCH-Chr7:47693578 6.00E-105 dispersed
HCH7g1512 HCH-Chr7:47684223 HCH7g1514 HCH-Chr7:47689892 2.40E-90 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1512 K00799 - csv:101219529 344.354