Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1515 ATGGGAGAAGAATTGAAATTGTTTAGAACGTGGTCAAGTCCATTTGCTTTAAGAATTGTATGGGCATTAAAATTGAAGGGCTTAGAATATGATACCGTTTATGAAGATATGACAAACAAGAGCCCTCTTCTTCTCCAGTATAATCCCATCCACAAGAAGGTTCCTGTGCTCGTTCATGGCGGAAAACCGATCGCCGAATCTCTAATCATCGTCGAATATATAGACGAAATATGGAACCAGAATCCATTGCTGCCTCAAGATCCCTATGAGAGGGCCGTTGCTCGCTTTTGGGCTAAATTTGGAGATGATAAGGTTTTGACATCAATTTGGAAAGTGTTTATGAGCCAAGGAAAAGAGGAGGAAGCCATTGAAGCTGCCTTGGAGAATTTGAAGCATTTGGAGGAATATTTGAAGGGAAAAAAGTTCTTTGGTGGAGAGGTGATTGGGTTTGTAGATATTGCATTTGGCTGGCTTGCTAACTTGGTCAGTGTATTGGAGGAAATTATTGGGCTACCTGTGATCACTGAGGAAAGATTTCCACACTTGTTCAAATGGACAAAGGAATTTGCTGATGCTCCAATCATCAAAGACAACTGGCCTCCTAGAGAGAAACTGGTCACCAAGTTCCAGGCTTACCTGGTGAAAGAAGCATAA 654 41.59 MGEELKLFRTWSSPFALRIVWALKLKGLEYDTVYEDMTNKSPLLLQYNPIHKKVPVLVHGGKPIAESLIIVEYIDEIWNQNPLLPQDPYERAVARFWAKFGDDKVLTSIWKVFMSQGKEEEAIEAALENLKHLEEYLKGKKFFGGEVIGFVDIAFGWLANLVSVLEEIIGLPVITEERFPHLFKWTKEFADAPIIKDNWPPREKLVTKFQAYLVKEA 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47693578 47694734 + evm.model.ptg000013l.1515 HCH7g1515 548800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1515 217 SUPERFAMILY GST C-terminal domain-like 76 212 IPR036282 -
HCH7g1515 217 SFLD Main (cytGST) 2 212 - -
HCH7g1515 217 SFLD Main.3: Omega- and Tau-like 2 212 IPR045073 -
HCH7g1515 217 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
HCH7g1515 217 Gene3D - 84 216 - -
HCH7g1515 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 209 IPR010987 -
HCH7g1515 217 Gene3D Glutaredoxin 1 83 - -
HCH7g1515 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
HCH7g1515 217 FunFam Tau class glutathione S-transferase 84 216 - -
HCH7g1515 217 FunFam Tau class glutathione S-transferase 1 86 - -
HCH7g1515 217 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
HCH7g1515 217 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
HCH7g1515 217 CDD GST_N_Tau 5 78 - -
HCH7g1515 217 CDD GST_C_Tau 88 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
HCH7g1515 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0973 HCH-Chr1:57884611 HCH7g1515 HCH-Chr7:47693578 8.20E-49 dispersed
HCH7g1386 HCH-Chr7:46649666 HCH7g1515 HCH-Chr7:47693578 3.10E-56 dispersed
HCH7g1512 HCH-Chr7:47684223 HCH7g1515 HCH-Chr7:47693578 6.00E-105 dispersed
HCH7g1515 HCH-Chr7:47693578 HCH9g0729 HCH-Chr9:4853678 1.10E-63 dispersed
HCH7g1514 HCH-Chr7:47689892 HCH7g1515 HCH-Chr7:47693578 1.30E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1515 K00799 - csv:101219529 360.918